Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G466.8 Capsicum annuum HOM05D005409 ORTHO05D006456 7.4e-56 220.3 112 100.0
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 4.1e-30 134.8 174 47.1
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 2.0e-29 132.5 174 46.6
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 7.7e-29 130.6 174 46.0
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 9.4e-27 123.6 174 44.3
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 9.4e-27 123.6 173 44.5
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 2.7e-26 122.1 173 44.5
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 7.2e-11 70.9 106 39.6
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 1.2e-10 70.1 130 35.4
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.1e-10 69.3 57 59.6
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 3.6e-10 68.6 56 55.4
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 4.7e-10 68.2 56 57.1
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.2e-08 63.5 124 30.6
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.2e-08 63.5 109 37.6
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 1.2e-08 63.5 111 35.1
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 1.5e-08 63.2 98 38.8
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 2.6e-08 62.4 81 42.0
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 3.4e-08 62.0 115 33.9
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 3.4e-08 62.0 97 39.2
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 5.7e-08 61.2 65 47.7
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 7.5e-08 60.8 57 47.4
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 7.5e-08 60.8 60 50.0
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 9.8e-08 60.5 64 45.3
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 1.7e-07 59.7 97 38.1
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 2.2e-07 59.3 78 41.0
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 3.7e-07 58.5 99 35.4
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 3.7e-07 58.5 115 34.8
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 3.7e-07 58.5 64 45.3
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 6.3e-07 57.8 110 35.5
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 6.3e-07 57.8 115 34.8
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 6.3e-07 57.8 59 50.8
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 6.3e-07 57.8 83 39.8
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 8.3e-07 57.4 59 49.2
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 8.3e-07 57.4 94 37.2
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 1.1e-06 57.0 62 46.8
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 1.1e-06 57.0 100 35.0
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.1e-06 57.0 60 48.3
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.8e-06 56.2 52 50.0
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 1.8e-06 56.2 76 46.1
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 1.8e-06 56.2 76 46.1
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.8e-06 56.2 107 32.7
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 1.8e-06 56.2 57 54.4
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 4.1e-06 55.1 104 35.6
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 4.1e-06 55.1 73 46.6
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 4.1e-06 55.1 94 37.2
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 4.1e-06 55.1 111 32.4
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 5.4e-06 54.7 60 48.3
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 5.4e-06 54.7 59 49.2
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 7.0e-06 54.3 50 50.0
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 7.0e-06 54.3 117 33.3
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 9.1e-06 53.9 104 35.6
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 9.1e-06 53.9 70 42.9


User provided reference genes

Program Settings