Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G485.13 Capsicum annuum HOM05D008291 ORTHO05D012653 2.6e-102 375.6 212 100.0
PGSC0003DMG400037196 Solanum tuberosum HOM05D008291 ORTHO05D012653 1.6e-56 223.4 197 62.9
PGSC0003DMG401021786 Solanum tuberosum HOM05D008291 ORTHO05D012653 1.4e-52 210.3 156 73.1
PGSC0003DMG400018828 Solanum tuberosum HOM05D008291 ORTHO05D012653 5.7e-49 198.4 152 70.4
Sopen05g010220 Solanum pennellii HOM05D008291 ORTHO05D012653 4.8e-48 195.3 323 44.9
Solyc12g038430.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 1.4e-47 193.7 262 50.4
Sopen10g007560 Solanum pennellii HOM05D008291 ORTHO05D016169 6.9e-47 191.4 328 43.6
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 3.3e-33 146.0 259 42.1
Solyc09g005280.3 Solanum lycopersicum HOM05D008291 ORTHO05D000669 1.1e-31 141.0 256 41.8
Solyc12g082730.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 1.5e-25 120.6 131 62.6
Solyc04g026080.3 Solanum lycopersicum HOM05D008291 ORTHO05D012653 4.4e-25 119.0 131 61.8
CAN.G987.2 Capsicum annuum HOM05D008291 ORTHO05D012653 2.9e-21 106.3 80 76.2
Sopen03g016170 Solanum pennellii HOM05D008291 ORTHO05D016169 4.7e-19 99.0 194 36.1
Sopen09g022380 Solanum pennellii HOM05D008291 ORTHO05D000669 8.0e-19 98.2 69 68.1
Solyc12g082720.1 Solanum lycopersicum HOM05D008291 ORTHO05D003568 5.7e-17 92.0 61 70.5
CAN.G405.11 Capsicum annuum HOM05D000062 ORTHO05D000043 1.7e-16 90.5 53 81.1
Sopen08g014000 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-14 84.0 131 45.8
CAN.G631.65 Capsicum annuum HOM05D000653 ORTHO05D012653 2.7e-14 83.2 67 71.6
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 4.7e-11 72.4 69 47.8
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 5.2e-10 68.9 218 26.6
Medtr0009s0330 Medicago truncatula HOM05D008291 ORTHO05D003568 2.2e-08 63.5 70 41.4
PGSC0003DMG400046599 Solanum tuberosum HOM05D008291 ORTHO05D012653 2.2e-08 63.5 64 53.1
TPR.G21602 Trifolium pratense HOM05D008291 ORTHO05D003568 8.3e-08 61.6 71 40.8
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 1.1e-07 61.2 65 47.7
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.2e-06 57.8 67 46.3
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 1.6e-06 57.4 65 44.6
Solyc10g050325.2 Solanum lycopersicum HOM05D008291 ORTHO05D012653 2.7e-06 56.6 79 59.5
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 4.6e-06 55.8 65 43.1


User provided reference genes

Program Settings