Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 4.0e-215 751.1 373 100.0
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 5.1e-186 654.4 374 87.4
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 7.4e-185 650.6 375 87.7
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 3.5e-179 631.7 373 85.3
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 4.3e-177 624.8 373 83.9
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 2.2e-157 559.3 386 75.9
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 1.7e-152 543.1 381 71.7
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.4e-151 540.0 381 71.9
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.1e-151 538.9 381 70.9
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 6.9e-151 537.7 381 70.6
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 9.1e-151 537.3 382 71.5
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 1.5e-150 536.6 379 70.4
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 2.1e-147 526.2 376 71.5
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 4.7e-147 525.0 374 72.5
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.8e-146 520.8 360 73.6
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 8.8e-146 520.8 360 73.6
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 2.0e-145 519.6 297 84.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 2.6e-145 519.2 353 73.9
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.6e-145 519.2 360 73.3
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 3.3e-145 518.8 385 69.4
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 9.7e-145 517.3 348 73.6
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 2.8e-144 515.8 304 80.3
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 6.3e-144 514.6 374 69.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 8.2e-144 514.2 377 71.1
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 1.1e-143 513.8 305 81.3
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 1.8e-143 513.1 360 71.9
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.8e-143 513.1 371 70.6
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 4.1e-143 511.9 312 78.8
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 4.1e-143 511.9 377 68.2
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 5.3e-143 511.5 338 73.1
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 5.3e-143 511.5 305 81.3
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 7.0e-143 511.1 355 73.0
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.2e-142 510.4 296 80.7
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 2.0e-142 509.6 355 72.7
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.0e-142 509.6 371 71.2
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 4.5e-142 508.4 358 72.3
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 5.9e-142 508.1 382 68.3
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 1.0e-141 507.3 378 69.3
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 1.0e-141 507.3 373 69.2
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 1.7e-141 506.5 378 68.0
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 1.7e-141 506.5 386 67.4
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.7e-141 506.5 382 66.8
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 2.2e-141 506.1 295 82.0
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 2.2e-141 506.1 305 79.0
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 2.2e-141 506.1 306 80.7
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.9e-141 505.8 296 79.7
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 2.9e-141 505.8 307 79.5
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 2.9e-141 505.8 316 74.7
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 1.1e-140 503.8 347 72.6
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 1.5e-140 503.4 383 68.1
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 1.9e-140 503.1 372 67.2
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 1.9e-140 503.1 305 78.7
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.5e-140 502.7 296 79.7
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.5e-140 502.7 376 67.6
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 3.2e-140 502.3 296 80.1
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 4.2e-140 501.9 296 79.4
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 4.2e-140 501.9 296 80.1
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 5.5e-140 501.5 300 78.7
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 5.5e-140 501.5 352 71.0
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 5.5e-140 501.5 352 71.0
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 5.5e-140 501.5 377 67.9
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 5.5e-140 501.5 374 66.6
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 7.2e-140 501.1 303 76.6
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 1.2e-139 500.4 300 80.0
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.2e-139 500.4 362 69.6
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 1.6e-139 500.0 328 74.4
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 3.6e-139 498.8 296 79.4
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 4.7e-139 498.4 296 78.7
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 4.7e-139 498.4 377 67.6
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 6.1e-139 498.0 382 67.0
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 6.1e-139 498.0 316 75.0
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 1.4e-138 496.9 295 80.7
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 3.0e-138 495.7 336 71.1
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 5.2e-138 495.0 340 72.9
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 1.2e-137 493.8 292 78.8
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 1.5e-137 493.4 335 71.0
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 2.0e-137 493.0 369 69.1
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 3.3e-137 492.3 292 78.1
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 3.3e-137 492.3 291 79.4
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 9.7e-137 490.7 377 67.9
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.3e-136 490.3 294 80.3
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 2.2e-136 489.6 381 67.2
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 2.2e-136 489.6 428 60.0
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 8.2e-136 487.6 338 69.8
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.1e-135 487.3 374 67.4
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 3.1e-135 485.7 408 64.5
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 7.0e-135 484.6 298 77.2
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 1.6e-134 483.4 297 76.8
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 1.3e-133 480.3 316 72.2
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 1.3e-133 480.3 353 67.7
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 1.1e-132 477.2 330 69.7
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 1.8e-130 469.9 388 62.4
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.7e-128 463.4 349 66.8
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 6.3e-128 461.5 283 77.7
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 7.7e-126 454.5 432 57.2
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.9e-125 452.6 373 62.2
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.6e-123 446.8 299 70.2
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 4.1e-119 432.2 335 65.1
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 7.0e-119 431.4 306 67.6
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 7.0e-119 431.4 293 68.6
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.6e-118 430.3 291 68.0
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.7e-118 429.5 291 67.4
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.0e-117 427.6 291 67.7
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 1.3e-117 427.2 267 81.6
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 3.8e-117 425.6 293 67.9
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 3.6e-115 419.1 229 86.9
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 4.3e-108 395.6 439 54.0
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 7.8e-94 348.2 292 60.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 3.3e-92 342.8 243 70.4
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 4.3e-92 342.4 182 86.3
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 1.2e-83 314.3 213 73.7
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 9.0e-82 308.1 215 67.4
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 1.6e-78 297.4 271 60.5
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 2.7e-78 296.6 262 60.7
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 8.1e-75 285.0 201 69.2
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 2.4e-71 273.5 325 49.5
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.5e-47 193.7 239 49.8
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 2.9e-24 117.1 153 47.7
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 3.8e-24 116.7 153 47.1
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 1.4e-21 108.2 94 57.4
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 3.8e-16 90.1 63 66.7
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 3.5e-09 67.0 36 75.0


User provided reference genes

Program Settings