Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 3.2e-113 411.8 205 100.0
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 3.6e-48 195.7 209 54.5
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 4.8e-45 185.3 209 53.6
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 3.6e-40 169.1 207 48.8
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.9e-35 151.8 205 42.4
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 2.2e-34 149.8 208 42.8
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 2.2e-34 149.8 208 42.8
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 6.5e-34 148.3 205 46.8
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 9.4e-33 144.4 211 45.5
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 2.6e-30 136.3 211 40.8
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 2.8e-29 132.9 209 40.2
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 2.4e-28 129.8 160 46.9
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 2.0e-27 126.7 210 37.1
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 3.5e-27 125.9 201 40.3
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 2.5e-25 119.8 143 47.6
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 3.2e-25 119.4 203 39.4
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 2.7e-24 116.3 129 53.5
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 8.3e-21 104.8 182 36.8
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.0e-18 97.8 191 32.5
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.2e-14 84.3 189 32.3
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 2.6e-14 83.2 124 41.9
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 3.4e-14 82.8 101 47.5
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 2.3e-10 70.1 94 42.6
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 2.3e-10 70.1 94 42.6
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 3.8e-10 69.3 208 28.8
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.6e-08 63.9 75 50.7
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.6e-08 63.9 75 50.7
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 8.0e-08 61.6 91 39.6
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 8.0e-08 61.6 83 43.4
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 1.8e-07 60.5 109 35.8
Lsat_1_v5_gn_5_24721 Lactuca sativa HOM05D001793 ORTHO05D001938 1.5e-06 57.4 82 43.9
Hma1.2p1_1313F.1_g274950 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 2.6e-06 56.6 80 48.8
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 7.5e-06 55.1 126 32.5


User provided reference genes

Program Settings