Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G473.149 Capsicum annuum HOM05D000007 ORTHO05D000017 3.9e-168 594.7 302 100.0
CAN.G473.137 Capsicum annuum HOM05D000007 ORTHO05D000017 3.5e-76 289.3 314 52.9
Solyc02g094080.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.6e-55 218.4 338 42.6
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-54 217.6 344 43.3
CAN.G1683.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.7e-54 217.2 165 66.7
PGSC0003DMG400042854 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.9e-54 216.5 349 42.4
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-51 207.2 345 39.7
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 3.2e-37 159.8 327 36.4
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-37 159.8 326 36.2
Nitab4.5_0000053g0050 Nicotiana tabacum HOM05D000530 ORTHO05D000017 1.9e-34 150.6 227 44.5
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-32 144.4 297 37.7
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.0e-32 141.7 269 38.3
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-31 141.4 345 33.0
Sopen01g047470 Solanum pennellii HOM05D000007 ORTHO05D000017 1.2e-31 141.4 229 39.7
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 4.5e-31 139.4 386 30.3
Nitab4.5_0005858g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.9e-31 138.3 241 38.6
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 2.2e-30 137.1 353 31.7
Solyc01g104940.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 4.9e-30 136.0 267 34.5
Nitab4.5_0000519g0240 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.4e-30 135.2 206 42.2
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-29 134.8 353 31.7
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-28 131.3 353 31.2
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-28 131.3 343 32.9
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 6.0e-28 129.0 317 32.8
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-27 127.5 316 33.2
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 5.6e-26 122.5 280 32.5
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 9.6e-26 121.7 294 34.7
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.6e-25 120.9 304 29.9
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.7e-25 119.8 324 30.2
CAN.G575.137 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-24 117.9 346 35.0
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 4.0e-24 116.3 306 32.0
CAN.G1799.9 Capsicum annuum HOM05D000007 ORTHO05D000017 4.0e-24 116.3 292 32.5
CAN.G1470.10 Capsicum annuum HOM05D000007 ORTHO05D000017 6.9e-24 115.5 297 31.6
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.2e-23 114.8 326 27.0
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-23 113.6 313 31.0
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 7.6e-23 112.1 292 30.5
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.6e-23 112.1 315 31.1
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.9e-22 110.2 334 32.3
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 3.8e-22 109.8 298 29.5
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.8e-22 109.8 336 29.2
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 4.9e-22 109.4 301 29.6
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 9.3e-21 105.1 318 28.0
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-20 104.0 298 27.2
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.1e-20 104.0 340 31.2
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 7.9e-20 102.1 239 33.5
Nitab4.5_0000437g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-19 101.7 223 37.7
PGSC0003DMG400025404 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.0e-19 100.1 349 28.9
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 3.9e-19 99.8 293 29.7
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.1e-19 99.4 310 29.0
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.7e-19 98.6 303 31.4
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-18 98.2 296 29.4
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-18 97.8 301 29.2
Nitab4.5_0017036g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.3e-18 96.7 215 34.9
Sopen10g029460 Solanum pennellii HOM05D000267 ORTHO05D000298 3.3e-18 96.7 180 41.1
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 5.7e-18 95.9 352 27.6
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.4e-18 95.5 336 27.7
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-17 94.7 265 30.9
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-17 94.7 239 31.0
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 1.6e-17 94.4 352 27.3
Sopen09g001450 Solanum pennellii HOM05D000007 ORTHO05D000017 5.3e-16 89.4 343 28.6
CAN.G1703.14 Capsicum annuum HOM05D000007 ORTHO05D000017 9.0e-16 88.6 235 32.8
CAN.G884.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.2e-15 88.2 286 27.6
Nitab4.5_0000743g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-15 87.8 183 36.1
CAN.G1375.9 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-15 87.4 280 29.3
Sopen09g001370 Solanum pennellii HOM05D000007 ORTHO05D000017 2.0e-15 87.4 344 27.6
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.0e-15 87.4 334 30.2
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.6e-15 87.0 254 31.5
Solyc09g005480.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.4e-15 86.7 338 26.9
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 3.4e-15 86.7 258 27.9
Nitab4.5_0001668g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.5e-15 86.3 150 40.0
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-14 84.7 254 27.6
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.9e-13 80.9 356 27.5
Nitab4.5_0000271g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-13 79.7 145 40.7
Sopen11g007270 Solanum pennellii HOM05D000007 ORTHO05D000017 4.2e-13 79.7 333 26.4
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 5.5e-13 79.3 244 28.3
CAN.G1209.3 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-12 77.0 249 28.9
CAN.G1565.5 Capsicum annuum HOM05D000007 ORTHO05D000017 4.6e-12 76.3 213 31.0
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 4.6e-12 76.3 273 26.7
Nitab4.5_0019486g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.6e-12 76.3 113 46.0
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.6e-12 76.3 275 24.7
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 7.9e-12 75.5 305 25.9
CAN.G851.36 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-11 74.7 265 26.8
CAN.G1186.26 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-11 74.3 277 27.1
Solyc11g012540.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 2.3e-11 73.9 333 26.4
Nitab4.5_0004725g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.9e-11 73.2 144 41.0
PGSC0003DMG400037258 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.1e-11 72.8 129 33.3
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.7e-11 72.0 269 26.8
Solyc09g005770.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.9e-10 70.9 259 25.5
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 1.9e-10 70.9 293 26.6
PGSC0003DMG400042553 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.3e-10 69.7 322 28.3
CAN.G1126.11 Capsicum annuum HOM05D000007 ORTHO05D000017 9.7e-10 68.6 142 33.8
Solyc11g012560.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 8.2e-09 65.5 273 27.5
CAN.G321.65 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-08 64.7 207 26.1
Nitab4.5_0003359g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-08 64.7 183 32.2
PGSC0003DMG400021641 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-08 64.3 335 25.4
CAN.G2702.1 Capsicum annuum HOM05D000007 ORTHO05D000017 3.1e-08 63.5 111 35.1
PGSC0003DMG400045269 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.1e-08 63.5 124 34.7
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.1e-08 63.2 278 25.9
Lj6C667T6 Lonicera japonica HOM05D000007 ORTHO05D000017 5.3e-08 62.8 310 23.2
Dinv38256 Davidia involucrata HOM05D000007 ORTHO05D000017 9.0e-08 62.0 273 27.5
Nitab4.5_0000856g0040 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.0e-08 62.0 135 30.4
CANSAT56G3489 Cannabis sativa HOM05D000007 ORTHO05D000017 1.2e-07 61.6 245 26.5
Sopen11g007280 Solanum pennellii HOM05D000007 ORTHO05D000017 1.2e-07 61.6 145 33.1
CAN.G2075.9 Capsicum annuum HOM05D000007 ORTHO05D000017 1.5e-07 61.2 133 30.1
Lj3P398T11 Lonicera japonica HOM05D000007 ORTHO05D000017 1.5e-07 61.2 297 26.3
Nitab4.5_0000143g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.0e-07 60.8 142 40.1
Nitab4.5_0002499g0130 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.4e-07 60.1 132 30.3
CAN.G1227.3 Capsicum annuum HOM05D000185 ORTHO05D000017 4.5e-07 59.7 246 27.2
Nitab4.5_0001450g0080 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.5e-07 59.7 186 25.3
RcHm_v2.0_Chr2g0131271 Rosa chinensis HOM05D000007 ORTHO05D000039 4.5e-07 59.7 232 24.1
Medtr3g013770 Medicago truncatula HOM05D000007 ORTHO05D000017 7.7e-07 58.9 362 26.0
Solyc09g005520.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.7e-07 58.9 146 29.5
Nitab4.5_0000798g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.0e-06 58.5 277 23.1
Nitab4.5_0000874g0100 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.3e-06 58.2 142 29.6
Lj3C654T7 Lonicera japonica HOM05D000007 ORTHO05D011249 1.7e-06 57.8 258 27.1
Duzib192G0105 Durio zibethinus HOM05D000007 ORTHO05D000017 2.2e-06 57.4 232 27.6
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 2.9e-06 57.0 244 25.8
CAN.G222.149 Capsicum annuum HOM05D001173 ORTHO05D000017 2.9e-06 57.0 156 30.1
Lj2C34G11 Lonicera japonica HOM05D000007 ORTHO05D000017 2.9e-06 57.0 294 23.5
Medtr2g034700 Medicago truncatula HOM05D000007 ORTHO05D000039 2.9e-06 57.0 224 25.0
CAN.G520.10 Capsicum annuum HOM05D000007 ORTHO05D000017 5.0e-06 56.2 129 34.1
Sopen01g003950 Solanum pennellii HOM05D000007 ORTHO05D000017 6.5e-06 55.8 74 41.9


User provided reference genes

Program Settings