Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 7.8e-201 703.7 397 100.0
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.4e-111 406.0 433 63.3
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 7.0e-109 398.3 434 63.6
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 7.7e-108 394.8 433 62.8
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 6.6e-107 391.7 436 61.0
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.0e-104 384.4 431 60.1
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 9.2e-101 371.3 432 58.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.6e-44 184.5 422 36.3
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 4.6e-44 183.0 368 40.2
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 3.3e-42 176.8 347 40.6
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 7.4e-42 175.6 378 37.6
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 2.1e-41 174.1 388 37.4
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 2.4e-40 170.6 324 39.8
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 9.0e-40 168.7 356 39.6
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-39 167.9 394 37.6
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.5e-39 167.9 392 37.5
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 3.4e-39 166.8 379 37.7
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.9e-38 163.7 417 36.7
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 3.8e-38 163.3 413 35.8
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 1.1e-37 161.8 391 37.6
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 9.3e-37 158.7 386 37.3
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.7e-36 157.1 377 36.3
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 4.6e-36 156.4 387 36.7
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 6.1e-36 156.0 387 37.0
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 1.0e-35 155.2 291 39.9
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.3e-35 154.1 369 37.7
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 8.7e-35 152.1 368 35.3
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 8.7e-35 152.1 357 37.0
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 8.7e-35 152.1 430 33.3
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 2.2e-33 147.5 379 34.3
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 8.2e-33 145.6 386 35.5
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 5.3e-32 142.9 376 37.5
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 6.9e-32 142.5 407 35.4
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 9.0e-32 142.1 375 36.8
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 4.5e-31 139.8 336 36.9
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 7.7e-31 139.0 416 31.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 1.0e-30 138.7 375 33.6
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 1.0e-30 138.7 344 36.9
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 2.2e-30 137.5 353 35.4
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 6.5e-30 136.0 373 33.0
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 3.2e-29 133.7 383 34.2
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 1.6e-28 131.3 403 34.0
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 1.6e-28 131.3 344 36.0
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.7e-28 130.6 388 34.3
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.7e-28 130.6 405 32.1
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 6.1e-28 129.4 388 34.5
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 1.8e-27 127.9 384 33.9
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.3e-27 127.5 354 33.3
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.3e-27 127.5 356 33.4
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.3e-27 127.5 364 34.1
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 3.0e-27 127.1 373 34.0
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 3.0e-27 127.1 362 32.3
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 5.1e-27 126.3 416 32.9
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.1e-26 125.2 400 32.0
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.5e-26 124.8 382 34.6
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.0e-26 124.4 313 37.1
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 2.5e-26 124.0 424 33.5
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 2.5e-26 124.0 431 32.0
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 4.3e-26 123.2 425 31.3
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 4.3e-26 123.2 425 31.3
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 4.3e-26 123.2 372 33.3
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 5.7e-26 122.9 321 37.1
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 5.7e-26 122.9 402 32.8
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 9.7e-26 122.1 403 34.7
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 9.7e-26 122.1 392 34.4
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.7e-25 121.3 406 32.0
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 2.8e-25 120.6 443 31.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 3.7e-25 120.2 356 32.3
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 6.3e-25 119.4 406 31.0
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.1e-24 118.6 381 33.6
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.4e-24 118.2 357 33.1
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 1.8e-24 117.9 424 30.9
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 1.8e-24 117.9 418 30.4
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 2.4e-24 117.5 431 30.9
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 2.4e-24 117.5 426 30.5
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 2.4e-24 117.5 362 33.1
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 3.1e-24 117.1 409 32.5
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 4.1e-24 116.7 320 34.7
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 4.1e-24 116.7 429 30.1
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 5.3e-24 116.3 371 33.4
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-23 114.8 368 34.0
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.6e-23 114.0 358 33.5
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 3.4e-23 113.6 403 29.8
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 3.4e-23 113.6 399 31.6
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 2.9e-22 110.5 419 29.6
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.1e-21 108.6 425 29.9
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.4e-21 108.2 399 31.6
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.9e-21 107.8 371 31.5
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 4.2e-21 106.7 271 35.4
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 8.8e-19 99.0 357 28.6
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 3.3e-18 97.1 416 29.3
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 4.4e-18 96.7 272 31.6
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 9.7e-18 95.5 313 34.8
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.7e-17 94.7 366 31.4
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 8.2e-17 92.4 347 29.7
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 2.4e-16 90.9 349 32.4
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 2.4e-16 90.9 113 47.8
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.2e-15 88.6 351 29.9
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 1.5e-15 88.2 402 30.8
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 2.0e-15 87.8 348 31.9
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 2.0e-15 87.8 347 32.9
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 2.6e-15 87.4 398 29.1
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.6e-15 87.4 405 30.6
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.3e-14 85.1 400 28.0
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.3e-14 85.1 415 27.0
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.7e-14 84.7 120 41.7
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.2e-14 84.3 242 32.6
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.5e-13 81.6 125 45.6
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.5e-13 81.6 357 33.1
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 2.1e-12 77.8 354 27.4
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 4.7e-12 76.6 407 30.7
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.4e-11 75.1 289 32.2
CAN.G162.97 Capsicum annuum HOM05D005773 ORTHO05D006930 7.5e-10 69.3 63 60.3
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 9.7e-10 68.9 113 45.1
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 8.2e-09 65.9 121 47.1
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 1.4e-08 65.1 154 40.3
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.8e-08 64.7 128 43.8
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 9.1e-08 62.4 48 56.2
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-07 62.0 317 30.0
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.9e-07 59.7 80 42.5
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 1.7e-06 58.2 82 39.0
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 2.9e-06 57.4 54 48.1
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 6.5e-06 56.2 45 55.6


User provided reference genes

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