Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 2.1e-114 415.6 195 100.0
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 4.1e-86 321.6 199 78.4
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 2.2e-84 315.8 199 77.9
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 2.2e-84 315.8 199 77.4
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.4e-78 295.8 211 72.5
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.1e-75 287.0 213 70.9
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 4.9e-55 218.4 226 54.9
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 3.2e-54 215.7 215 54.4
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 3.2e-54 215.7 215 54.4
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 7.0e-54 214.5 198 55.6
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 6.0e-53 211.5 195 57.4
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 1.1e-51 207.2 220 50.5
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 1.5e-51 206.8 204 54.9
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.5e-51 206.1 216 50.0
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 1.2e-50 203.8 221 49.3
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.2e-50 203.8 200 56.0
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 2.1e-50 203.0 199 52.8
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 2.8e-50 202.6 198 54.5
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 4.7e-50 201.8 209 52.6
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 1.8e-49 199.9 211 52.6
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 3.1e-49 199.1 209 52.2
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 7.5e-48 194.5 209 52.2
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 9.9e-48 194.1 203 55.7
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 2.2e-47 193.0 199 54.3
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 6.4e-47 191.4 206 51.9
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 6.4e-47 191.4 195 55.9
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 8.3e-47 191.0 205 50.2
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 2.4e-46 189.5 207 51.2
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 3.2e-46 189.1 208 50.0
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 3.2e-46 189.1 204 51.0
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 1.2e-45 187.2 195 53.8
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 1.6e-45 186.8 208 50.5
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 4.6e-45 185.3 207 50.2
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.0e-44 184.1 200 49.5
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 1.0e-44 184.1 199 52.3
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 8.6e-44 181.0 129 64.3
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.9e-43 179.9 219 46.1
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 2.5e-43 179.5 194 50.5
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 4.3e-43 178.7 273 40.7
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 5.6e-43 178.3 189 52.4
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 1.2e-42 177.2 195 50.3
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 3.6e-42 175.6 199 47.7
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 1.2e-40 170.6 203 47.3
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 2.6e-40 169.5 202 49.0
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 4.4e-40 168.7 197 48.7
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 4.4e-40 168.7 211 45.5
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 4.4e-40 168.7 201 48.8
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.3e-39 167.2 184 49.5
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 4.9e-39 165.2 213 46.0
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.9e-38 163.3 125 61.6
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 5.4e-38 161.8 210 45.2
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 9.2e-38 161.0 171 51.5
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.6e-37 160.2 208 47.6
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 3.5e-37 159.1 220 43.2
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 1.0e-36 157.5 133 59.4
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 1.7e-36 156.8 126 59.5
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.9e-36 155.6 115 67.0
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 8.6e-36 154.5 221 42.5
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 1.5e-35 153.7 224 40.6
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 1.9e-35 153.3 132 58.3
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.5e-35 152.9 129 57.4
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 4.3e-35 152.1 211 42.7
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 4.3e-35 152.1 198 44.4
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 5.6e-35 151.8 126 60.3
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 7.3e-35 151.4 203 45.8
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 7.3e-35 151.4 129 59.7
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 2.1e-34 149.8 200 46.0
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 2.8e-34 149.4 133 53.4
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.7e-34 148.7 137 56.9
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.2e-34 148.3 137 56.9
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 1.4e-33 147.1 142 52.8
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.8e-33 146.7 247 40.1
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.8e-33 146.7 247 40.1
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 1.8e-33 146.7 193 44.0
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 2.4e-33 146.4 210 41.9
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.4e-33 146.4 124 60.5
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.4e-33 146.4 133 55.6
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 3.1e-33 146.0 210 41.0
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 5.2e-33 145.2 195 43.1
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 5.2e-33 145.2 183 46.4
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 6.9e-33 144.8 201 42.3
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 6.9e-33 144.8 133 54.9
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 6.9e-33 144.8 198 46.0
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 9.0e-33 144.4 140 55.0
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.0e-32 143.3 137 55.5
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 3.4e-32 142.5 133 55.6
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 4.4e-32 142.1 126 55.6
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 4.4e-32 142.1 195 46.7
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 5.8e-32 141.7 192 46.4
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 7.6e-32 141.4 132 53.0
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.3e-31 140.6 196 42.3
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.3e-31 140.6 125 59.2
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.2e-31 139.8 133 54.1
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 2.9e-31 139.4 145 51.0
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 6.4e-31 138.3 196 42.9
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 8.4e-31 137.9 201 42.8
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 1.1e-30 137.5 86 67.4
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 1.4e-30 137.1 196 41.8
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.4e-30 137.1 105 60.0
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 3.2e-30 136.0 147 50.3
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 5.4e-30 135.2 197 43.1
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 7.1e-30 134.8 211 39.8
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 9.3e-30 134.4 194 42.8
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 9.3e-30 134.4 206 41.3
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 9.3e-30 134.4 143 53.1
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 4.6e-29 132.1 192 41.1
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 1.3e-28 130.6 85 64.7
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 1.9e-27 126.7 200 41.5
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.9e-27 126.7 192 39.6
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.5e-27 126.3 214 36.0
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 4.3e-27 125.6 136 46.3
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 5.6e-27 125.2 123 53.7
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 7.3e-27 124.8 238 35.7
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.1e-26 123.2 129 47.3
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-25 120.9 150 45.3
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.1e-25 120.9 131 50.4
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 1.8e-25 120.2 123 52.0
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.4e-25 119.8 215 36.3
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 4.5e-24 115.5 214 36.0
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 7.6e-24 114.8 136 47.1
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 9.9e-24 114.4 127 51.2
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 8.4e-23 111.3 131 42.7
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.4e-22 110.5 84 59.5
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.4e-22 110.5 84 59.5
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.4e-22 110.5 84 59.5
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 5.4e-22 108.6 205 37.6
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.2e-21 107.5 142 43.7
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 2.1e-21 106.7 140 44.3
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 2.1e-21 106.7 146 44.5
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 2.7e-21 106.3 138 45.7
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 2.7e-21 106.3 138 45.7
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 3.5e-21 105.9 140 44.3
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 3.5e-21 105.9 136 45.6
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 3.5e-21 105.9 136 45.6
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 6.0e-21 105.1 84 56.0
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 6.0e-21 105.1 84 56.0
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 1.0e-20 104.4 120 45.8
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 1.8e-20 103.6 135 43.0
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 1.8e-20 103.6 135 43.0
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 8.7e-20 101.3 132 46.2
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 1.5e-19 100.5 132 44.7
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 1.5e-19 100.5 134 44.8
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 1.9e-19 100.1 132 45.5
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 2.5e-19 99.8 148 40.5
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 2.5e-19 99.8 148 40.5
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 3.3e-19 99.4 135 42.2
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 3.3e-19 99.4 135 42.2
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 8.1e-18 94.7 132 43.9
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 1.1e-17 94.4 133 41.4
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 3.1e-17 92.8 74 59.5
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 2.0e-16 90.1 199 37.2
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 4.9e-15 85.5 143 38.5
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 1.4e-14 84.0 50 72.0
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.9e-14 83.6 100 45.0
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 5.5e-14 82.0 115 43.5
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 5.5e-14 82.0 125 40.8
Sp2g16550 Schrenkiella parvula HOM05D013829 ORTHO05D015952 2.7e-13 79.7 196 35.2
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 6.0e-13 78.6 198 34.8
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.3e-12 76.6 129 40.3
Carub.0005s0566 Capsella rubella HOM05D013829 ORTHO05D015952 1.3e-10 70.9 200 32.5
Nitab4.5_0000040g0600 Nicotiana tabacum HOM05D004407 ORTHO05D005074 2.1e-10 70.1 120 39.2
CANSAT64G1789 Cannabis sativa HOM05D004407 ORTHO05D005074 3.7e-10 69.3 143 37.1
Nitab4.5_0005414g0060 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.8e-10 68.9 134 35.8
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 1.1e-09 67.8 129 38.0
BcaC06g33826 Brassica carinata HOM05D013829 ORTHO05D015952 1.1e-09 67.8 197 32.0
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.8e-09 67.0 86 41.9
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 2.4e-09 66.6 48 66.7
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 3.1e-09 66.2 221 29.4
AL5G16690 Arabidopsis lyrata HOM05D013829 ORTHO05D015952 6.9e-09 65.1 198 31.8
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 6.9e-09 65.1 204 30.4
CARHR148680 Cardamine hirsuta HOM05D013829 ORTHO05D015952 5.8e-08 62.0 143 36.4
C07p36420 Brassica napus HOM05D013829 ORTHO05D015952 7.6e-08 61.6 198 29.3
Peaxi162Scf00080g00175 Petunia axillaris HOM05D004407 ORTHO05D005074 1.0e-07 61.2 78 50.0
AT3G27355 Arabidopsis thaliana HOM05D013829 ORTHO05D015952 3.8e-07 59.3 178 30.3
A06p41240 Brassica napus HOM05D013829 ORTHO05D015952 4.9e-07 58.9 198 29.3
BraA06t27048Z Brassica rapa HOM05D013829 ORTHO05D015952 4.9e-07 58.9 198 29.3
Carub.0006s3296 Capsella rubella HOM05D004407 ORTHO05D005074 4.9e-07 58.9 134 33.6
BcaNung05649 Brassica carinata HOM05D013829 ORTHO05D015952 8.4e-07 58.2 49 57.1
Carub.0004s2401 Capsella rubella HOM05D004407 ORTHO05D005074 9.3e-06 54.7 119 38.7


User provided reference genes

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