Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 6.7e-55 217.2 121 100.0
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 2.8e-45 185.3 121 76.0
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-44 183.3 121 76.0
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.4e-44 183.0 121 76.0
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 1.4e-44 183.0 121 75.2
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 4.1e-44 181.4 121 74.4
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 77.7
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 2.5e-41 172.2 121 72.7
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.5e-41 170.2 121 68.6
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 1.2e-40 169.9 114 74.6
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 2.8e-40 168.7 121 67.8
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 2.8e-40 168.7 121 77.7
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 6.1e-40 167.5 121 74.4
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.1e-40 167.5 121 74.4
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.1e-40 167.5 121 74.4
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 6.1e-40 167.5 114 72.8
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.0e-39 166.8 121 73.6
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 2.3e-39 165.6 118 70.3
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 3.0e-39 165.2 121 66.9
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 5.2e-39 164.5 121 68.6
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 6.8e-39 164.1 121 66.1
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 1.2e-38 163.3 114 69.3
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 1.2e-38 163.3 121 66.1
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.2e-38 163.3 118 66.1
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.2e-38 163.3 118 69.5
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.5e-38 162.9 121 73.6
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 1.5e-38 162.9 121 68.6
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 2.0e-38 162.5 121 69.4
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 2.0e-38 162.5 121 67.8
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.6e-38 162.2 121 66.1
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 3.4e-38 161.8 121 67.8
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 4.4e-38 161.4 114 76.3
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 9.8e-38 160.2 121 66.1
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.7e-37 159.5 121 66.1
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.7e-37 159.5 121 66.1
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 3.7e-37 158.3 121 65.3
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 4.9e-37 157.9 112 71.4
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.3e-37 157.5 121 71.9
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 6.3e-37 157.5 109 68.8
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.3e-37 157.5 121 72.7
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 8.3e-37 157.1 121 66.1
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.1e-36 156.8 121 66.1
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.4e-36 156.4 121 62.8
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 1.8e-36 156.0 116 67.2
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 2.4e-36 155.6 112 71.4
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 2.4e-36 155.6 110 71.8
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 2.4e-36 155.6 121 63.6
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 4.1e-36 154.8 121 64.5
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 4.1e-36 154.8 112 67.9
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 4.1e-36 154.8 116 66.4
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 5.4e-36 154.5 121 65.3
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 5.4e-36 154.5 121 62.8
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 5.4e-36 154.5 112 67.0
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 7.0e-36 154.1 121 72.7
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 9.2e-36 153.7 146 61.6
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 1.2e-35 153.3 121 72.7
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.7e-35 152.1 114 66.7
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 2.7e-35 152.1 121 62.8
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 5.9e-35 151.0 115 66.1
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 7.8e-35 150.6 121 62.0
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-34 149.8 115 64.3
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.7e-34 149.4 112 66.1
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.7e-34 149.4 114 65.8
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 3.8e-34 148.3 101 72.3
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 1.5e-33 146.4 112 61.6
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 1.9e-33 146.0 109 66.1
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 2.5e-33 145.6 114 66.7
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 4.3e-33 144.8 114 66.7
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 4.3e-33 144.8 114 66.7
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 4.3e-33 144.8 114 66.7
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 4.3e-33 144.8 104 69.2
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 7.3e-33 144.1 112 66.1
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 7.3e-33 144.1 121 62.0
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 9.5e-33 143.7 114 66.7
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 9.5e-33 143.7 114 66.7
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 66.7
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 66.7
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 66.7
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 66.7
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.2e-32 143.3 110 66.4
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 65.8
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 1.2e-32 143.3 114 61.4
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 1.6e-32 142.9 104 72.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.6e-32 142.9 119 62.2
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 2.1e-32 142.5 115 64.3
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 3.6e-32 141.7 111 62.2
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 6.1e-32 141.0 115 64.3
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 6.1e-32 141.0 114 59.6
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 8.0e-32 140.6 105 67.6
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 1.4e-31 139.8 104 64.4
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 2.6e-30 135.6 104 66.3
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 4.4e-30 134.8 114 60.5
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 4.4e-30 134.8 104 64.4
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 7.5e-30 134.0 94 68.1
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 7.5e-30 134.0 112 60.7
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 9.8e-30 133.7 107 62.6
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.8e-30 133.7 108 60.2
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 1.3e-29 133.3 110 67.3
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 2.2e-29 132.5 104 59.6
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 8.3e-29 130.6 104 59.6
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 2.4e-28 129.0 95 67.4
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 3.2e-28 128.6 89 71.9
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 3.2e-28 128.6 103 59.2
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 4.1e-28 128.3 105 62.9
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 4.1e-28 128.3 104 63.5
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 4.1e-28 128.3 110 56.4
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 5.4e-28 127.9 104 59.6
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 7.0e-28 127.5 109 61.5
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 9.2e-28 127.1 110 60.0
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 9.2e-28 127.1 103 58.3
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 1.2e-27 126.7 108 58.3
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.2e-27 126.7 89 71.9
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.2e-27 126.7 91 68.1
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.6e-27 126.3 104 63.5
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 2.0e-27 125.9 96 62.5
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 2.0e-27 125.9 98 63.3
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 4.6e-27 124.8 95 66.3
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 1.3e-26 123.2 95 65.3
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.3e-26 123.2 112 54.5
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.7e-26 122.9 109 55.0
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 3.0e-26 122.1 83 72.3
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 9.5e-25 117.1 126 53.2
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 9.5e-25 117.1 95 57.9
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 4.7e-24 114.8 96 57.3
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 7.5e-22 107.5 103 56.3
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 1.3e-21 106.7 93 57.0
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.6e-19 99.8 109 45.9
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.1e-17 93.6 109 47.7
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 2.5e-17 92.4 75 66.7
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.6e-16 88.6 70 62.9
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 9.8e-14 80.5 62 67.7
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 2.9e-13 79.0 100 44.0
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.6e-11 73.2 79 49.4
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.3e-10 69.3 109 38.5
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.6e-09 64.7 66 48.5
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 1.6e-08 63.2 43 62.8
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.4e-07 60.1 81 42.0
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 2.6e-06 55.8 99 31.3


User provided reference genes

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