Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G480.16 Capsicum annuum HOM05D007770 ORTHO05D009827 1.6e-56 222.6 119 100.0
Solyc08g069230.3 Solanum lycopersicum HOM05D007770 ORTHO05D009827 2.1e-48 195.7 119 87.4
PGSC0003DMG400029583 Solanum tuberosum HOM05D007770 ORTHO05D009827 1.0e-47 193.4 119 87.4
Sopen08g022850 Solanum pennellii HOM05D007770 ORTHO05D009827 3.0e-47 191.8 119 85.7
Nitab4.5_0001942g0170 Nicotiana tabacum HOM05D007770 ORTHO05D009827 8.4e-42 173.7 119 81.5
Nitab4.5_0000970g0130 Nicotiana tabacum HOM05D007770 ORTHO05D009827 2.7e-32 142.1 95 71.6
MSTRG.13938 Avicennia marina HOM05D007770 ORTHO05D009827 1.8e-28 129.4 119 51.3
GSVIVG01035563001 Vitis vinifera HOM05D007770 ORTHO05D009827 9.0e-28 127.1 89 76.4
Dinv13246 Davidia involucrata HOM05D007770 ORTHO05D009827 5.8e-27 124.4 123 56.1
FAN20G1378 Fragaria x ananassa HOM05D007770 ORTHO05D009827 8.4e-26 120.6 90 73.3
FvH4_2g36440 Fragaria vesca HOM05D007770 ORTHO05D009827 1.9e-25 119.4 90 60.0
FAN27G1234 Fragaria x ananassa HOM05D007770 ORTHO05D009827 1.9e-25 119.4 90 60.0
Lsat_1_v5_gn_3_26540 Lactuca sativa HOM05D007770 ORTHO05D009827 4.2e-25 118.2 104 57.7
QL12p025908 Quercus lobata HOM05D007770 ORTHO05D009827 4.2e-25 118.2 99 55.6
Thecc.09G003100 Theobroma cacao HOM05D007770 ORTHO05D009827 4.2e-25 118.2 91 72.5
TWI34G0832 Tripterygium wilfordii HOM05D007770 ORTHO05D009827 9.3e-25 117.1 84 65.5
Gohir.D06G109700 Gossypium hirsutum HOM05D007770 ORTHO05D009827 2.1e-24 115.9 119 62.2
BcaC02g08464 Brassica carinata HOM05D007770 ORTHO05D009827 2.7e-24 115.5 95 72.6
CARHR117660 Cardamine hirsuta HOM05D007770 ORTHO05D009827 2.7e-24 115.5 97 57.7
AT2G24395 Arabidopsis thaliana HOM05D007770 ORTHO05D009827 4.6e-24 114.8 99 56.6
Ciclev10010266m.g Citrus clementina HOM05D007770 ORTHO05D009827 4.6e-24 114.8 79 60.8
Carub.0004s0375 Capsella rubella HOM05D007770 ORTHO05D009827 6.1e-24 114.4 96 58.3
BolC4t26952H Brassica oleracea HOM05D007770 ORTHO05D009827 7.9e-24 114.0 123 60.2
Nn8g41062 Nelumbo nucifera HOM05D007770 ORTHO05D009827 7.9e-24 114.0 83 60.2
Duzib150G1352 Durio zibethinus HOM05D007770 ORTHO05D009827 1.0e-23 113.6 90 55.6
Gorai.010G124500 Gossypium raimondii HOM05D007770 ORTHO05D009827 1.0e-23 113.6 119 61.3
AL4G14830 Arabidopsis lyrata HOM05D007770 ORTHO05D009827 1.3e-23 113.2 101 55.4
Prupe.1G455800 Prunus persica HOM05D007770 ORTHO05D009827 1.8e-23 112.8 93 69.9
MD08G1124100 Malus domestica HOM05D007770 ORTHO05D009827 2.3e-23 112.5 92 56.5
Atru.chr7.2683 Acer truncatum HOM05D007770 ORTHO05D009827 3.0e-23 112.1 84 58.3
Eucgr.C04242 Eucalyptus grandis HOM05D007770 ORTHO05D009827 3.0e-23 112.1 82 58.5
Thhalv10000372m.g Eutrema salsugineum HOM05D007770 ORTHO05D009827 3.0e-23 112.1 91 60.4
HanXRQChr17g0539271 Helianthus annuus HOM05D007770 ORTHO05D009827 3.0e-23 112.1 98 61.2
TAR625G0611 Trochodendron aralioides HOM05D007770 ORTHO05D009827 3.0e-23 112.1 118 50.8
Sp4g03420 Schrenkiella parvula HOM05D007770 ORTHO05D009827 3.9e-23 111.7 98 56.1
A04p18710 Brassica napus HOM05D007770 ORTHO05D009827 5.1e-23 111.3 97 67.0
BraA04t17481Z Brassica rapa HOM05D007770 ORTHO05D009827 5.1e-23 111.3 97 67.0
DCAR_000666 Daucus carota HOM05D007770 ORTHO05D009827 5.1e-23 111.3 113 61.1
arahy.Tifrunner.gnm1.ann1.DWH8JW Arachis hypogaea HOM05D007770 ORTHO05D009827 6.7e-23 110.9 81 72.8
arahy.Tifrunner.gnm1.ann1.SE3NL1 Arachis hypogaea HOM05D007770 ORTHO05D009827 6.7e-23 110.9 81 72.8
Migut.E01418 Erythranthe guttata HOM05D007770 ORTHO05D009827 6.7e-23 110.9 93 51.6
Manes.16G137500 Manihot esculenta HOM05D007770 ORTHO05D009827 6.7e-23 110.9 89 61.8
ECA246G2424 Erigeron canadensis HOM05D007770 ORTHO05D009827 1.5e-22 109.8 92 55.4
EL10Ac2g03698 Beta vulgaris HOM05D007770 ORTHO05D009827 1.9e-22 109.4 72 77.8
CiPaw.08G021600 Carya illinoinensis HOM05D007770 ORTHO05D009827 1.9e-22 109.4 111 51.4
CSS0027547 Camellia sinensis var. sinensis HOM05D007770 ORTHO05D009827 2.5e-22 109.0 73 71.2
CSS0009557 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D009827 3.3e-22 108.6 73 64.4
Phvul.009G103700 Phaseolus vulgaris HOM05D007770 ORTHO05D009827 3.3e-22 108.6 81 56.8
Aa31sc132G30 Aethionema arabicum HOM05D007770 ORTHO05D009827 4.3e-22 108.2 107 49.5
CANSAT56G0680 Cannabis sativa HOM05D007770 ORTHO05D009827 5.7e-22 107.8 74 62.2
Lj1g0002810 Lotus japonicus HOM05D007770 ORTHO05D009827 5.7e-22 107.8 87 58.6
C04p54000 Brassica napus HOM05D007770 ORTHO05D009827 1.3e-21 106.7 123 58.5
CDE02G4318 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.3e-21 106.7 78 75.6
Potri.006G278250 Populus trichocarpa HOM05D007770 ORTHO05D009827 1.6e-21 106.3 89 67.4
Aqoxy7G02675 Aquilegia oxysepala HOM05D007770 ORTHO05D009827 4.8e-21 104.8 109 46.8
Cc08_g05750 Coffea canephora HOM05D007770 ORTHO05D009827 8.2e-21 104.0 72 61.1
CDE06G0935 Ceratophyllum demersum HOM05D007770 ORTHO05D009827 1.4e-20 103.2 104 61.5
RcHm_v2.0_Chr6g0305461 Rosa chinensis HOM05D007770 ORTHO05D009827 1.4e-20 103.2 91 68.1
PSO063G4434 Papaver somniferum HOM05D007770 ORTHO05D009827 1.8e-20 102.8 79 55.7
VMungo1309G0540 Vigna mungo HOM05D007770 ORTHO05D009827 3.1e-20 102.1 74 55.4
SalBow8G5425 Salvia bowleyana HOM05D007770 ORTHO05D009827 6.9e-20 100.9 91 64.8
Glyma.04G077900 Glycine max HOM05D007770 ORTHO05D009827 1.5e-19 99.8 68 64.7
Sabra06G0215900 Salix brachista HOM05D007770 ORTHO05D009827 2.6e-19 99.0 93 64.5
CANSAT56G1809 Cannabis sativa HOM05D007770 ORTHO05D009827 2.9e-18 95.5 54 75.9
TPR.G12312 Trifolium pratense HOM05D007770 ORTHO05D009827 2.9e-18 95.5 77 49.4
Medtr3g109170 Medicago truncatula HOM05D007770 ORTHO05D009827 6.5e-18 94.4 77 50.6
FAN15G1940 Fragaria x ananassa HOM05D007770 ORTHO05D009827 3.2e-17 92.0 57 66.7
Psat5g024680 Pisum sativum HOM05D007770 ORTHO05D009827 4.2e-17 91.7 68 54.4
arahy.Tifrunner.gnm1.ann1.T2QDAL Arachis hypogaea HOM05D007770 ORTHO05D009827 3.6e-16 88.6 53 66.0
MELO3C011169.2 Cucumis melo HOM05D007770 ORTHO05D009827 4.6e-16 88.2 75 53.3
Sed0000657 Sechium edule HOM05D007770 ORTHO05D009827 1.0e-15 87.0 56 64.3
Gohir.A06G107400 Gossypium hirsutum HOM05D007770 ORTHO05D009827 1.4e-15 86.7 86 53.5
Pp3c27_7640 Physcomitrium patens HOM05D007770 ORTHO05D009827 3.0e-15 85.5 72 48.6
ClCG08G012500 Citrullus lanatus HOM05D007770 ORTHO05D009827 3.9e-15 85.1 75 52.0
Lalb_Chr23g0269281 Lupinus albus HOM05D007770 ORTHO05D009827 6.7e-15 84.3 80 65.0
CsaV3_2G031200 Cucumis sativus L. HOM05D007770 ORTHO05D009827 8.8e-15 84.0 75 52.0
HPP92_017098 Vanilla planifolia HOM05D007770 ORTHO05D009827 8.8e-15 84.0 63 54.0
MD15G1102800 Malus domestica HOM05D007770 ORTHO05D009827 1.8e-12 76.3 88 44.3
Peaxi162Scf00213g00947 Petunia axillaris HOM05D007770 ORTHO05D009827 2.4e-12 75.9 123 40.7
unitig_747.g21378 Utricularia gibba HOM05D007770 ORTHO05D009827 1.2e-11 73.6 85 40.0
Os08g0520850 Oryza sativa ssp. japonica HOM05D007770 ORTHO05D009827 1.5e-11 73.2 39 71.8
CBR_g3948 Chara braunii HOM05D007770 ORTHO05D009827 7.7e-11 70.9 63 47.6
Mapoly0035s0047 Marchantia polymorpha HOM05D007770 ORTHO05D009827 1.0e-10 70.5 67 41.8
HPP92_017108 Vanilla planifolia HOM05D007770 ORTHO05D009827 2.5e-09 65.9 36 66.7
Glyma.06G079000 Glycine max HOM05D007770 ORTHO05D009827 1.2e-08 63.5 30 76.7
MD08G1226400 Malus domestica HOM05D007770 ORTHO05D009827 1.2e-08 63.5 33 81.8
AagrBONN_evm.TU.Sc2ySwM_228.4990 Anthoceros agrestis HOM05D007770 ORTHO05D009827 2.1e-08 62.8 63 42.9
Zm00001eb035580 Zea mays HOM05D007770 ORTHO05D009827 2.7e-08 62.4 35 68.6
Actinidia25745 Actinidia chinensis HOM05D007770 ORTHO05D009827 6.1e-08 61.2 52 53.8


User provided reference genes

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