Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 4.2e-46 188.7 133 100.0
Solyc07g007500.3 Solanum lycopersicum HOM05D013625 ORTHO05D007516 7.4e-27 124.8 104 75.0
Nitab4.5_0007621g0020 Nicotiana tabacum HOM05D013625 ORTHO05D007516 3.7e-26 122.5 133 72.2
Sopen07g003520 Solanum pennellii HOM05D013625 ORTHO05D007516 9.1e-25 117.9 104 73.1
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 2.0e-16 90.1 104 52.9
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 2.0e-16 90.1 104 54.8
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 3.5e-16 89.4 104 53.8
Nitab4.5_0000704g0140 Nicotiana tabacum HOM05D013625 ORTHO05D025947 3.6e-13 79.3 64 71.9
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 1.0e-12 77.8 101 48.5
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 1.4e-12 77.4 104 44.2
Peaxi162Scf00088g00076 Petunia axillaris HOM05D013625 ORTHO05D007516 1.8e-12 77.0 106 52.8
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 5.7e-11 72.0 93 48.4
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 2.8e-10 69.7 114 54.4
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 1.8e-09 67.0 104 42.3
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 4.5e-08 62.4 106 45.3
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 1.3e-07 60.8 106 42.5
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 1.3e-07 60.8 133 48.9
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 1.7e-07 60.5 105 42.9
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.8e-07 59.3 104 42.3
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 5.0e-07 58.9 131 48.9
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 8.5e-07 58.2 104 42.3
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 1.1e-06 57.8 105 41.0
Peaxi162Scf01694g00020 Petunia axillaris HOM05D013625 ORTHO05D007516 3.2e-06 56.2 55 63.6
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 3.2e-06 56.2 116 51.7
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 4.2e-06 55.8 104 36.5
PGSC0003DMG400030719 Solanum tuberosum HOM05D000664 ORTHO05D000491 4.2e-06 55.8 43 76.7
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 4.2e-06 55.8 85 42.4
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 5.5e-06 55.5 105 36.2
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 7.2e-06 55.1 101 37.6
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 9.4e-06 54.7 104 38.5


User provided reference genes

Program Settings