Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 1.1e-138 496.5 227 100.0
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.0e-116 422.5 207 92.8
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 9.8e-116 420.2 207 92.8
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 4.9e-115 417.9 207 92.3
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 4.6e-113 411.4 207 89.4
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 6.6e-112 407.5 207 90.8
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 1.3e-104 383.3 207 81.2
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 6.6e-104 380.9 207 82.1
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 5.6e-103 377.9 205 80.5
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 1.2e-102 376.7 205 80.5
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 2.8e-102 375.6 205 79.5
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 4.7e-102 374.8 207 79.7
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.1e-101 373.6 207 79.2
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.8e-101 372.9 207 83.6
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 6.8e-101 370.9 207 78.7
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 2.0e-100 369.4 206 77.7
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 5.8e-100 367.9 205 78.0
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 7.6e-100 367.5 205 78.5
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 7.6e-100 367.5 206 78.6
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 6.4e-99 364.4 207 78.7
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 1.1e-98 363.6 205 77.1
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.4e-98 363.2 207 77.8
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 4.2e-98 361.7 207 73.4
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 5.4e-98 361.3 205 77.6
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 5.4e-98 361.3 206 78.2
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 9.3e-98 360.5 207 77.3
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.2e-97 360.1 209 76.1
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.6e-97 359.8 205 75.1
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 2.1e-97 359.4 205 76.1
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 2.7e-97 359.0 207 75.8
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 2.7e-97 359.0 207 76.3
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 3.5e-97 358.6 208 76.0
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 3.5e-97 358.6 205 77.6
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 4.6e-97 358.2 206 76.2
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 7.8e-97 357.5 207 76.8
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.0e-96 357.1 205 76.1
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 1.7e-96 356.3 207 76.3
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 2.3e-96 355.9 206 76.7
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 2.3e-96 355.9 207 75.4
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 2.3e-96 355.9 207 75.4
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 2.3e-96 355.9 206 73.3
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 3.0e-96 355.5 208 75.0
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 3.0e-96 355.5 207 75.4
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 3.9e-96 355.1 208 75.0
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 3.9e-96 355.1 208 75.0
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 3.9e-96 355.1 208 75.0
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 3.9e-96 355.1 208 75.0
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 3.9e-96 355.1 199 77.9
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 3.9e-96 355.1 207 74.9
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 5.1e-96 354.8 199 75.9
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 6.6e-96 354.4 209 73.2
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 6.6e-96 354.4 206 75.7
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 6.6e-96 354.4 207 74.9
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 8.7e-96 354.0 208 74.5
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 8.7e-96 354.0 205 75.1
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.1e-95 353.6 208 74.5
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.1e-95 353.6 207 74.9
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.5e-95 353.2 208 75.0
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 1.5e-95 353.2 207 74.9
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.9e-95 352.8 206 75.7
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.9e-95 352.8 208 75.0
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.9e-95 352.8 198 76.8
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 4.3e-95 351.7 208 75.0
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 4.3e-95 351.7 205 74.6
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 5.6e-95 351.3 203 75.9
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 7.3e-95 350.9 208 74.5
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.3e-94 350.1 219 71.7
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 1.3e-94 350.1 205 74.6
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 3.6e-94 348.6 208 73.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 3.6e-94 348.6 205 75.1
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 4.8e-94 348.2 208 74.0
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.8e-94 348.2 199 76.9
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 8.1e-94 347.4 199 74.4
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 8.1e-94 347.4 207 72.9
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 8.1e-94 347.4 208 72.6
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 1.1e-93 347.1 205 72.7
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.4e-93 346.7 199 76.4
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 3.1e-93 345.5 208 72.6
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 5.3e-93 344.7 220 71.4
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 5.3e-93 344.7 199 74.4
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 5.3e-93 344.7 205 74.6
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 6.9e-93 344.4 205 73.7
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.0e-93 344.0 199 73.9
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 2.0e-92 342.8 225 68.4
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 2.0e-92 342.8 199 73.9
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 2.0e-92 342.8 205 73.2
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 2.0e-92 342.8 202 74.3
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 2.6e-92 342.4 199 75.9
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 2.6e-92 342.4 207 73.9
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 4.4e-92 341.7 205 73.2
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 5.8e-92 341.3 199 73.4
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 7.6e-92 340.9 205 73.2
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 9.9e-92 340.5 205 71.7
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.7e-91 339.7 198 74.7
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 1.9e-90 336.3 205 70.7
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 5.4e-90 334.7 207 68.1
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 3.5e-89 332.0 205 71.7
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.7e-88 329.7 191 74.3
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 4.0e-85 318.5 205 69.3
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 6.9e-85 317.8 205 70.2
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 3.4e-84 315.5 205 69.3
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-83 311.6 217 64.5
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.4e-82 310.1 205 67.3
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 7.9e-81 304.3 206 68.0
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 6.9e-77 291.2 205 59.5
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 9.6e-71 270.8 209 56.9
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.3e-70 270.4 208 54.3
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 9.0e-69 264.2 199 56.8
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.5e-68 263.5 200 56.0
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 1.9e-66 256.5 202 54.5
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 2.5e-63 246.1 130 82.3
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 7.4e-63 244.6 146 75.3
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 1.1e-58 230.7 130 74.6
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 5.5e-58 228.4 129 74.4
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.4e-53 213.0 167 59.3
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.7e-51 206.8 165 52.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 8.8e-48 194.5 130 60.0
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 6.5e-43 178.3 205 45.9
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 5.7e-39 165.2 100 72.0
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 4.1e-37 159.1 98 69.4
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 1.5e-26 124.0 73 69.9
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 8.3e-22 108.2 109 52.3
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 5.6e-18 95.5 55 67.3
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 7.5e-15 85.1 55 65.5
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 4.0e-08 62.8 37 75.7


User provided reference genes

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