Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 3.8e-205 718.0 380 100.0
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 4.5e-198 694.5 380 97.4
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 3.8e-197 691.4 380 96.1
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.0e-186 655.2 380 91.6
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 5.0e-181 637.9 380 90.3
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 5.6e-180 634.4 380 86.8
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 4.7e-171 604.7 332 97.3
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 1.9e-159 566.2 381 76.4
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.4e-159 565.8 382 76.2
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 2.7e-158 562.4 380 75.5
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 2.3e-157 559.3 380 73.2
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 1.1e-156 557.0 380 75.0
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 1.5e-156 556.6 380 72.4
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 1.9e-156 556.2 379 73.1
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.5e-156 555.8 381 73.8
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 6.2e-155 551.2 379 73.6
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 8.1e-155 550.8 381 72.7
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 1.1e-154 550.4 380 72.9
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 1.1e-154 550.4 380 71.3
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 4.0e-154 548.5 378 73.0
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.5e-153 546.6 380 72.1
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 3.8e-152 542.0 380 71.1
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.9e-152 541.6 380 71.1
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 2.4e-151 539.3 380 71.6
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 3.2e-151 538.9 380 72.1
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 5.4e-151 538.1 380 71.3
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 4.6e-150 535.0 380 69.5
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 6.0e-150 534.6 381 69.8
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 7.8e-150 534.3 380 70.0
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 6.6e-149 531.2 378 70.6
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 1.5e-148 530.0 381 69.0
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 3.3e-148 528.9 381 69.6
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 3.3e-148 528.9 433 64.4
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 3.3e-148 528.9 381 68.8
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 9.6e-148 527.3 381 68.8
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 9.6e-148 527.3 378 71.2
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 1.6e-147 526.6 380 69.2
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.6e-147 526.6 408 66.2
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 4.7e-147 525.0 381 69.0
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 4.7e-147 525.0 405 67.2
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 6.2e-147 524.6 380 70.8
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 8.1e-147 524.2 390 70.5
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 8.1e-147 524.2 384 69.3
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 4.0e-146 521.9 404 65.8
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 5.2e-146 521.5 410 65.1
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 5.2e-146 521.5 384 69.8
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 2.0e-145 519.6 380 69.7
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 2.0e-145 519.6 381 68.2
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 2.6e-145 519.2 363 73.8
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 4.4e-145 518.5 400 66.5
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 4.4e-145 518.5 384 68.0
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.1e-143 513.8 380 66.3
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.4e-143 513.5 386 67.1
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.4e-143 512.7 380 67.1
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.4e-143 512.7 381 67.7
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 4.2e-143 511.9 380 70.3
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 5.4e-143 511.5 380 66.8
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 7.1e-143 511.1 381 68.0
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 7.1e-143 511.1 435 61.6
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 1.2e-142 510.4 433 64.4
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 1.2e-142 510.4 380 66.6
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 3.5e-142 508.8 380 67.4
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 6.6e-141 504.6 374 66.6
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 2.5e-140 502.7 380 65.8
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 4.8e-139 498.4 385 66.2
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.8e-139 498.4 390 64.1
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.1e-139 497.7 380 65.8
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 3.1e-138 495.7 380 64.5
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 4.0e-138 495.4 357 70.9
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 9.0e-138 494.2 383 66.3
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.2e-137 493.8 380 65.3
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.5e-137 493.4 380 65.0
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 3.4e-137 492.3 383 65.5
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 3.4e-137 492.3 380 64.5
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 3.4e-137 492.3 381 66.9
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 9.9e-137 490.7 380 64.5
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.9e-136 489.2 378 64.3
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 2.9e-136 489.2 376 64.4
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.1e-135 487.3 380 64.5
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 1.9e-135 486.5 380 64.2
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 1.2e-134 483.8 380 64.2
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 6.0e-134 481.5 381 64.3
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 6.0e-134 481.5 381 64.6
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.3e-133 479.6 381 63.3
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 3.0e-133 479.2 381 64.3
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 6.7e-133 478.0 381 63.5
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 6.7e-133 478.0 381 63.5
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.6e-131 473.4 387 62.5
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 2.4e-130 469.5 398 61.6
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 9.0e-130 467.6 411 59.1
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 3.4e-129 465.7 460 54.6
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 4.9e-128 461.8 389 62.0
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 9.3e-127 457.6 323 69.7
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 7.9e-126 454.5 380 60.5
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 3.1e-122 442.6 387 60.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 3.4e-121 439.1 383 59.3
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 6.5e-120 434.9 383 60.6
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.4e-119 433.7 380 60.5
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 9.3e-119 431.0 383 60.8
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.6e-118 430.3 380 58.9
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 2.2e-115 419.9 277 78.3
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.0e-109 401.0 414 54.1
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 6.3e-107 391.7 388 53.1
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 6.9e-106 388.3 278 71.2
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 1.5e-100 370.5 391 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 3.3e-71 273.1 414 39.1
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 3.6e-70 269.6 245 57.1
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 4.1e-66 256.1 461 38.0
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 9.8e-60 235.0 159 72.3
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.4e-58 230.3 159 71.7
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-57 228.0 162 70.4
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.0e-48 198.4 149 66.4
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 3.3e-47 193.4 341 36.1
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.1e-46 190.7 162 61.1
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.9e-42 177.6 129 65.9
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 9.5e-39 165.2 140 54.3
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 9.5e-39 165.2 123 66.7
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 6.0e-33 146.0 102 64.7
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 1.1e-31 141.7 110 70.9
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 2.0e-28 131.0 103 60.2
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.8e-21 107.8 84 64.3
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.9e-19 99.8 96 58.3
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 8.4e-11 72.4 124 37.9
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 7.9e-09 65.9 39 79.5
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 1.8e-08 64.7 39 76.9


User provided reference genes

Program Settings