Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G465.5 Capsicum annuum HOM05D005256 ORTHO05D006491 1.9e-90 336.3 226 100.0
Sopen10g001120 Solanum pennellii HOM05D005256 ORTHO05D006491 3.9e-64 248.8 177 78.5
Peaxi162Scf00888g00114 Petunia axillaris HOM05D005256 ORTHO05D006491 1.5e-60 236.9 145 86.9
PGSC0003DMG400011293 Solanum tuberosum HOM05D005256 ORTHO05D006491 2.5e-58 229.6 174 75.3
Solyc10g005100.3 Solanum lycopersicum HOM05D005256 ORTHO05D006491 3.5e-57 225.7 162 77.2
Nitab4.5_0004778g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 5.7e-55 218.4 146 80.8
CSS0021462 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 1.5e-52 210.3 135 80.0
Dinv07938 Davidia involucrata HOM05D005256 ORTHO05D006491 1.0e-51 207.6 135 80.0
Dinv18415 Davidia involucrata HOM05D005256 ORTHO05D006491 1.0e-51 207.6 135 80.0
Oeu005126.1 Olea europaea HOM05D005256 ORTHO05D006491 2.2e-51 206.5 175 66.9
Nn1g09867 Nelumbo nucifera HOM05D005256 ORTHO05D006491 1.9e-50 203.4 135 77.8
Sabra03G0114000 Salix brachista HOM05D005256 ORTHO05D006491 3.2e-50 202.6 164 68.3
Atru.chr10.203 Acer truncatum HOM05D005256 ORTHO05D006491 4.2e-50 202.2 175 64.6
vmacro03574 Vaccinium macrocarpon HOM05D005256 ORTHO05D006491 4.2e-50 202.2 135 77.0
Potri.003G157100 Populus trichocarpa HOM05D005256 ORTHO05D006491 5.5e-50 201.8 164 68.3
CSS0003949 Camellia sinensis var. sinensis HOM05D005256 ORTHO05D006491 7.2e-50 201.4 134 76.9
Sabra01G0052200 Salix brachista HOM05D005256 ORTHO05D006491 1.6e-49 200.3 145 74.5
Rhsim13G0136300 Rhododendron simsii HOM05D005256 ORTHO05D006491 2.1e-49 199.9 162 67.9
Glyma.09G047200 Glycine max HOM05D005256 ORTHO05D006491 4.6e-49 198.7 136 75.7
Glyma.15G154700 Glycine max HOM05D005256 ORTHO05D006491 1.0e-48 197.6 136 75.0
QL11p010746 Quercus lobata HOM05D005256 ORTHO05D006491 5.1e-48 195.3 179 62.6
EL10Ac7g17298 Beta vulgaris HOM05D005256 ORTHO05D006491 6.7e-48 194.9 174 64.4
Manes.16G060225 Manihot esculenta HOM05D005256 ORTHO05D006491 6.7e-48 194.9 132 73.5
GSVIVG01001340001 Vitis vinifera HOM05D005256 ORTHO05D006491 8.7e-48 194.5 137 74.5
Haze_05185 Corylus avellana HOM05D005256 ORTHO05D006491 1.1e-47 194.1 135 74.8
CiPaw.09G140800 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.9e-47 193.4 135 71.9
Lalb_Chr18g0051841 Lupinus albus HOM05D005256 ORTHO05D006491 1.9e-47 193.4 175 63.4
TAR626G1126 Trochodendron aralioides HOM05D005256 ORTHO05D006491 2.5e-47 193.0 132 75.8
Oeu052922.1 Olea europaea HOM05D005256 ORTHO05D006491 4.3e-47 192.2 177 61.0
Lj6g0014214 Lotus japonicus HOM05D005256 ORTHO05D006491 5.7e-47 191.8 135 73.3
Medtr2g437530 Medicago truncatula HOM05D005256 ORTHO05D006491 5.7e-47 191.8 174 64.4
TWI63G0333 Tripterygium wilfordii HOM05D005256 ORTHO05D006491 5.7e-47 191.8 167 64.1
Potri.001G073900 Populus trichocarpa HOM05D005256 ORTHO05D006491 7.4e-47 191.4 167 65.9
Hma1.2p1_0082F.1_g042560 Hydrangea macrophylla HOM05D005256 ORTHO05D006491 1.6e-46 190.3 174 62.1
arahy.Tifrunner.gnm1.ann1.98CSRD Arachis hypogaea HOM05D005256 ORTHO05D006491 2.2e-46 189.9 135 70.4
arahy.Tifrunner.gnm1.ann1.QDE700 Arachis hypogaea HOM05D005256 ORTHO05D006491 2.2e-46 189.9 135 70.4
Eucgr.D00001 Eucalyptus grandis HOM05D005256 ORTHO05D006491 2.8e-46 189.5 170 64.1
Ciclev10016618m.g Citrus clementina HOM05D005256 ORTHO05D006491 8.2e-46 188.0 137 73.0
Prupe.4G121100 Prunus persica HOM05D005256 ORTHO05D006491 8.2e-46 188.0 135 73.3
Peaxi162Scf01310g00311 Petunia axillaris HOM05D005256 ORTHO05D006491 1.1e-45 187.6 137 73.0
CARHR227090 Cardamine hirsuta HOM05D005256 ORTHO05D006491 1.4e-45 187.2 175 61.7
AT4G20260 Arabidopsis thaliana HOM05D005256 ORTHO05D006491 1.8e-45 186.8 176 60.8
Aa31LG6G2690 Aethionema arabicum HOM05D005256 ORTHO05D006491 2.4e-45 186.4 171 57.3
AL7G33640 Arabidopsis lyrata HOM05D005256 ORTHO05D006491 2.4e-45 186.4 137 69.3
MD05G1242300 Malus domestica HOM05D005256 ORTHO05D006491 3.1e-45 186.0 135 72.6
SalBow7G1744 Salvia bowleyana HOM05D005256 ORTHO05D006491 3.1e-45 186.0 175 61.1
TAR624G1249 Trochodendron aralioides HOM05D005256 ORTHO05D006491 3.1e-45 186.0 174 60.9
Ca_02405_v3 Cicer arietinum L. HOM05D005256 ORTHO05D006491 5.3e-45 185.3 175 61.1
THA.LOC104812925 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 5.3e-45 185.3 137 71.5
TPR.G31382 Trifolium pratense HOM05D005256 ORTHO05D006491 5.3e-45 185.3 174 59.8
Psat1g152160 Pisum sativum HOM05D005256 ORTHO05D006491 9.0e-45 184.5 173 61.3
AUR62040985 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.2e-44 184.1 171 60.2
MD10G1224100 Malus domestica HOM05D005256 ORTHO05D006491 1.5e-44 183.7 164 62.8
THA.LOC104811953 Tarenaya hassleriana HOM05D005256 ORTHO05D006491 1.5e-44 183.7 184 59.8
Lsat_1_v5_gn_2_59820 Lactuca sativa HOM05D005256 ORTHO05D006491 2.0e-44 183.3 169 61.5
RcHm_v2.0_Chr5g0022081 Rosa chinensis HOM05D005256 ORTHO05D006491 2.0e-44 183.3 155 66.5
Phvul.009G245700 Phaseolus vulgaris HOM05D005256 ORTHO05D006491 2.6e-44 183.0 174 59.2
MBI07_g44405_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 3.4e-44 182.6 170 61.2
Lalb_Chr15g0083621 Lupinus albus HOM05D005256 ORTHO05D006491 5.9e-44 181.8 135 69.6
Hund20133 Selenicereus undatus HOM05D005256 ORTHO05D006491 5.9e-44 181.8 177 58.2
Cpa.g.sc30.65 Carica papaya HOM05D005256 ORTHO05D006491 7.7e-44 181.4 173 59.0
Cc09_g04590 Coffea canephora HOM05D005256 ORTHO05D006491 7.7e-44 181.4 172 61.0
Sc17g0004300 Simmondsia chinensis HOM05D005256 ORTHO05D006491 7.7e-44 181.4 157 59.2
CANSAT35G0328 Cannabis sativa HOM05D005256 ORTHO05D006491 2.9e-43 179.5 137 67.9
Thhalv10026094m.g Eutrema salsugineum HOM05D005256 ORTHO05D006491 2.9e-43 179.5 152 63.8
MSTRG.14820 Avicennia marina HOM05D005256 ORTHO05D006491 5.0e-43 178.7 144 66.7
Carub.0007s2091 Capsella rubella HOM05D005256 ORTHO05D006491 8.5e-43 177.9 137 65.7
Ah.15g091820 Amaranthus hybridus HOM05D005256 ORTHO05D006491 1.4e-42 177.2 166 60.8
A01p11960 Brassica napus HOM05D005256 ORTHO05D006491 1.4e-42 177.2 137 67.2
BraA01t01138Z Brassica rapa HOM05D005256 ORTHO05D006491 1.4e-42 177.2 137 67.2
ECA238G2220 Erigeron canadensis HOM05D005256 ORTHO05D006491 2.5e-42 176.4 132 71.2
FAN11G1371 Fragaria x ananassa HOM05D005256 ORTHO05D006491 2.5e-42 176.4 158 60.8
HanXRQChr14g0439031 Helianthus annuus HOM05D005256 ORTHO05D006491 3.2e-42 176.0 136 68.4
COL.COLO4_25022 Corchorus olitorius HOM05D005256 ORTHO05D006491 4.2e-42 175.6 132 68.2
Migut.L00006 Erythranthe guttata HOM05D005256 ORTHO05D006491 4.2e-42 175.6 131 69.5
HanXRQChr15g0487481 Helianthus annuus HOM05D005256 ORTHO05D006491 4.2e-42 175.6 131 68.7
Lsat_1_v5_gn_8_107621 Lactuca sativa HOM05D005256 ORTHO05D006491 4.2e-42 175.6 131 71.0
ATR0737G015 Amborella trichopoda HOM05D005256 ORTHO05D006491 5.5e-42 175.3 174 61.5
BcaC09g51326 Brassica carinata HOM05D005256 ORTHO05D006491 5.5e-42 175.3 181 58.0
C01p14230 Brassica napus HOM05D005256 ORTHO05D006491 5.5e-42 175.3 181 58.0
C07p50830 Brassica napus HOM05D005256 ORTHO05D006491 5.5e-42 175.3 172 58.1
BolC1t01388H Brassica oleracea HOM05D005256 ORTHO05D006491 5.5e-42 175.3 181 58.0
BolC7t45581H Brassica oleracea HOM05D005256 ORTHO05D006491 5.5e-42 175.3 137 65.7
FvH4_3g13370 Fragaria vesca HOM05D005256 ORTHO05D006491 5.5e-42 175.3 155 61.3
FAN21G0853 Fragaria x ananassa HOM05D005256 ORTHO05D006491 5.5e-42 175.3 158 60.8
VMungo1309G1298 Vigna mungo HOM05D005256 ORTHO05D006491 5.5e-42 175.3 132 70.5
A03p52380 Brassica napus HOM05D005256 ORTHO05D006491 1.2e-41 174.1 137 65.0
CiPaw.10G108500 Carya illinoinensis HOM05D005256 ORTHO05D006491 1.2e-41 174.1 139 67.6
FAN16G0515 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.2e-41 174.1 155 61.3
FAN25G1093 Fragaria x ananassa HOM05D005256 ORTHO05D006491 1.2e-41 174.1 155 61.3
BraA03t14315Z Brassica rapa HOM05D005256 ORTHO05D006491 1.6e-41 173.7 137 65.0
BcaNung03497 Brassica carinata HOM05D005256 ORTHO05D006491 2.7e-41 172.9 137 65.0
Sp7g18620 Schrenkiella parvula HOM05D005256 ORTHO05D006491 3.6e-41 172.6 137 65.0
BcaC06g30648 Brassica carinata HOM05D005256 ORTHO05D006491 1.4e-40 170.6 137 62.8
HPP92_008810 Vanilla planifolia HOM05D005256 ORTHO05D006491 1.4e-40 170.6 130 70.0
ECA232G1901 Erigeron canadensis HOM05D005256 ORTHO05D006491 1.1e-39 167.5 131 67.9
MBI06_g04184_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.1e-39 167.5 136 66.2
CDE02G1470 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 3.3e-39 166.0 137 62.0
PSO675G8904 Papaver somniferum HOM05D005256 ORTHO05D006491 5.7e-39 165.2 154 59.7
PSO541G2657 Papaver somniferum HOM05D005256 ORTHO05D006491 1.3e-38 164.1 154 59.1
Nitab4.5_0012748g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.7e-38 163.7 103 83.5
Thecc.02G000700 Theobroma cacao HOM05D005256 ORTHO05D006491 2.8e-38 162.9 126 65.9
FAN25G0981 Fragaria x ananassa HOM05D005256 ORTHO05D006491 6.3e-38 161.8 155 59.4
CDE10G0480 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 8.2e-38 161.4 136 62.5
CDE10G1097 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 1.4e-37 160.6 137 64.2
Nitab4.5_0000217g0040 Nicotiana tabacum HOM05D005256 ORTHO05D006491 3.1e-37 159.5 198 54.5
BcaNung03716 Brassica carinata HOM05D005256 ORTHO05D006491 1.2e-36 157.5 151 60.3
Nitab4.5_0001253g0020 Nicotiana tabacum HOM05D005256 ORTHO05D006491 1.5e-36 157.1 175 62.9
Aa31LG9G8540 Aethionema arabicum HOM05D005256 ORTHO05D006491 1.7e-35 153.7 174 52.3
HanXRQChr09g0257711 Helianthus annuus HOM05D005256 ORTHO05D006491 3.8e-35 152.5 131 61.8
Os02g0285300 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 5.0e-35 152.1 138 60.9
AUR62042105 Chenopodium quinoa HOM05D005256 ORTHO05D006491 1.9e-34 150.2 168 54.8
CDE09G1225 Ceratophyllum demersum HOM05D005256 ORTHO05D006491 2.3e-32 143.3 173 50.3
C07p27480 Brassica napus HOM05D005256 ORTHO05D006491 1.5e-31 140.6 171 49.1
A09p21180 Brassica napus HOM05D005256 ORTHO05D006491 3.3e-31 139.4 139 53.2
BraA09t37724Z Brassica rapa HOM05D005256 ORTHO05D006491 3.3e-31 139.4 139 53.2
BolC7t43278H Brassica oleracea HOM05D005256 ORTHO05D006491 7.4e-31 138.3 171 48.5
BcaC06g34533 Brassica carinata HOM05D005256 ORTHO05D006491 9.7e-31 137.9 175 49.1
A06p47070 Brassica napus HOM05D005256 ORTHO05D006491 9.7e-31 137.9 178 50.6
BraA06t27579Z Brassica rapa HOM05D005256 ORTHO05D006491 9.7e-31 137.9 178 50.6
BcaB07g30517 Brassica carinata HOM05D005256 ORTHO05D006491 6.3e-30 135.2 172 48.3
BcaC04g21824 Brassica carinata HOM05D005256 ORTHO05D006491 1.1e-29 134.4 180 45.6
C09p27010 Brassica napus HOM05D005256 ORTHO05D006491 1.1e-29 134.4 180 45.6
BolC9t55584H Brassica oleracea HOM05D005256 ORTHO05D006491 1.1e-29 134.4 180 45.6
DCAR_003732 Daucus carota HOM05D005256 ORTHO05D006491 3.1e-29 132.9 131 53.4
BcaB07g30940 Brassica carinata HOM05D005256 ORTHO05D006491 4.1e-29 132.5 139 51.1
Sp2g09430 Schrenkiella parvula HOM05D005256 ORTHO05D006491 1.3e-27 127.5 139 51.1
MBI06_g26562_MAGBIO Magnolia biondii HOM05D005256 ORTHO05D006491 1.1e-26 124.4 100 66.0
Zm00001eb236850 Zea mays HOM05D005256 ORTHO05D006491 2.1e-25 120.2 115 58.3
Zm00001eb119130 Zea mays HOM05D005256 ORTHO05D006491 1.8e-24 117.1 134 53.7
C02p45090 Brassica napus HOM05D005256 ORTHO05D006491 6.7e-24 115.2 172 45.3
BolC2t10548H Brassica oleracea HOM05D005256 ORTHO05D006491 6.7e-24 115.2 172 45.3
Zm00001eb339340 Zea mays HOM05D005256 ORTHO05D006491 8.8e-24 114.8 169 49.7
Os01g0233000 Oryza sativa ssp. japonica HOM05D005256 ORTHO05D006491 1.3e-22 110.9 166 45.2
Lsat_1_v5_gn_9_9820 Lactuca sativa HOM05D005256 ORTHO05D006491 5.9e-20 102.1 100 59.0
Lalb_Chr20g0114421 Lupinus albus HOM05D005256 ORTHO05D006491 7.7e-20 101.7 112 56.2
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 1.8e-16 90.5 67 73.1
Mapoly0087s0006 Marchantia polymorpha HOM05D005256 ORTHO05D006491 8.8e-08 61.6 186 32.3
Zm00001eb381370 Zea mays HOM05D005256 ORTHO05D006491 2.0e-07 60.5 60 56.7
FvH4_7g19390 Fragaria vesca HOM05D036880 ORTHO05D006491 1.7e-06 57.4 55 54.5


User provided reference genes

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