Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G474.14 Capsicum annuum HOM05D012638 ORTHO05D002272 2.5e-221 771.9 424 100.0
Nitab4.5_0003441g0060 Nicotiana tabacum HOM05D012638 ORTHO05D002272 1.1e-64 251.5 298 48.7
PGSC0003DMG401012214 Solanum tuberosum HOM05D012638 ORTHO05D002272 4.3e-64 249.6 326 49.1
Nitab4.5_0000580g0290 Nicotiana tabacum HOM05D012638 ORTHO05D002272 1.2e-58 231.5 252 52.0
CAN.G774.15 Capsicum annuum HOM05D012638 ORTHO05D002272 7.6e-37 159.1 170 55.9
CAN.G774.16 Capsicum annuum HOM05D012638 ORTHO05D002272 5.5e-35 152.9 170 59.4
CAN.G774.17 Capsicum annuum HOM05D012638 ORTHO05D002272 4.8e-31 139.8 170 54.1
Sopen08g029290 Solanum pennellii HOM05D012638 ORTHO05D002272 3.8e-28 130.2 328 33.8
Oeu009176.1 Olea europaea HOM05D012638 ORTHO05D002272 1.1e-22 112.1 166 38.6
SalBow1G2737 Salvia bowleyana HOM05D012638 ORTHO05D002272 1.5e-21 108.2 214 32.7
Dinv37647 Davidia involucrata HOM05D002972 ORTHO05D002272 3.9e-17 93.6 317 29.0
Migut.E01098 Erythranthe guttata HOM05D012638 ORTHO05D002272 1.3e-15 88.6 177 45.8
COL.COLO4_17698 Corchorus olitorius HOM05D002972 ORTHO05D002272 7.7e-13 79.3 203 30.5
SGA_v2.0_scaffold144G35949 Striga asiatica HOM05D012638 ORTHO05D002272 1.0e-12 79.0 299 27.4
Peaxi162Scf00119g00710 Petunia axillaris HOM05D009759 ORTHO05D011206 8.0e-10 69.3 139 36.0
Gohir.A12G036900 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.8e-09 68.2 124 33.9
Gohir.D12G035500 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.8e-09 68.2 124 33.9
Gorai.008G036800 Gossypium raimondii HOM05D002972 ORTHO05D002272 1.8e-09 68.2 124 33.9
Duzib052G0730 Durio zibethinus HOM05D002972 ORTHO05D002272 8.8e-09 65.9 100 33.0
COL.COLO4_17354 Corchorus olitorius HOM05D002972 ORTHO05D002272 2.6e-08 64.3 125 32.0
Eucgr.I01431 Eucalyptus grandis HOM05D002972 ORTHO05D002272 3.3e-08 63.9 129 29.5
Manes.04G072100 Manihot esculenta HOM05D002972 ORTHO05D002272 3.3e-08 63.9 87 37.9
Manes.11G096900 Manihot esculenta HOM05D002972 ORTHO05D002272 3.3e-08 63.9 139 31.7
TPR.G6199 Trifolium pratense HOM05D008992 ORTHO05D002272 3.3e-08 63.9 177 25.4
CiPaw.05G083100 Carya illinoinensis HOM05D002972 ORTHO05D002272 7.4e-08 62.8 142 30.3
Peaxi162Scf00015g00238 Petunia axillaris HOM05D002972 ORTHO05D002272 9.7e-08 62.4 148 30.4
CiPaw.06G121300 Carya illinoinensis HOM05D002972 ORTHO05D002272 1.3e-07 62.0 135 30.4
Duzib248G0175 Durio zibethinus HOM05D002972 ORTHO05D002272 1.3e-07 62.0 100 31.0
Ciclev10028228m.g Citrus clementina HOM05D002972 ORTHO05D002272 1.7e-07 61.6 97 34.0
TAR633G1264 Trochodendron aralioides HOM05D002972 ORTHO05D002272 1.7e-07 61.6 101 34.7
HanXRQChr03g0080231 Helianthus annuus HOM05D000555 ORTHO05D000646 2.2e-07 61.2 114 34.2
Ca_03843_v3 Cicer arietinum L. HOM05D008992 ORTHO05D002272 2.8e-07 60.8 173 26.0
ClCG02G004020 Citrullus lanatus HOM05D002972 ORTHO05D002272 2.8e-07 60.8 87 34.5
COL.COLO4_21920 Corchorus olitorius HOM05D000126 ORTHO05D002272 2.8e-07 60.8 164 25.6
PGR142G3650 Punica granatum HOM05D002972 ORTHO05D002272 2.8e-07 60.8 99 29.3
Thecc.02G058300 Theobroma cacao HOM05D002972 ORTHO05D002272 2.8e-07 60.8 119 27.7
TPR.G6214 Trifolium pratense HOM05D008992 ORTHO05D002272 3.7e-07 60.5 172 26.2
TPR.G6244 Trifolium pratense HOM05D008992 ORTHO05D007974 3.7e-07 60.5 77 37.7
PGR142G3299 Punica granatum HOM05D002972 ORTHO05D002272 6.3e-07 59.7 122 27.9
Thecc.01G020000 Theobroma cacao HOM05D000126 ORTHO05D000085 6.3e-07 59.7 269 22.7
MELO3C013346.2 Cucumis melo HOM05D002972 ORTHO05D002272 8.2e-07 59.3 87 33.3
Medtr8g089530 Medicago truncatula HOM05D008992 ORTHO05D002272 8.2e-07 59.3 138 27.5
Peaxi162Scf00015g00226 Petunia axillaris HOM05D002972 ORTHO05D002272 8.2e-07 59.3 149 28.2
Gohir.A03G205300 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.1e-06 58.9 148 24.3
Gorai.005G254500 Gossypium raimondii HOM05D002972 ORTHO05D002272 1.1e-06 58.9 148 24.3
QL07p013083 Quercus lobata HOM05D030119 ORTHO05D002272 1.4e-06 58.5 82 40.2
Sed0027632 Sechium edule HOM05D002972 ORTHO05D002272 1.4e-06 58.5 184 23.4
Gohir.D02G226600 Gossypium hirsutum HOM05D002972 ORTHO05D002272 1.8e-06 58.2 148 24.3
BcaB08g34951 Brassica carinata HOM05D002972 ORTHO05D002272 2.4e-06 57.8 175 24.6
C09p65720 Brassica napus HOM05D000191 ORTHO05D000122 2.4e-06 57.8 100 35.0
BolC9t59395H Brassica oleracea HOM05D000191 ORTHO05D002272 2.4e-06 57.8 100 35.0
Nitab4.5_0000300g0050 Nicotiana tabacum HOM05D009415 ORTHO05D016356 2.4e-06 57.8 62 46.8
QL11p050942 Quercus lobata HOM05D002972 ORTHO05D002272 3.1e-06 57.4 123 28.5
CSS0037442 Camellia sinensis var. sinensis HOM05D002972 ORTHO05D002272 4.1e-06 57.0 140 30.0
Sed0017149 Sechium edule HOM05D002972 ORTHO05D002272 4.1e-06 57.0 210 21.9
Lalb_Chr08g0246731 Lupinus albus HOM05D002972 ORTHO05D002272 5.3e-06 56.6 185 23.8
Rhsim08G0123100 Rhododendron simsii HOM05D002972 ORTHO05D002272 5.3e-06 56.6 188 23.9
TPR.G35385 Trifolium pratense HOM05D008992 ORTHO05D002272 5.3e-06 56.6 120 27.5
CANSAT25G2833 Cannabis sativa HOM05D002972 ORTHO05D002272 7.0e-06 56.2 127 29.1
Migut.L00029 Erythranthe guttata HOM05D002972 ORTHO05D002272 7.0e-06 56.2 130 27.7
TPR.G6204 Trifolium pratense HOM05D008992 ORTHO05D002272 7.0e-06 56.2 122 27.9
CsaV3_7G001090 Cucumis sativus L. HOM05D002972 ORTHO05D002272 9.1e-06 55.8 87 29.9
Eucgr.I01432 Eucalyptus grandis HOM05D002972 ORTHO05D002272 9.1e-06 55.8 83 32.5
Lj1g0000579 Lotus japonicus HOM05D008992 ORTHO05D002272 9.1e-06 55.8 77 35.1
PGSC0003DMG400002637 Solanum tuberosum HOM05D002972 ORTHO05D002272 9.1e-06 55.8 208 22.6


User provided reference genes

Program Settings