Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G468.9 Capsicum annuum HOM05D005677 ORTHO05D006966 2.4e-34 148.3 74 100.0
CAN.G358.85 Capsicum annuum HOM05D005677 ORTHO05D006966 2.8e-19 98.2 60 78.3
Nitab4.5_0001385g0030 Nicotiana tabacum HOM05D005677 ORTHO05D006966 1.1e-18 96.3 60 75.0
Nitab4.5_0000178g0070 Nicotiana tabacum HOM05D005677 ORTHO05D006966 1.8e-18 95.5 60 76.7
Solyc02g085210.1 Solanum lycopersicum HOM05D005677 ORTHO05D006966 5.3e-18 94.0 60 75.0
Sopen02g029910 Solanum pennellii HOM05D005677 ORTHO05D006966 1.2e-17 92.8 60 73.3
PGSC0003DMG400003597 Solanum tuberosum HOM05D005677 ORTHO05D006966 1.2e-17 92.8 60 73.3
Peaxi162Scf00366g10014 Petunia axillaris HOM05D005677 ORTHO05D006966 8.4e-16 86.7 60 70.0
Oeu042263.1 Olea europaea HOM05D005677 ORTHO05D006966 1.0e-13 79.7 60 60.0
Potri.007G025600 Populus trichocarpa HOM05D005677 ORTHO05D006966 3.9e-13 77.8 60 58.3
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 1.1e-12 76.3 57 64.9
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 1.5e-12 75.9 60 60.0
MBI03_g28536_MAGBIO Magnolia biondii HOM05D005677 ORTHO05D006966 1.5e-12 75.9 57 61.4
Atru.chr3.573 Acer truncatum HOM05D005677 ORTHO05D006966 3.3e-12 74.7 57 59.6
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 3.3e-12 74.7 57 66.7
Duzib147G0715 Durio zibethinus HOM05D005677 ORTHO05D006966 3.3e-12 74.7 60 55.0
Oeu033645.1 Olea europaea HOM05D005677 ORTHO05D006966 4.3e-12 74.3 60 56.7
Sabra07G0022600 Salix brachista HOM05D005677 ORTHO05D006966 1.3e-11 72.8 60 53.3
Lsat_1_v5_gn_4_152101 Lactuca sativa HOM05D005677 ORTHO05D006966 2.8e-11 71.6 60 58.3
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 3.7e-11 71.2 57 57.9
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 3.7e-11 71.2 62 54.8
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 3.7e-11 71.2 57 56.1
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 4.8e-11 70.9 57 59.6
CANSAT01G0942 Cannabis sativa HOM05D005677 ORTHO05D006966 4.8e-11 70.9 57 56.1
COL.COLO4_22080 Corchorus olitorius HOM05D005677 ORTHO05D006966 4.8e-11 70.9 53 58.5
Dinv39987 Davidia involucrata HOM05D005677 ORTHO05D006966 6.2e-11 70.5 57 57.9
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 6.2e-11 70.5 57 54.4
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 6.2e-11 70.5 57 54.4
Cfa004307 Carpinus fangiana HOM05D005677 ORTHO05D006966 8.1e-11 70.1 57 59.6
HanXRQChr09g0261461 Helianthus annuus HOM05D005677 ORTHO05D006966 8.1e-11 70.1 60 55.0
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 1.4e-10 69.3 57 57.9
MD15G1261800 Malus domestica HOM05D005677 ORTHO05D006966 1.8e-10 68.9 57 56.1
vmacro17831 Vaccinium macrocarpon HOM05D005677 ORTHO05D006966 3.1e-10 68.2 58 55.2
unitig_32.g11368 Utricularia gibba HOM05D005677 ORTHO05D006966 4.0e-10 67.8 49 65.3
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 5.3e-10 67.4 57 52.6
Gohir.D11G190800 Gossypium hirsutum HOM05D005677 ORTHO05D006966 5.3e-10 67.4 57 49.1
Gorai.007G203300 Gossypium raimondii HOM05D005677 ORTHO05D006966 6.9e-10 67.0 57 49.1
Prupe.7G154600 Prunus persica HOM05D005677 ORTHO05D006966 6.9e-10 67.0 57 54.4
Thecc.01G035800 Theobroma cacao HOM05D005677 ORTHO05D006966 9.0e-10 66.6 57 49.1
Rhsim08G0117300 Rhododendron simsii HOM05D000412 ORTHO05D002774 1.5e-09 65.9 58 55.2
DCAR_025942 Daucus carota HOM05D005677 ORTHO05D006966 2.0e-09 65.5 59 52.5
arahy.Tifrunner.gnm1.ann1.V4VRBH Arachis hypogaea HOM05D005677 ORTHO05D006966 2.6e-09 65.1 60 51.7
CiPaw.01G038100 Carya illinoinensis HOM05D005677 ORTHO05D006966 3.4e-09 64.7 57 50.9
AUR62004051 Chenopodium quinoa HOM05D005677 ORTHO05D006966 3.4e-09 64.7 57 50.9
AUR62007566 Chenopodium quinoa HOM05D005677 ORTHO05D006966 3.4e-09 64.7 57 50.9
Cc06_g21220 Coffea canephora HOM05D005677 ORTHO05D006966 3.4e-09 64.7 58 53.4
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 3.4e-09 64.7 57 54.4
SEGI_16522 Sequoiadendron giganteum HOM05D005677 ORTHO05D006966 3.4e-09 64.7 54 57.4
Ah.03g140850 Amaranthus hybridus HOM05D005677 ORTHO05D006966 4.5e-09 64.3 57 50.9
ECA232G2278 Erigeron canadensis HOM05D005677 ORTHO05D006966 4.5e-09 64.3 60 55.0
PSO210G3110 Papaver somniferum HOM05D005677 ORTHO05D006966 4.5e-09 64.3 60 50.0
TWI53G0229 Tripterygium wilfordii HOM05D005677 ORTHO05D006966 4.5e-09 64.3 57 52.6
Haze_15089 Corylus avellana HOM05D005677 ORTHO05D006966 5.8e-09 63.9 54 57.4
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 5.8e-09 63.9 58 55.2
LjContig00448g0024692 Lotus japonicus HOM05D005677 ORTHO05D006966 5.8e-09 63.9 60 48.3
PSO731G0124 Papaver somniferum HOM05D005677 ORTHO05D006966 5.8e-09 63.9 60 50.0
Aa31LG4G18970 Aethionema arabicum HOM05D005677 ORTHO05D006966 7.6e-09 63.5 62 50.0
Ciclev10026228m.g Citrus clementina HOM05D005677 ORTHO05D006966 7.6e-09 63.5 50 60.0
Thhalv10010630m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 7.6e-09 63.5 60 48.3
Lalb_Chr16g0388501 Lupinus albus HOM05D005677 ORTHO05D006966 7.6e-09 63.5 60 50.0
arahy.Tifrunner.gnm1.ann1.6977IM Arachis hypogaea HOM05D005677 ORTHO05D006966 1.0e-08 63.2 60 50.0
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 1.0e-08 63.2 54 57.4
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 1.3e-08 62.8 57 52.6
HPP92_019510 Vanilla planifolia HOM05D005677 ORTHO05D006966 1.3e-08 62.8 54 55.6
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.7e-08 62.4 60 50.0
Manes.01G135600 Manihot esculenta HOM05D005677 ORTHO05D006966 1.7e-08 62.4 56 51.8
AL8G23360 Arabidopsis lyrata HOM05D005677 ORTHO05D006966 2.2e-08 62.0 61 45.9
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 2.2e-08 62.0 60 46.7
Sp7g14210 Schrenkiella parvula HOM05D005677 ORTHO05D006966 2.2e-08 62.0 60 48.3
ATR0772G168 Amborella trichopoda HOM05D005677 ORTHO05D006966 2.9e-08 61.6 59 47.5
C08p26060 Brassica napus HOM05D005677 ORTHO05D006966 3.8e-08 61.2 60 51.7
DCAR_025564 Daucus carota HOM05D005677 ORTHO05D006966 3.8e-08 61.2 57 47.4
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 3.8e-08 61.2 57 52.6
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 4.9e-08 60.8 60 46.7
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 4.9e-08 60.8 60 50.0
CARHR160400 Cardamine hirsuta HOM05D005677 ORTHO05D006966 6.5e-08 60.5 60 48.3
Gohir.A11G184300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 6.5e-08 60.5 57 45.6
ClCG01G019540 Citrullus lanatus HOM05D005677 ORTHO05D006966 8.4e-08 60.1 57 52.6
FAN28G0162 Fragaria x ananassa HOM05D005677 ORTHO05D006966 8.4e-08 60.1 57 50.9
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 8.4e-08 60.1 57 50.9
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 1.1e-07 59.7 57 49.1
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 1.1e-07 59.7 57 50.9
BolC8t50224H Brassica oleracea HOM05D005677 ORTHO05D006966 1.4e-07 59.3 60 48.3
MELO3C007826.2 Cucumis melo HOM05D005677 ORTHO05D006966 1.4e-07 59.3 60 50.0
Eucgr.H01270 Eucalyptus grandis HOM05D005677 ORTHO05D006966 1.4e-07 59.3 61 50.8
Eucgr.L02813 Eucalyptus grandis HOM05D005677 ORTHO05D006966 1.4e-07 59.3 61 50.8
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 1.4e-07 59.3 57 50.9
BcaB01g00573 Brassica carinata HOM05D005677 ORTHO05D006966 1.9e-07 58.9 57 50.9
BcaC07g39550 Brassica carinata HOM05D005677 ORTHO05D006966 1.9e-07 58.9 60 48.3
Thhalv10027491m.g Eutrema salsugineum HOM05D005677 ORTHO05D006966 1.9e-07 58.9 60 46.7
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 1.9e-07 58.9 60 46.7
THA.LOC109115976 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 1.9e-07 58.9 60 50.0
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 2.5e-07 58.5 61 44.3
AT5G49560 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 2.5e-07 58.5 57 47.4
Sc16g0002730 Simmondsia chinensis HOM05D003467 ORTHO05D004220 2.5e-07 58.5 57 47.4
THA.LOC104821292 Tarenaya hassleriana HOM05D005677 ORTHO05D006966 2.5e-07 58.5 60 50.0
A09p43960 Brassica napus HOM05D005677 ORTHO05D006966 3.2e-07 58.2 54 51.9
BraA09t39853Z Brassica rapa HOM05D005677 ORTHO05D006966 3.2e-07 58.2 54 51.9
CsaV3_6G046230 Cucumis sativus L. HOM05D005677 ORTHO05D006966 3.2e-07 58.2 60 50.0
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.2e-07 58.2 57 49.1
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 3.2e-07 58.2 60 48.3
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 4.2e-07 57.8 60 46.7
CARHR281190 Cardamine hirsuta HOM05D005677 ORTHO05D006966 5.5e-07 57.4 56 51.8
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 1.2e-06 56.2 57 47.4
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 1.2e-06 56.2 57 47.4
BcaC09g50274 Brassica carinata HOM05D005677 ORTHO05D006966 1.6e-06 55.8 60 43.3
BcaC09g50280 Brassica carinata HOM05D005677 ORTHO05D006966 1.6e-06 55.8 60 43.3
C01p27040 Brassica napus HOM05D005677 ORTHO05D006966 1.6e-06 55.8 60 43.3
BolC1t02652H Brassica oleracea HOM05D005677 ORTHO05D006966 1.6e-06 55.8 60 43.3
Sed0020674 Sechium edule HOM05D005677 ORTHO05D006966 1.6e-06 55.8 50 52.0
A01p21690 Brassica napus HOM05D005677 ORTHO05D006966 2.7e-06 55.1 57 45.6
BraA01t02078Z Brassica rapa HOM05D005677 ORTHO05D006966 2.7e-06 55.1 57 45.6
Carub.0008s2796 Capsella rubella HOM05D005677 ORTHO05D006966 2.7e-06 55.1 60 41.7
Cpa.g.sc6.112 Carica papaya HOM05D005677 ORTHO05D006966 2.7e-06 55.1 54 48.1
Pp3c1_38340 Physcomitrium patens HOM05D005677 ORTHO05D006966 3.5e-06 54.7 54 48.1
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 4.6e-06 54.3 50 52.0


User provided reference genes

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