Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G473.5 Capsicum annuum HOM05D004010 ORTHO05D004995 7.7e-86 320.5 165 100.0
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 2.8e-59 232.3 135 88.1
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 4.7e-59 231.5 130 90.0
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 8.0e-59 230.7 135 88.9
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 8.0e-59 230.7 135 88.9
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 8.9e-50 200.7 130 75.4
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla HOM05D004010 ORTHO05D004995 7.5e-49 197.6 132 75.0
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 7.1e-47 191.0 132 72.7
CSS0021155 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 2.1e-46 189.5 132 73.5
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 3.5e-46 188.7 137 70.1
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 4.6e-46 188.3 132 71.2
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 4.6e-46 188.3 147 70.1
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 6.0e-46 188.0 132 72.0
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 6.0e-46 188.0 132 72.0
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 7.8e-46 187.6 160 61.9
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 1.3e-45 186.8 132 72.7
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 1.7e-45 186.4 132 72.7
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 3.9e-45 185.3 132 69.7
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 5.1e-45 184.9 132 69.7
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 5.1e-45 184.9 137 69.3
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 2.5e-44 182.6 133 69.2
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 4.3e-44 181.8 132 70.5
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 9.5e-44 180.6 133 68.4
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.2e-43 180.3 132 70.5
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 1.6e-43 179.9 134 70.9
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 1.6e-43 179.9 132 69.7
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 2.1e-43 179.5 132 68.9
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 2.8e-43 179.1 132 68.2
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 3.6e-43 178.7 134 69.4
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 4.7e-43 178.3 134 70.1
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 8.1e-43 177.6 150 62.0
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 8.1e-43 177.6 134 70.1
Ciclev10017517m.g Citrus clementina HOM05D004010 ORTHO05D004995 1.1e-42 177.2 142 64.8
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.3e-42 176.0 134 69.4
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 2.3e-42 176.0 134 69.4
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 4.0e-42 175.3 129 71.3
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 6.8e-42 174.5 132 67.4
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 1.2e-41 173.7 132 65.9
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 2.0e-41 172.9 131 67.9
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 2.6e-41 172.6 137 65.0
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 3.4e-41 172.2 132 67.4
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 4.4e-41 171.8 136 64.7
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 5.8e-41 171.4 137 64.2
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 7.6e-41 171.0 132 66.7
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 9.9e-41 170.6 137 65.7
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 9.9e-41 170.6 132 66.7
Atru.chr6.2275 Acer truncatum HOM05D004010 ORTHO05D004995 1.7e-40 169.9 132 65.9
Atru.chr6.2368 Acer truncatum HOM05D004010 ORTHO05D004995 1.7e-40 169.9 132 65.9
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 2.2e-40 169.5 132 65.2
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 3.8e-40 168.7 132 63.6
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 4.9e-40 168.3 132 65.2
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 8.4e-40 167.5 146 61.6
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 1.1e-39 167.2 132 64.4
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 7.1e-39 164.5 131 64.9
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 7.1e-39 164.5 132 66.7
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 6.0e-38 161.4 132 62.1
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 1.0e-37 160.6 132 62.1
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 1.7e-37 159.8 149 55.0
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 1.7e-37 159.8 132 61.4
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 1.7e-37 159.8 134 63.4
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 2.3e-37 159.5 153 57.5
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 2.3e-37 159.5 132 61.4
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 3.0e-37 159.1 160 54.4
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 3.9e-37 158.7 132 62.1
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.1e-36 157.1 148 54.1
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 1.9e-36 156.4 133 62.4
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 4.3e-36 155.2 132 63.6
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 5.6e-36 154.8 132 62.1
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 9.6e-36 154.1 132 62.9
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 6.2e-35 151.4 134 59.7
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 1.4e-34 150.2 135 61.5
Ah.06g187170 Amaranthus hybridus HOM05D004010 ORTHO05D004995 1.8e-34 149.8 137 59.9
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 4.0e-34 148.7 137 58.4
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 4.0e-34 148.7 132 59.1
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 5.2e-34 148.3 137 58.4
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 5.2e-34 148.3 137 58.4
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 6.9e-34 147.9 132 58.3
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 1.2e-33 147.1 137 57.7
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 1.2e-33 147.1 137 57.7
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 1.2e-33 147.1 137 57.7
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 1.5e-33 146.7 131 59.5
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 3.4e-33 145.6 129 59.7
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 9.9e-33 144.1 133 58.6
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 8.4e-32 141.0 133 60.9
MBI10_g46391_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 1.4e-31 140.2 133 59.4
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 7.1e-31 137.9 132 56.8
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 7.1e-31 137.9 132 55.3
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 7.1e-31 137.9 131 57.3
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 1.6e-30 136.7 134 56.7
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 1.6e-30 136.7 133 55.6
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 4.6e-30 135.2 133 59.4
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 7.8e-30 134.4 134 56.0
Phvul.004G009127 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 1.3e-29 133.7 134 54.5
FAN14G2166 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.1e-28 130.6 111 62.2
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 2.0e-25 119.8 136 50.0
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 1.3e-24 117.1 101 63.4
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 2.3e-21 106.3 115 46.1
MBI10_g39276_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 2.1e-19 99.8 106 54.7
FvH4_6g51541 Fragaria vesca HOM05D004010 ORTHO05D004995 1.9e-15 86.7 61 72.1
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 2.5e-12 76.3 150 33.3
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 2.1e-11 73.2 111 36.0
HPP92_004913 Vanilla planifolia HOM05D004010 ORTHO05D004995 2.1e-11 73.2 85 51.8
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 5.8e-09 65.1 79 46.8
FvH4_6g51551 Fragaria vesca HOM05D004010 ORTHO05D004995 2.9e-08 62.8 47 68.1


User provided reference genes

Program Settings