Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G481.47 Capsicum annuum HOM05D006582 ORTHO05D008313 8.5e-160 567.0 297 100.0
Sopen03g022560 Solanum pennellii HOM05D006582 ORTHO05D008313 2.7e-150 535.4 297 93.6
PGSC0003DMG402018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 6.8e-149 530.8 297 92.9
Solyc03g082820.3 Solanum lycopersicum HOM05D006582 ORTHO05D008313 1.2e-148 530.0 297 92.6
Peaxi162Scf00740g00331 Petunia axillaris HOM05D006582 ORTHO05D008313 1.3e-139 500.0 297 87.5
SGA_v2.0_scaffold18G08434 Striga asiatica HOM05D006582 ORTHO05D008313 1.7e-128 463.0 297 80.5
Actinidia34241 Actinidia chinensis HOM05D006582 ORTHO05D008313 2.3e-128 462.6 297 79.5
Hma1.2p1_0415F.1_g148010 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.5e-127 459.1 297 78.8
Dinv29249 Davidia involucrata HOM05D006582 ORTHO05D008313 3.3e-127 458.8 297 79.5
Migut.F00182 Erythranthe guttata HOM05D006582 ORTHO05D008313 1.6e-126 456.4 297 78.5
CSS0043436 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 1.8e-125 453.0 297 77.8
SalBow4G1606 Salvia bowleyana HOM05D006582 ORTHO05D008313 4.0e-125 451.8 297 77.1
CSS0003388 Camellia sinensis var. sinensis HOM05D006582 ORTHO05D008313 5.2e-125 451.4 297 77.4
Cc04_g16300 Coffea canephora HOM05D006582 ORTHO05D008313 3.4e-124 448.7 297 76.8
Rhsim03G0211600 Rhododendron simsii HOM05D006582 ORTHO05D008313 7.5e-124 447.6 297 77.1
Thecc.03G203200 Theobroma cacao HOM05D006582 ORTHO05D008313 2.2e-123 446.0 312 75.3
Prupe.2G171600 Prunus persica HOM05D006582 ORTHO05D008313 2.4e-122 442.6 301 76.1
Lj3A900T44 Lonicera japonica HOM05D006582 ORTHO05D008313 3.2e-122 442.2 297 75.1
GSVIVG01038593001 Vitis vinifera HOM05D006582 ORTHO05D008313 3.2e-122 442.2 300 75.3
Gorai.004G122700 Gossypium raimondii HOM05D006582 ORTHO05D008313 1.2e-121 440.3 312 74.7
Gohir.D08G113800 Gossypium hirsutum HOM05D006582 ORTHO05D008313 2.1e-121 439.5 312 74.0
COL.COLO4_16812 Corchorus olitorius HOM05D006582 ORTHO05D008313 4.6e-121 438.3 312 73.4
PGR142G1628 Punica granatum HOM05D006582 ORTHO05D008313 6.0e-121 438.0 303 74.6
Cfa016201 Carpinus fangiana HOM05D006582 ORTHO05D008313 7.8e-121 437.6 303 74.3
RcHm_v2.0_Chr1g0355871 Rosa chinensis HOM05D006582 ORTHO05D008313 1.0e-120 437.2 300 74.7
FAN03G0584 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-120 436.8 300 75.0
FAN06G3963 Fragaria x ananassa HOM05D006582 ORTHO05D008313 1.3e-120 436.8 300 74.7
THA.LOC104811904 Tarenaya hassleriana HOM05D006582 ORTHO05D008313 1.3e-120 436.8 304 73.0
FvH4_7g14460 Fragaria vesca HOM05D006582 ORTHO05D008313 2.3e-120 436.0 300 74.7
FAN06G2233 Fragaria x ananassa HOM05D006582 ORTHO05D008313 2.3e-120 436.0 300 74.7
MD07G1135900 Malus domestica HOM05D006582 ORTHO05D008313 2.3e-120 436.0 300 74.7
FAN01G0099 Fragaria x ananassa HOM05D006582 ORTHO05D008313 5.1e-120 434.9 300 74.3
Duzib068G0295 Durio zibethinus HOM05D006582 ORTHO05D008313 8.6e-120 434.1 312 72.4
unitig_747.g21740 Utricularia gibba HOM05D006582 ORTHO05D008313 4.3e-119 431.8 297 72.7
Nitab4.5_0002780g0150 Nicotiana tabacum HOM05D006582 ORTHO05D008313 5.6e-119 431.4 315 74.6
TAR374G0762 Trochodendron aralioides HOM05D006582 ORTHO05D008313 5.6e-119 431.4 298 73.5
HanXRQChr07g0206401 Helianthus annuus HOM05D006582 ORTHO05D008313 7.3e-119 431.0 296 74.3
Lsat_1_v5_gn_2_135281 Lactuca sativa HOM05D006582 ORTHO05D008313 7.3e-119 431.0 300 73.3
Ciclev10021376m.g Citrus clementina HOM05D006582 ORTHO05D008313 3.6e-118 428.7 300 73.7
CsaV3_5G000310 Cucumis sativus L. HOM05D006582 ORTHO05D008313 4.7e-118 428.3 305 72.5
Ah.07g205040 Amaranthus hybridus HOM05D006582 ORTHO05D008313 6.2e-118 427.9 272 77.6
CiPaw.06G044200 Carya illinoinensis HOM05D006582 ORTHO05D008313 8.1e-118 427.6 302 72.5
Sabra15G0024300 Salix brachista HOM05D006582 ORTHO05D008313 1.1e-117 427.2 309 71.2
Sed0002968 Sechium edule HOM05D006582 ORTHO05D008313 1.1e-117 427.2 306 71.6
CANSAT21G1996 Cannabis sativa HOM05D006582 ORTHO05D008313 2.3e-117 426.0 302 73.5
AUR62035580 Chenopodium quinoa HOM05D006582 ORTHO05D008313 3.1e-117 425.6 292 71.9
MELO3C005901.2 Cucumis melo HOM05D006582 ORTHO05D008313 4.0e-117 425.2 305 72.1
Manes.01G148600 Manihot esculenta HOM05D006582 ORTHO05D008313 2.0e-116 422.9 301 73.4
arahy.Tifrunner.gnm1.ann1.AV4C6H Arachis hypogaea HOM05D006582 ORTHO05D008313 2.6e-116 422.5 302 72.2
arahy.Tifrunner.gnm1.ann1.D33ADG Arachis hypogaea HOM05D006582 ORTHO05D008313 2.6e-116 422.5 302 72.2
EL10Ac3g05224 Beta vulgaris HOM05D006582 ORTHO05D008313 3.4e-116 422.2 272 75.7
Phvul.011G018800 Phaseolus vulgaris HOM05D006582 ORTHO05D008313 7.5e-116 421.0 301 71.8
vmacro06405 Vaccinium macrocarpon HOM05D006582 ORTHO05D008313 7.5e-116 421.0 343 66.2
Nitab4.5_0007755g0010 Nicotiana tabacum HOM05D006582 ORTHO05D008313 1.3e-115 420.2 337 69.4
Aa31LG3G9690 Aethionema arabicum HOM05D006582 ORTHO05D008313 1.7e-115 419.9 306 69.6
QL09p007748 Quercus lobata HOM05D006582 ORTHO05D008313 1.7e-115 419.9 308 72.1
AUR62006048 Chenopodium quinoa HOM05D006582 ORTHO05D008313 2.9e-115 419.1 269 76.2
Haze_00249 Corylus avellana HOM05D006582 ORTHO05D008313 2.9e-115 419.1 331 67.7
Haze_00255 Corylus avellana HOM05D006582 ORTHO05D008313 2.9e-115 419.1 331 67.7
Thhalv10025816m.g Eutrema salsugineum HOM05D006582 ORTHO05D008313 2.9e-115 419.1 306 69.9
BcaNung01623 Brassica carinata HOM05D006582 ORTHO05D008313 8.3e-115 417.5 306 70.3
BcaC09g50542 Brassica carinata HOM05D006582 ORTHO05D008313 1.4e-114 416.8 306 70.3
TWI60G0746 Tripterygium wilfordii HOM05D006582 ORTHO05D008313 1.4e-114 416.8 275 77.5
A01p19210 Brassica napus HOM05D006582 ORTHO05D008313 2.4e-114 416.0 306 69.9
Carub.0007s1306 Capsella rubella HOM05D006582 ORTHO05D008313 2.4e-114 416.0 306 69.6
C01p24110 Brassica napus HOM05D006582 ORTHO05D008313 3.2e-114 415.6 306 70.3
Glyma.11G108800 Glycine max HOM05D006582 ORTHO05D008313 3.2e-114 415.6 310 70.6
BraA01t01863Z Brassica rapa HOM05D006582 ORTHO05D008313 4.1e-114 415.2 306 69.9
Nn6g34389 Nelumbo nucifera HOM05D006582 ORTHO05D008313 5.4e-114 414.8 300 70.7
Sp7g25720 Schrenkiella parvula HOM05D006582 ORTHO05D008313 5.4e-114 414.8 306 69.3
VMungo1127G0470 Vigna mungo HOM05D006582 ORTHO05D008313 7.1e-114 414.5 300 71.3
AT4G27750 Arabidopsis thaliana HOM05D006582 ORTHO05D008313 9.2e-114 414.1 306 69.0
Sc19g0000750 Simmondsia chinensis HOM05D006582 ORTHO05D008313 1.6e-113 413.3 272 74.6
Aqoxy7G00041 Aquilegia oxysepala HOM05D006582 ORTHO05D008313 3.5e-113 412.1 302 70.5
AL7G24900 Arabidopsis lyrata HOM05D006582 ORTHO05D008313 3.5e-113 412.1 307 68.7
CARHR235480 Cardamine hirsuta HOM05D006582 ORTHO05D008313 4.6e-113 411.8 306 69.0
Glyma.12G016600 Glycine max HOM05D006582 ORTHO05D008313 6.0e-113 411.4 302 71.2
Lj3g0025694 Lotus japonicus HOM05D006582 ORTHO05D008313 8.6e-112 407.5 303 70.6
DCAR_008960 Daucus carota HOM05D006582 ORTHO05D008313 4.3e-111 405.2 272 74.6
Hund11634 Selenicereus undatus HOM05D006582 ORTHO05D008313 5.6e-111 404.8 271 72.0
BolC1t02368H Brassica oleracea HOM05D006582 ORTHO05D008313 2.8e-110 402.5 335 64.5
Ca_18952_v3 Cicer arietinum L. HOM05D006582 ORTHO05D008313 4.7e-110 401.7 305 68.9
PSO782G4269 Papaver somniferum HOM05D006582 ORTHO05D008313 1.4e-109 400.2 296 68.2
TPR.G19615 Trifolium pratense HOM05D006582 ORTHO05D008313 3.1e-109 399.1 305 67.5
Medtr4g078140 Medicago truncatula HOM05D006582 ORTHO05D008313 5.2e-109 398.3 307 68.7
Psat7g170040 Pisum sativum HOM05D006582 ORTHO05D008313 1.5e-108 396.7 305 67.5
Hund21029 Selenicereus undatus HOM05D006582 ORTHO05D008313 1.3e-107 393.7 271 72.7
MD01G1064000 Malus domestica HOM05D006582 ORTHO05D008313 3.8e-107 392.1 319 67.7
Lalb_Chr03g0024361 Lupinus albus HOM05D006582 ORTHO05D008313 8.4e-107 391.0 306 67.6
ECA238G3804 Erigeron canadensis HOM05D006582 ORTHO05D008313 1.1e-106 390.6 278 74.8
SGA_v2.0_scaffold44G16825 Striga asiatica HOM05D006582 ORTHO05D008313 2.4e-106 389.4 297 68.7
BcaNung01628 Brassica carinata HOM05D006582 ORTHO05D008313 6.9e-101 371.3 306 65.4
MBI04_g35986_MAGBIO Magnolia biondii HOM05D006582 ORTHO05D008313 1.6e-97 360.1 298 65.8
BcaNung01632 Brassica carinata HOM05D006582 ORTHO05D008313 2.5e-95 352.8 320 61.6
ATR0933G001 Amborella trichopoda HOM05D006582 ORTHO05D008313 6.7e-88 328.2 311 56.3
Os06g0129300 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.5e-87 327.0 272 62.1
Hma1.2p1_0415F.1_g148020 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 1.3e-86 323.9 222 74.8
Zm00001eb378450 Zea mays HOM05D006582 ORTHO05D008313 3.4e-84 315.8 272 59.9
Eucgr.K00407 Eucalyptus grandis HOM05D006582 ORTHO05D008313 1.6e-81 307.0 233 69.5
Gohir.A08G102500 Gossypium hirsutum HOM05D006582 ORTHO05D008313 3.5e-81 305.8 237 67.5
MD01G1064500 Malus domestica HOM05D006582 ORTHO05D008313 3.9e-80 302.4 202 78.2
HPP92_007389 Vanilla planifolia HOM05D006582 ORTHO05D008313 3.9e-80 302.4 274 58.8
CDE04G1908 Ceratophyllum demersum HOM05D006582 ORTHO05D008313 2.3e-72 276.6 298 51.3
MD01G1063600 Malus domestica HOM05D006582 ORTHO05D008313 1.5e-71 273.9 257 60.3
Potri.015G029300 Populus trichocarpa HOM05D006582 ORTHO05D008313 3.2e-66 256.1 208 65.4
PGSC0003DMG401018519 Solanum tuberosum HOM05D006582 ORTHO05D008313 1.8e-64 250.4 156 88.5
Os10g0520900 Oryza sativa ssp. japonica HOM05D006582 ORTHO05D008313 1.4e-58 230.7 263 46.0
Zm00001eb021230 Zea mays HOM05D006582 ORTHO05D008313 5.7e-55 218.8 284 42.6
Cpa.g.sc3.116 Carica papaya HOM05D006582 ORTHO05D008313 2.6e-52 209.9 192 62.5
Mapoly0081s0017 Marchantia polymorpha HOM05D006582 ORTHO05D008313 8.8e-48 194.9 316 37.3
SMO356G0114 Selaginella moellendorffii HOM05D001613 ORTHO05D001556 1.4e-45 187.6 273 37.4
AagrBONN_evm.TU.Sc2ySwM_228.4673 Anthoceros agrestis HOM05D006582 ORTHO05D008313 2.6e-39 166.8 239 40.2
Pp3c14_24810 Physcomitrium patens HOM05D006582 ORTHO05D008313 2.4e-37 160.2 212 41.5
Hma1.2p1_0512F.1_g169380 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 3.5e-36 156.4 290 40.7
CiPaw.05G199600 Carya illinoinensis HOM05D006582 ORTHO05D008313 2.7e-33 146.7 116 61.2
Hma1.2p1_0415F.1_g148000 Hydrangea macrophylla HOM05D006582 ORTHO05D008313 2.7e-28 130.2 88 77.3
CBR_g57838 Chara braunii HOM05D006582 ORTHO05D008313 3.5e-28 129.8 237 36.3
SHI19113 Sapria himalayana HOM05D006582 ORTHO05D008313 2.4e-21 107.1 74 70.3
SHI19111 Sapria himalayana HOM05D006582 ORTHO05D008313 1.0e-16 91.7 93 52.7
SEGI_26283 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 7.5e-15 85.5 78 53.8
Rhsim03G0115100 Rhododendron simsii HOM05D006582 ORTHO05D023108 1.3e-14 84.7 135 42.2
MD07G1135700 Malus domestica HOM05D006582 ORTHO05D008313 6.2e-09 65.9 79 55.7
SEGI_35321 Sequoiadendron giganteum HOM05D006582 ORTHO05D008313 3.4e-07 60.1 57 49.1


User provided reference genes

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