Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G47.8 Capsicum annuum HOM05D000252 ORTHO05D003750 5.5e-80 300.8 143 100.0
Peaxi162Scf00835g00014 Petunia axillaris HOM05D000252 ORTHO05D003750 1.4e-59 233.0 143 76.9
Solyc12g042640.1 Solanum lycopersicum HOM05D000252 ORTHO05D003750 1.1e-51 206.8 142 71.1
PGSC0003DMG400028647 Solanum tuberosum HOM05D000252 ORTHO05D003750 1.4e-51 206.5 142 70.4
Sopen12g021790 Solanum pennellii HOM05D000252 ORTHO05D003750 3.1e-51 205.3 142 70.4
Nitab4.5_0001271g0050 Nicotiana tabacum HOM05D000252 ORTHO05D003750 3.5e-50 201.8 122 77.9
Dinv23287 Davidia involucrata HOM05D000252 ORTHO05D003750 7.0e-43 177.6 135 60.7
CSS0000957 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D003750 1.6e-42 176.4 138 56.5
Cfa017789 Carpinus fangiana HOM05D000252 ORTHO05D003750 3.5e-42 175.3 138 56.5
Ah.14g085740 Amaranthus hybridus HOM05D000252 ORTHO05D003750 2.9e-41 172.2 138 57.2
CiPaw.16G072200 Carya illinoinensis HOM05D000252 ORTHO05D003750 3.8e-41 171.8 137 56.2
CSS0037678 Camellia sinensis var. sinensis HOM05D000252 ORTHO05D003750 6.5e-41 171.0 139 54.0
Prupe.5G242400 Prunus persica HOM05D000252 ORTHO05D003750 6.5e-41 171.0 139 55.4
Glyma.16G216200 Glycine max HOM05D000252 ORTHO05D003750 8.6e-41 170.6 137 55.5
MD06G1238500 Malus domestica HOM05D000252 ORTHO05D003750 8.6e-41 170.6 139 55.4
VMungo0464G0299 Vigna mungo HOM05D000252 ORTHO05D003750 1.1e-40 170.2 137 55.5
Duzib205G1277 Durio zibethinus HOM05D000252 ORTHO05D003750 1.5e-40 169.9 141 53.2
Gohir.D04G187600 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.5e-40 169.9 141 54.6
Gohir.D07G125900 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.5e-40 169.9 141 53.2
Gorai.012G180800 Gossypium raimondii HOM05D000252 ORTHO05D003750 1.5e-40 169.9 141 54.6
Rhsim12G0136800 Rhododendron simsii HOM05D000252 ORTHO05D003750 1.5e-40 169.9 137 55.5
TWI15G0890 Tripterygium wilfordii HOM05D000252 ORTHO05D003750 1.5e-40 169.9 139 54.7
Phvul.004G141700 Phaseolus vulgaris HOM05D000252 ORTHO05D003750 1.9e-40 169.5 137 54.7
MD14G1244800 Malus domestica HOM05D000252 ORTHO05D003750 3.3e-40 168.7 139 55.4
Thecc.03G072500 Theobroma cacao HOM05D000252 ORTHO05D003750 3.3e-40 168.7 141 53.2
Lj2g0009530 Lotus japonicus HOM05D000252 ORTHO05D003750 4.2e-40 168.3 137 54.7
Potri.015G028900 Populus trichocarpa HOM05D000252 ORTHO05D003750 4.2e-40 168.3 137 53.3
Sabra15G0024000 Salix brachista HOM05D000252 ORTHO05D003750 4.2e-40 168.3 137 52.6
Lalb_Chr24g0398501 Lupinus albus HOM05D000252 ORTHO05D003750 5.5e-40 167.9 137 54.0
Sed0008072 Sechium edule HOM05D000252 ORTHO05D003750 5.5e-40 167.9 139 54.0
Aqoxy3G04245 Aquilegia oxysepala HOM05D000252 ORTHO05D003750 9.5e-40 167.2 137 54.7
Oeu034435.1 Olea europaea HOM05D000252 ORTHO05D003750 9.5e-40 167.2 139 52.5
Actinidia18874 Actinidia chinensis HOM05D000252 ORTHO05D003750 1.2e-39 166.8 139 54.0
Lalb_Chr14g0370331 Lupinus albus HOM05D000252 ORTHO05D003750 1.2e-39 166.8 136 52.9
Eucgr.I02747 Eucalyptus grandis HOM05D000252 ORTHO05D003750 1.6e-39 166.4 137 54.7
TWI81G0629 Tripterygium wilfordii HOM05D000252 ORTHO05D003750 1.6e-39 166.4 139 54.7
arahy.Tifrunner.gnm1.ann1.GR2Q8K Arachis hypogaea HOM05D000252 ORTHO05D003750 2.1e-39 166.0 137 51.8
arahy.Tifrunner.gnm1.ann1.KRCN8E Arachis hypogaea HOM05D000252 ORTHO05D003750 2.1e-39 166.0 137 51.8
vmacro16393 Vaccinium macrocarpon HOM05D000252 ORTHO05D003750 2.1e-39 166.0 137 54.7
ATR0568G038 Amborella trichopoda HOM05D000252 ORTHO05D003750 2.8e-39 165.6 139 51.1
Cc04_g05070 Coffea canephora HOM05D000252 ORTHO05D003750 2.8e-39 165.6 138 58.0
Oeu016048.1 Olea europaea HOM05D000252 ORTHO05D003750 2.8e-39 165.6 138 52.9
Cc04_g08590 Coffea canephora HOM05D000252 ORTHO05D003750 6.1e-39 164.5 139 53.2
MELO3C001948.2 Cucumis melo HOM05D000252 ORTHO05D003750 6.1e-39 164.5 139 54.0
CsaV3_1G005100 Cucumis sativus L. HOM05D000252 ORTHO05D003750 6.1e-39 164.5 139 54.0
Migut.D02061 Erythranthe guttata HOM05D000252 ORTHO05D003750 6.1e-39 164.5 139 50.4
TAR629G1058 Trochodendron aralioides HOM05D000252 ORTHO05D003750 6.1e-39 164.5 137 53.3
Ciclev10020565m.g Citrus clementina HOM05D000252 ORTHO05D003750 8.0e-39 164.1 137 53.3
Glyma.09G166100 Glycine max HOM05D000252 ORTHO05D003750 8.0e-39 164.1 136 54.4
EL10Ac1g01582 Beta vulgaris HOM05D000252 ORTHO05D003750 1.0e-38 163.7 138 52.9
AUR62042162 Chenopodium quinoa HOM05D000252 ORTHO05D003750 1.0e-38 163.7 137 53.3
RcHm_v2.0_Chr6g0266921 Rosa chinensis HOM05D000252 ORTHO05D003750 1.0e-38 163.7 139 54.0
THA.LOC104799962 Tarenaya hassleriana HOM05D000252 ORTHO05D003750 1.0e-38 163.7 143 51.7
Medtr6g081020 Medicago truncatula HOM05D000252 ORTHO05D003750 1.4e-38 163.3 137 53.3
TPR.G24058 Trifolium pratense HOM05D000252 ORTHO05D003750 1.4e-38 163.3 137 54.0
HanXRQChr17g0545691 Helianthus annuus HOM05D000252 ORTHO05D003750 1.8e-38 162.9 141 51.1
Nn8g40351 Nelumbo nucifera HOM05D000252 ORTHO05D003750 2.3e-38 162.5 138 53.6
SGA_v2.0_scaffold164G38108 Striga asiatica HOM05D000252 ORTHO05D003750 2.3e-38 162.5 138 51.4
ClCG04G012600 Citrullus lanatus HOM05D000252 ORTHO05D003750 4.0e-38 161.8 139 51.8
GSVIVG01008620001 Vitis vinifera HOM05D000252 ORTHO05D003750 4.0e-38 161.8 142 50.7
ECA232G1736 Erigeron canadensis HOM05D000252 ORTHO05D003750 5.2e-38 161.4 141 52.5
PGR142G1142 Punica granatum HOM05D000252 ORTHO05D003750 6.8e-38 161.0 137 51.8
Atru.chr9.356 Acer truncatum HOM05D000252 ORTHO05D003750 8.9e-38 160.6 137 53.3
MSTRG.9711 Avicennia marina HOM05D000252 ORTHO05D003750 1.2e-37 160.2 139 50.4
Actinidia25482 Actinidia chinensis HOM05D000252 ORTHO05D003750 2.0e-37 159.5 141 52.5
CANSAT78G0333 Cannabis sativa HOM05D000252 ORTHO05D003750 2.0e-37 159.5 137 49.6
Solyc03g098460.3 Solanum lycopersicum HOM05D000252 ORTHO05D003750 2.0e-37 159.5 137 53.3
PGSC0003DMG400010157 Solanum tuberosum HOM05D000252 ORTHO05D003750 2.0e-37 159.5 137 53.3
Peaxi162Scf00171g00341 Petunia axillaris HOM05D000252 ORTHO05D003750 2.6e-37 159.1 137 53.3
Nitab4.5_0004612g0050 Nicotiana tabacum HOM05D000252 ORTHO05D003750 3.4e-37 158.7 137 53.3
Aa31LG3G2830 Aethionema arabicum HOM05D000252 ORTHO05D003750 4.4e-37 158.3 136 52.2
FAN04G2881 Fragaria x ananassa HOM05D000252 ORTHO05D003750 4.4e-37 158.3 139 51.8
SalBow8G5481 Salvia bowleyana HOM05D000252 ORTHO05D003750 4.4e-37 158.3 139 50.4
SGA_v2.0_scaffold335G49119 Striga asiatica HOM05D004919 ORTHO05D003750 4.4e-37 158.3 138 50.0
Thhalv10025479m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 5.7e-37 157.9 138 51.4
FvH4_5g31670 Fragaria vesca HOM05D000252 ORTHO05D003750 5.7e-37 157.9 139 51.8
FAN18G0687 Fragaria x ananassa HOM05D000252 ORTHO05D003750 5.7e-37 157.9 139 51.8
Sopen03g029200 Solanum pennellii HOM05D000252 ORTHO05D003750 5.7e-37 157.9 137 52.6
Nitab4.5_0000782g0210 Nicotiana tabacum HOM05D000252 ORTHO05D003750 7.5e-37 157.5 137 52.6
CAN.G929.31 Capsicum annuum HOM05D000252 ORTHO05D003750 1.7e-36 156.4 137 52.6
MBI06_g12841_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D003750 1.7e-36 156.4 139 48.9
Sp7g25730 Schrenkiella parvula HOM05D000252 ORTHO05D003750 1.7e-36 156.4 138 50.7
Lj5C167G0 Lonicera japonica HOM05D000252 ORTHO05D003750 4.9e-36 154.8 159 46.5
Rhsim08G0206000 Rhododendron simsii HOM05D000252 ORTHO05D003750 4.9e-36 154.8 141 50.4
BcaC06g32666 Brassica carinata HOM05D000252 ORTHO05D003750 8.3e-36 154.1 141 49.6
Aa31LG3G9380 Aethionema arabicum HOM05D000252 ORTHO05D003750 1.4e-35 153.3 139 49.6
CARHR235490 Cardamine hirsuta HOM05D000252 ORTHO05D003750 1.4e-35 153.3 138 50.0
Os02g0116500 Oryza sativa ssp. japonica HOM05D000252 ORTHO05D003750 1.4e-35 153.3 136 50.0
Zm00001eb209490 Zea mays HOM05D000252 ORTHO05D003750 1.4e-35 153.3 136 51.5
AT5G53090 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 1.8e-35 152.9 139 48.9
Potri.003G182000 Populus trichocarpa HOM05D000252 ORTHO05D003750 1.8e-35 152.9 136 48.5
Zm00001eb229940 Zea mays HOM05D000252 ORTHO05D003750 2.4e-35 152.5 136 50.7
PSO782G5092 Papaver somniferum HOM05D000252 ORTHO05D003750 3.1e-35 152.1 136 52.2
Sabra01G0031000 Salix brachista HOM05D000252 ORTHO05D003750 3.1e-35 152.1 136 49.3
A01p19220 Brassica napus HOM05D000252 ORTHO05D003750 4.1e-35 151.8 138 50.0
BraA01t01864Z Brassica rapa HOM05D000252 ORTHO05D003750 4.1e-35 151.8 138 50.0
PSO063G3479 Papaver somniferum HOM05D000252 ORTHO05D003750 4.1e-35 151.8 139 51.1
Carub.0007s1305 Capsella rubella HOM05D000252 ORTHO05D003750 5.4e-35 151.4 138 50.0
BcaNung01622 Brassica carinata HOM05D000252 ORTHO05D003750 7.0e-35 151.0 138 50.0
THA.LOC104811907 Tarenaya hassleriana HOM05D000252 ORTHO05D003750 7.0e-35 151.0 135 48.9
CARHR266110 Cardamine hirsuta HOM05D000252 ORTHO05D003750 9.2e-35 150.6 137 46.7
HanXRQChr07g0200641 Helianthus annuus HOM05D000252 ORTHO05D003750 1.2e-34 150.2 136 46.3
Lsat_1_v5_gn_0_10320 Lactuca sativa HOM05D000252 ORTHO05D003750 1.6e-34 149.8 139 49.6
AL7G24890 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 2.0e-34 149.4 138 50.0
AT4G27760 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 2.7e-34 149.1 138 49.3
Thhalv10013865m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 2.7e-34 149.1 137 46.0
unitig_0.g29 Utricularia gibba HOM05D002770 ORTHO05D003750 3.5e-34 148.7 143 45.5
BcaC09g50539 Brassica carinata HOM05D000252 ORTHO05D003750 4.5e-34 148.3 138 49.3
C01p24150 Brassica napus HOM05D000252 ORTHO05D003750 4.5e-34 148.3 138 49.3
BolC1t02372H Brassica oleracea HOM05D000252 ORTHO05D003750 4.5e-34 148.3 138 49.3
C07p55690 Brassica napus HOM05D000252 ORTHO05D003750 5.9e-34 147.9 135 48.9
Sp6g15260 Schrenkiella parvula HOM05D000252 ORTHO05D003750 5.9e-34 147.9 141 45.4
vmacro19054 Vaccinium macrocarpon HOM05D000252 ORTHO05D003750 5.9e-34 147.9 135 49.6
Thhalv10013852m.g Eutrema salsugineum HOM05D000252 ORTHO05D003750 1.0e-33 147.1 137 48.2
AL8G27720 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 1.3e-33 146.7 139 46.8
BcaB05g22008 Brassica carinata HOM05D000252 ORTHO05D003750 1.3e-33 146.7 139 47.5
BcaB05g22011 Brassica carinata HOM05D000252 ORTHO05D003750 1.3e-33 146.7 139 47.5
BcaC03g14457 Brassica carinata HOM05D000252 ORTHO05D003750 1.3e-33 146.7 139 47.5
MSTRG.4321 Avicennia marina HOM05D000252 ORTHO05D003750 1.7e-33 146.4 129 50.4
A02p11300 Brassica napus HOM05D000252 ORTHO05D003750 1.7e-33 146.4 139 47.5
C02p18680 Brassica napus HOM05D000252 ORTHO05D003750 1.7e-33 146.4 139 47.5
BraA03t10830Z Brassica rapa HOM05D000252 ORTHO05D003750 1.7e-33 146.4 137 45.3
Carub.0008s1329 Capsella rubella HOM05D000252 ORTHO05D003750 2.3e-33 146.0 139 44.6
Sabra03G0132900 Salix brachista HOM05D000252 ORTHO05D003750 2.3e-33 146.0 136 46.3
FAN08G1937 Fragaria x ananassa HOM05D000252 ORTHO05D003750 2.9e-33 145.6 131 51.9
CAN.G1635.19 Capsicum annuum HOM05D000252 ORTHO05D003750 2.5e-32 142.5 132 50.8
DCAR_023253 Daucus carota HOM05D000252 ORTHO05D003750 9.5e-32 140.6 141 46.1
BcaC01g06222 Brassica carinata HOM05D000223 ORTHO05D003750 1.6e-31 139.8 135 44.4
C03p17970 Brassica napus HOM05D000223 ORTHO05D003750 1.6e-31 139.8 135 44.4
SEGI_23143 Sequoiadendron giganteum HOM05D000252 ORTHO05D003750 3.6e-31 138.7 137 43.1
BolC3t14203H Brassica oleracea HOM05D000223 ORTHO05D003750 4.7e-31 138.3 135 44.4
A03p15370 Brassica napus HOM05D000223 ORTHO05D003750 8.0e-31 137.5 134 43.3
Aa31LG3G9370 Aethionema arabicum HOM05D000252 ORTHO05D003750 1.0e-30 137.1 131 48.9
BraA02t06192Z Brassica rapa HOM05D000252 ORTHO05D003750 1.0e-30 137.1 132 48.5
BolC2t08013H Brassica oleracea HOM05D000252 ORTHO05D003750 8.9e-30 134.0 132 47.0
Manes.16G063200 Manihot esculenta HOM05D000252 ORTHO05D003750 8.9e-30 134.0 129 46.5
Rhsim08G0206100 Rhododendron simsii HOM05D000252 ORTHO05D003750 8.9e-30 134.0 135 45.2
AL8G27730 Arabidopsis lyrata HOM05D000252 ORTHO05D003750 1.2e-29 133.7 140 40.7
AT5G53100 Arabidopsis thaliana HOM05D000252 ORTHO05D003750 2.0e-29 132.9 137 44.5
CDE04G1927 Ceratophyllum demersum HOM05D000252 ORTHO05D003750 4.4e-29 131.7 141 41.8
CARHR266120 Cardamine hirsuta HOM05D000252 ORTHO05D003750 5.8e-29 131.3 142 43.0
SHI19115 Sapria himalayana HOM05D000252 ORTHO05D003750 3.2e-27 125.6 131 48.9
Carub.0008s1330 Capsella rubella HOM05D000252 ORTHO05D003750 7.0e-27 124.4 145 42.8
BolC7t46050H Brassica oleracea HOM05D000252 ORTHO05D003750 7.8e-26 120.9 106 50.0
AUR62022404 Chenopodium quinoa HOM05D000252 ORTHO05D003750 7.8e-26 120.9 236 30.5
Cpa.g.sc111.29 Carica papaya HOM05D000252 ORTHO05D003750 1.9e-24 116.3 88 53.4
Haze_18426 Corylus avellana HOM05D000252 ORTHO05D003750 4.3e-24 115.2 83 59.0
Gohir.A07G121550 Gossypium hirsutum HOM05D000252 ORTHO05D003750 4.3e-24 115.2 87 57.5
Gorai.001G135800 Gossypium raimondii HOM05D000252 ORTHO05D003750 5.6e-24 114.8 87 56.3
QL10p034588 Quercus lobata HOM05D000252 ORTHO05D003750 7.3e-24 114.4 84 58.3
Pp3c11_570 Physcomitrium patens HOM05D000252 ORTHO05D003750 7.5e-21 104.4 129 36.4
SMO164G0127 Selaginella moellendorffii HOM05D000252 ORTHO05D003750 5.4e-19 98.2 128 35.2
Mapoly0054s0023 Marchantia polymorpha HOM05D000252 ORTHO05D003750 1.1e-16 90.5 131 32.8
A03p57490 Brassica napus HOM05D000252 ORTHO05D003750 1.4e-14 83.6 130 36.2
AagrBONN_evm.TU.Sc2ySwM_368.186 Anthoceros agrestis HOM05D000252 ORTHO05D003750 2.3e-14 82.8 131 29.8
Pp3c22_17570 Physcomitrium patens HOM05D000252 ORTHO05D003750 8.3e-12 74.3 124 28.2
RcHm_v2.0_Chr7g0227461 Rosa chinensis HOM05D000252 ORTHO05D003750 7.1e-11 71.2 96 39.6
MBI18_g11227_MAGBIO Magnolia biondii HOM05D000252 ORTHO05D003750 1.0e-09 67.4 112 32.1
Gohir.A07G121600 Gossypium hirsutum HOM05D000252 ORTHO05D003750 1.5e-08 63.5 60 46.7
Haze_18427 Corylus avellana HOM05D000252 ORTHO05D003750 1.9e-08 63.2 57 49.1
TAR626G1785 Trochodendron aralioides HOM05D000252 ORTHO05D003750 2.1e-07 59.7 118 31.4
Gorai.001G135900 Gossypium raimondii HOM05D000252 ORTHO05D003750 2.8e-07 59.3 54 48.1
Aqoxy1G01664 Aquilegia oxysepala HOM05D000252 ORTHO05D003750 3.6e-07 58.9 123 30.9
Aqoxy1G01666 Aquilegia oxysepala HOM05D000252 ORTHO05D003750 3.6e-07 58.9 117 29.1
Nn4g26624 Nelumbo nucifera HOM05D000252 ORTHO05D003750 1.8e-06 56.6 129 27.9
MD02G1050600 Malus domestica HOM05D000252 ORTHO05D003750 6.8e-06 54.7 42 59.5
Nn3g20372 Nelumbo nucifera HOM05D000252 ORTHO05D003750 6.8e-06 54.7 119 30.3


User provided reference genes

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