Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G484.119 Capsicum annuum HOM05D003294 ORTHO05D017749 1.1e-48 199.1 300 100.0
CAN.G484.120 Capsicum annuum HOM05D003294 ORTHO05D004060 1.6e-18 99.0 57 98.2
Nitab4.5_0002252g0100 Nicotiana tabacum HOM05D003294 ORTHO05D017749 3.0e-17 94.7 56 91.1
Nitab4.5_0000383g0230 Nicotiana tabacum HOM05D003294 ORTHO05D004060 4.0e-17 94.4 56 92.9
Nitab4.5_0000383g0350 Nicotiana tabacum HOM05D003294 ORTHO05D004060 4.0e-17 94.4 56 92.9
CAN.G484.118 Capsicum annuum HOM05D003294 ORTHO05D004060 1.2e-16 92.8 56 91.1
Peaxi162Scf00323g00620 Petunia axillaris HOM05D003294 ORTHO05D004060 1.2e-16 92.8 57 86.0
Sopen12g033530 Solanum pennellii HOM05D003294 ORTHO05D004060 2.0e-16 92.0 57 93.0
CAN.G484.117 Capsicum annuum HOM05D003294 ORTHO05D004060 2.6e-16 91.7 57 93.0
Sopen12g033540 Solanum pennellii HOM05D003294 ORTHO05D004060 2.6e-16 91.7 57 91.2
CAN.G484.121 Capsicum annuum HOM05D003294 ORTHO05D004060 3.4e-16 91.3 47 91.5
Sopen12g033520 Solanum pennellii HOM05D003294 ORTHO05D004060 4.4e-16 90.9 57 89.5
CAN.G484.123 Capsicum annuum HOM05D003294 ORTHO05D017749 4.9e-15 87.4 57 78.9
Solyc12g098800.2 Solanum lycopersicum HOM05D003294 ORTHO05D017749 6.3e-15 87.0 47 89.4
Sopen12g033510 Solanum pennellii HOM05D003294 ORTHO05D004060 1.4e-14 85.9 57 84.2
Nitab4.5_0002908g0110 Nicotiana tabacum HOM05D003294 ORTHO05D017749 9.2e-14 83.2 57 86.0
Solyc12g098780.2 Solanum lycopersicum HOM05D003294 ORTHO05D004060 1.2e-13 82.8 57 82.5
PGSC0003DMG400004676 Solanum tuberosum HOM05D003294 ORTHO05D004060 2.7e-13 81.6 57 84.2
Solyc12g038860.1 Solanum lycopersicum HOM05D003294 ORTHO05D017749 3.5e-13 81.3 57 68.4
Peaxi162Scf00323g00521 Petunia axillaris HOM05D003294 ORTHO05D004060 4.6e-13 80.9 57 86.0
PGSC0003DMG400002364 Solanum tuberosum HOM05D003294 ORTHO05D004060 5.9e-13 80.5 57 73.7
Peaxi162Scf00378g00826 Petunia axillaris HOM05D003294 ORTHO05D004060 1.0e-12 79.7 57 84.2
Peaxi162Scf00378g00828 Petunia axillaris HOM05D003294 ORTHO05D004060 1.0e-12 79.7 57 84.2
Peaxi162Scf39387g00001 Petunia axillaris HOM05D003294 ORTHO05D017749 1.0e-12 79.7 57 84.2
Nitab4.5_0001049g0140 Nicotiana tabacum HOM05D003294 ORTHO05D004060 2.9e-12 78.2 57 80.7
Sopen12g033500 Solanum pennellii HOM05D003294 ORTHO05D004060 3.9e-12 77.8 57 82.5
CAN.G484.124 Capsicum annuum HOM05D003294 ORTHO05D017749 6.6e-12 77.0 57 80.7
Peaxi162Scf00323g00618 Petunia axillaris HOM05D003294 ORTHO05D004060 9.5e-11 73.2 57 77.2
PGSC0003DMG400004675 Solanum tuberosum HOM05D003294 ORTHO05D004060 9.5e-11 73.2 57 78.9
Sopen12g018920 Solanum pennellii HOM05D003294 ORTHO05D004060 1.6e-10 72.4 57 64.9
Peaxi162Scf00323g00064 Petunia axillaris HOM05D003294 ORTHO05D017749 8.0e-10 70.1 57 77.2
Peaxi162Scf00286g00022 Petunia axillaris HOM05D003294 ORTHO05D004060 3.1e-09 68.2 42 81.0
Oeu006702.1 Olea europaea HOM05D003294 ORTHO05D004060 1.5e-08 65.9 44 75.0
Dinv22670 Davidia involucrata HOM05D003294 ORTHO05D004060 2.0e-08 65.5 58 72.4
PGSC0003DMG400021603 Solanum tuberosum HOM05D003294 ORTHO05D004060 2.6e-08 65.1 44 72.7
CSS0007766 Camellia sinensis var. sinensis HOM05D003294 ORTHO05D004060 4.4e-08 64.3 44 70.5
MSTRG.24590 Avicennia marina HOM05D003294 ORTHO05D004060 7.5e-08 63.5 45 77.8
Dinv44225 Davidia involucrata HOM05D003294 ORTHO05D004060 9.8e-08 63.2 46 71.7
Actinidia35893 Actinidia chinensis HOM05D003294 ORTHO05D004060 2.2e-07 62.0 44 65.9
Actinidia17219 Actinidia chinensis HOM05D003294 ORTHO05D004060 2.9e-07 61.6 44 68.2
Solyc09g098510.3 Solanum lycopersicum HOM05D003294 ORTHO05D393108 3.7e-07 61.2 43 67.4
Sopen09g036430 Solanum pennellii HOM05D003294 ORTHO05D004060 3.7e-07 61.2 43 67.4
CAN.G710.61 Capsicum annuum HOM05D003294 ORTHO05D004060 4.9e-07 60.8 68 67.6
Actinidia35892 Actinidia chinensis HOM05D003294 ORTHO05D004060 7.0e-06 57.0 44 63.6


User provided reference genes

Program Settings