Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 6.1e-252 873.6 427 100.0
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.8e-209 731.5 429 84.1
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 3.5e-207 724.9 451 79.8
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 1.3e-196 689.9 431 78.9
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 8.1e-188 660.6 506 67.2
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 1.3e-153 547.0 448 64.5
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 2.8e-140 502.7 329 77.2
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 1.3e-116 424.1 429 51.7
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 3.7e-116 422.5 424 50.9
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 6.4e-116 421.8 458 49.1
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 7.0e-115 418.3 435 51.3
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 9.2e-115 417.9 422 50.7
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.2e-114 417.5 413 53.5
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 6.0e-114 415.2 429 50.1
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 8.0e-111 404.8 426 49.3
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.4e-110 404.1 421 48.7
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 3.1e-110 402.9 430 48.6
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 1.2e-109 401.0 423 49.6
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 2.0e-109 400.2 419 47.7
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 2.6e-109 399.8 424 50.7
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 1.7e-108 397.1 424 49.1
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 6.4e-108 395.2 427 47.8
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 5.4e-107 392.1 434 49.1
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 5.4e-107 392.1 437 49.0
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 7.0e-107 391.7 417 48.2
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 6.6e-105 385.2 426 47.2
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 8.6e-105 384.8 418 50.2
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.1e-104 384.4 426 47.2
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 1.5e-104 384.0 425 46.8
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 1.2e-103 380.9 407 50.1
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 8.1e-103 378.3 429 45.9
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.8e-102 377.1 421 47.0
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 2.3e-102 376.7 440 46.4
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 3.1e-102 376.3 434 46.3
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 4.0e-102 375.9 420 46.4
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 8.9e-102 374.8 420 46.2
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 5.8e-101 372.1 421 46.3
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 1.7e-100 370.5 430 44.9
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 7.1e-99 365.2 429 45.2
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 7.8e-98 361.7 429 45.9
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 2.3e-97 360.1 424 46.2
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 3.9e-97 359.4 429 45.5
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.2e-95 354.4 359 51.3
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 2.1e-95 353.6 422 44.3
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 1.5e-93 347.4 421 44.4
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 2.0e-93 347.1 429 42.9
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 7.6e-93 345.1 424 44.1
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 4.9e-92 342.4 430 43.0
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.4e-91 340.9 390 44.9
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 1.4e-91 340.9 425 42.8
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 4.2e-91 339.3 433 42.3
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 4.6e-90 335.9 434 42.4
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 3.6e-87 326.2 355 47.3
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 8.1e-87 325.1 383 44.6
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 4.9e-84 315.8 309 53.4
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 1.4e-83 314.3 453 43.0
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 3.5e-82 309.7 380 43.9
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 1.1e-80 304.7 377 42.7
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 1.9e-80 303.9 447 42.3
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 5.6e-80 302.4 434 39.9
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 1.3e-79 301.2 390 41.8
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 3.6e-79 299.7 419 42.5
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 1.4e-78 297.7 370 42.4
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.7e-76 290.8 363 43.8
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 1.1e-70 271.6 267 53.6
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 9.3e-67 258.5 426 39.9
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 1.5e-64 251.1 342 40.4
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 5.7e-64 249.2 415 36.9
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 4.3e-56 223.0 253 44.7
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 1.8e-49 201.1 225 49.8
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 7.7e-45 185.7 258 38.0
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 2.9e-44 183.7 158 55.1
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 6.5e-44 182.6 205 47.3
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.9e-43 181.0 207 45.9
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.2e-36 157.5 312 35.9
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 2.2e-36 157.5 84 89.3
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 4.8e-31 139.8 254 33.9
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 1.5e-24 118.2 85 70.6
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.1e-19 102.1 168 39.3
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.7e-18 97.4 133 43.6
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 8.8e-17 92.4 72 58.3
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 2.7e-13 80.9 179 27.9
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 4.7e-10 70.1 217 24.9
Zm00001eb081310 Zea mays HOM05D003443 ORTHO05D009887 2.0e-08 64.7 126 29.4
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 1.4e-06 58.5 39 74.4
Lsat_1_v5_gn_1_21640 Lactuca sativa HOM05D001068 ORTHO05D002190 4.1e-06 57.0 46 52.2


User provided reference genes

Program Settings