Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G48.33 Capsicum annuum HOM05D005822 ORTHO05D007267 1.9e-77 292.4 140 100.0
PGSC0003DMG400014819 Solanum tuberosum HOM05D005822 ORTHO05D007267 8.6e-62 240.4 121 92.6
Solyc03g093240.4 Solanum lycopersicum HOM05D005822 ORTHO05D007267 9.5e-61 236.9 121 91.7
Sopen03g024040 Solanum pennellii HOM05D005822 ORTHO05D007267 1.6e-60 236.1 121 92.6
Peaxi162Scf00241g00035 Petunia axillaris HOM05D005822 ORTHO05D007267 1.2e-58 229.9 121 86.8
Nitab4.5_0003490g0080 Nicotiana tabacum HOM05D005822 ORTHO05D007267 1.9e-45 186.0 100 85.0
Actinidia13579 Actinidia chinensis HOM05D005822 ORTHO05D007267 3.3e-45 185.3 121 66.9
CiPaw.04G059500 Carya illinoinensis HOM05D005822 ORTHO05D007267 4.3e-45 184.9 121 68.6
Prupe.2G276500 Prunus persica HOM05D005822 ORTHO05D007267 5.6e-45 184.5 121 68.6
MSTRG.8827 Avicennia marina HOM05D005822 ORTHO05D007267 3.6e-44 181.8 121 65.3
Ca_28037_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 3.6e-44 181.8 121 66.1
Ca_30671_v3 Cicer arietinum L. HOM05D005822 ORTHO05D007267 3.6e-44 181.8 121 66.1
GSVIVG01018681001 Vitis vinifera HOM05D005822 ORTHO05D007267 1.1e-43 180.3 121 65.3
QL09p005687 Quercus lobata HOM05D005822 ORTHO05D007267 6.9e-43 177.6 124 63.7
SGA_v2.0_scaffold44G16550 Striga asiatica HOM05D005822 ORTHO05D007267 6.9e-43 177.6 118 67.8
Lj3g0012047 Lotus japonicus HOM05D005822 ORTHO05D007267 1.2e-42 176.8 121 62.8
Medtr2g060420 Medicago truncatula HOM05D005822 ORTHO05D007267 1.5e-42 176.4 121 63.6
SalBow8G0561 Salvia bowleyana HOM05D005822 ORTHO05D007267 1.5e-42 176.4 121 66.1
Ciclev10004670m.g Citrus clementina HOM05D005822 ORTHO05D007267 2.0e-42 176.0 121 67.8
Oeu022478.1 Olea europaea HOM05D005822 ORTHO05D007267 2.0e-42 176.0 117 67.5
CSS0032435 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 2.6e-42 175.6 121 65.3
CSS0049205 Camellia sinensis var. sinensis HOM05D005822 ORTHO05D007267 3.4e-42 175.3 121 65.3
RcHm_v2.0_Chr1g0374211 Rosa chinensis HOM05D005822 ORTHO05D007267 3.4e-42 175.3 121 63.6
Dinv28582 Davidia involucrata HOM05D005822 ORTHO05D007267 5.8e-42 174.5 121 66.9
TAR629G1836 Trochodendron aralioides HOM05D005822 ORTHO05D007267 5.8e-42 174.5 122 63.9
Migut.F00481 Erythranthe guttata HOM05D005822 ORTHO05D007267 7.6e-42 174.1 121 62.8
Psat7g157640 Pisum sativum HOM05D005822 ORTHO05D007267 9.9e-42 173.7 121 61.2
Potri.001G124900 Populus trichocarpa HOM05D005822 ORTHO05D007267 9.9e-42 173.7 121 64.5
VMungo1127G1343 Vigna mungo HOM05D005822 ORTHO05D007267 1.7e-41 172.9 127 62.2
Lalb_Chr06g0161881 Lupinus albus HOM05D005822 ORTHO05D007267 2.9e-41 172.2 121 62.8
Cfa008156 Carpinus fangiana HOM05D005822 ORTHO05D007267 3.8e-41 171.8 121 65.3
FAN06G4841 Fragaria x ananassa HOM05D005822 ORTHO05D007267 4.9e-41 171.4 121 63.6
Hund04595 Selenicereus undatus HOM05D005822 ORTHO05D007267 6.4e-41 171.0 121 62.0
FAN06G5026 Fragaria x ananassa HOM05D005822 ORTHO05D007267 8.4e-41 170.6 121 63.6
FvH4_7g27380 Fragaria vesca HOM05D005822 ORTHO05D007267 1.1e-40 170.2 121 62.0
Gohir.A12G198100 Gossypium hirsutum HOM05D005822 ORTHO05D007267 1.1e-40 170.2 121 64.5
Lj1A979T81 Lonicera japonica HOM05D005822 ORTHO05D007267 1.1e-40 170.2 123 65.0
Rhsim03G0166500 Rhododendron simsii HOM05D005822 ORTHO05D007267 1.1e-40 170.2 121 62.8
Aqoxy5G03861 Aquilegia oxysepala HOM05D005822 ORTHO05D007267 1.4e-40 169.9 122 64.8
Eucgr.A02894 Eucalyptus grandis HOM05D005822 ORTHO05D007267 1.4e-40 169.9 124 64.5
Cfa008175 Carpinus fangiana HOM05D005822 ORTHO05D007267 2.4e-40 169.1 121 63.6
FAN03G1300 Fragaria x ananassa HOM05D005822 ORTHO05D007267 2.4e-40 169.1 121 62.8
Glyma.12G012400 Glycine max HOM05D005822 ORTHO05D007267 3.2e-40 168.7 125 62.4
Glyma.09G224600 Glycine max HOM05D005822 ORTHO05D007267 4.2e-40 168.3 121 62.0
Manes.02G134200 Manihot esculenta HOM05D005822 ORTHO05D007267 4.2e-40 168.3 121 63.6
Haze_13887 Corylus avellana HOM05D005822 ORTHO05D007267 5.4e-40 167.9 121 64.5
Cc02_g04350 Coffea canephora HOM05D005822 ORTHO05D007267 1.2e-39 166.8 121 62.8
Sabra03G0075200 Salix brachista HOM05D005822 ORTHO05D007267 1.6e-39 166.4 121 62.0
FvH4_7g28391 Fragaria vesca HOM05D005822 ORTHO05D007267 2.1e-39 166.0 121 60.3
Gorai.008G215800 Gossypium raimondii HOM05D005822 ORTHO05D007267 2.1e-39 166.0 121 62.8
CANSAT56G1500 Cannabis sativa HOM05D005822 ORTHO05D007267 6.0e-39 164.5 121 62.8
Nn1g00973 Nelumbo nucifera HOM05D005822 ORTHO05D007267 6.0e-39 164.5 121 62.8
PGR042G1636 Punica granatum HOM05D005822 ORTHO05D007267 6.0e-39 164.5 121 62.0
TWI14G0278 Tripterygium wilfordii HOM05D005822 ORTHO05D007267 6.0e-39 164.5 119 65.5
MBI12_g29751_MAGBIO Magnolia biondii HOM05D005822 ORTHO05D007267 7.8e-39 164.1 121 62.8
MD07G1252900 Malus domestica HOM05D005822 ORTHO05D007267 7.8e-39 164.1 121 63.6
Duzib205G0525 Durio zibethinus HOM05D005822 ORTHO05D007267 1.0e-38 163.7 121 62.8
AUR62002209 Chenopodium quinoa HOM05D005822 ORTHO05D007267 1.7e-38 162.9 121 57.0
Atru.chr8.1041 Acer truncatum HOM05D005822 ORTHO05D007267 3.0e-38 162.2 119 63.0
Os02g0104700 Oryza sativa ssp. japonica HOM05D005822 ORTHO05D007267 3.0e-38 162.2 126 61.1
Ah.03g147280 Amaranthus hybridus HOM05D005822 ORTHO05D007267 6.6e-38 161.0 135 54.1
CsaV3_5G005200 Cucumis sativus L. HOM05D005822 ORTHO05D007267 8.7e-38 160.6 121 61.2
unitig_52.g17763 Utricularia gibba HOM05D005822 ORTHO05D007267 3.3e-37 158.7 121 60.3
AUR62015490 Chenopodium quinoa HOM05D005822 ORTHO05D007267 5.6e-37 157.9 122 55.7
Sed0004127 Sechium edule HOM05D005822 ORTHO05D007267 2.1e-36 156.0 119 60.5
THA.LOC104819450 Tarenaya hassleriana HOM05D005822 ORTHO05D007267 2.4e-35 152.5 120 55.8
ECA232G0361 Erigeron canadensis HOM05D005822 ORTHO05D007267 4.0e-35 151.8 119 62.2
Lsat_1_v5_gn_9_52001 Lactuca sativa HOM05D005822 ORTHO05D007267 4.0e-35 151.8 124 58.1
COL.COLO4_14108 Corchorus olitorius HOM05D002696 ORTHO05D003940 5.3e-35 151.4 112 60.7
vmacro06808 Vaccinium macrocarpon HOM05D005822 ORTHO05D007267 6.9e-35 151.0 115 60.9
BcaB01g00923 Brassica carinata HOM05D005822 ORTHO05D007267 7.6e-34 147.5 121 52.1
HanXRQChr16g0512801 Helianthus annuus HOM05D005822 ORTHO05D007267 7.6e-34 147.5 123 56.9
PSO782G2939 Papaver somniferum HOM05D005822 ORTHO05D007267 7.6e-34 147.5 120 58.3
AL5G26670 Arabidopsis lyrata HOM05D005822 ORTHO05D007267 1.7e-33 146.4 121 51.2
PSO063G1588 Papaver somniferum HOM05D005822 ORTHO05D007267 1.7e-33 146.4 120 57.5
CARHR156090 Cardamine hirsuta HOM05D005822 ORTHO05D007267 2.9e-33 145.6 121 51.2
BcaC01g01823 Brassica carinata HOM05D005822 ORTHO05D007267 4.9e-33 144.8 121 51.2
EL10Ac3g05850 Beta vulgaris HOM05D005822 ORTHO05D007267 1.1e-32 143.7 108 56.5
Thhalv10010252m.g Eutrema salsugineum HOM05D005822 ORTHO05D007267 1.1e-32 143.7 121 49.6
ATR0317G089 Amborella trichopoda HOM05D005822 ORTHO05D007267 3.2e-32 142.1 122 54.1
DCAR_014621 Daucus carota HOM05D005822 ORTHO05D007267 3.2e-32 142.1 192 40.6
A06p20210 Brassica napus HOM05D005822 ORTHO05D007267 7.1e-32 141.0 122 50.8
BraA06t25104Z Brassica rapa HOM05D005822 ORTHO05D007267 7.1e-32 141.0 122 50.8
Sp5g14430 Schrenkiella parvula HOM05D005822 ORTHO05D007267 7.1e-32 141.0 121 49.6
AT3G47450 Arabidopsis thaliana HOM05D005822 ORTHO05D007267 9.3e-32 140.6 121 49.6
Carub.0005s1354 Capsella rubella HOM05D005822 ORTHO05D007267 1.2e-31 140.2 121 51.2
HPP92_012738 Vanilla planifolia HOM05D005822 ORTHO05D007267 1.2e-31 140.2 122 53.3
BolC3t19450H Brassica oleracea HOM05D005822 ORTHO05D007267 1.3e-30 136.7 122 50.0
Aa31LG4G16250 Aethionema arabicum HOM05D005822 ORTHO05D007267 1.8e-30 136.3 123 46.3
C03p71590 Brassica napus HOM05D005822 ORTHO05D007267 1.8e-30 136.3 122 50.0
SEGI_33871 Sequoiadendron giganteum HOM05D005822 ORTHO05D007267 2.4e-27 125.9 119 47.9
FAN06G3713 Fragaria x ananassa HOM05D005822 ORTHO05D007267 2.1e-23 112.8 94 55.3
FAN10G3692 Fragaria x ananassa HOM05D005822 ORTHO05D025397 5.1e-22 108.2 113 49.6
AagrBONN_evm.TU.Sc2ySwM_344.3689 Anthoceros agrestis HOM05D005822 ORTHO05D007267 3.3e-21 105.5 122 42.6
FvH4_7g27354 Fragaria vesca HOM05D005822 ORTHO05D007267 2.6e-18 95.9 72 56.9
ClCG01G004960 Citrullus lanatus HOM05D005822 ORTHO05D007267 3.4e-18 95.5 113 43.4
FvH4_7g27641 Fragaria vesca HOM05D005822 ORTHO05D007267 3.8e-17 92.0 72 56.9
FvH4_7g25681 Fragaria vesca HOM05D005822 ORTHO05D007267 5.5e-16 88.2 59 67.8
Pp3c7_23510 Physcomitrium patens HOM05D005822 ORTHO05D007267 4.6e-15 85.1 117 39.3
Mapoly0014s0202 Marchantia polymorpha HOM05D005822 ORTHO05D007267 1.0e-14 84.0 142 33.8
SMO367G0603 Selaginella moellendorffii HOM05D005822 ORTHO05D007267 1.0e-14 84.0 120 33.3
Haze_13854 Corylus avellana HOM05D005822 ORTHO05D007267 8.7e-14 80.9 58 63.8
CBR_g34812 Chara braunii HOM05D005822 ORTHO05D007267 2.1e-12 76.3 162 29.0
Cpa.g.sc3.330 Carica papaya HOM05D005822 ORTHO05D007267 1.2e-07 60.5 34 76.5
Gohir.D12G200700 Gossypium hirsutum HOM05D005822 ORTHO05D007267 1.2e-07 60.5 42 61.9
GSVIVG01018708001 Vitis vinifera HOM05D005822 ORTHO05D007267 2.7e-07 59.3 42 54.8
arahy.Tifrunner.gnm1.ann1.47454T Arachis hypogaea HOM05D005822 ORTHO05D007267 3.6e-07 58.9 36 63.9
Sc19g0002050 Simmondsia chinensis HOM05D005822 ORTHO05D007267 6.1e-07 58.2 61 44.3


User provided reference genes

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