Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G463.6 Capsicum annuum HOM05D000613 ORTHO05D000446 8.3e-41 169.9 81 100.0
CAN.G644.22 Capsicum annuum HOM05D000613 ORTHO05D000446 1.1e-13 79.7 49 73.5
Nitab4.5_0011810g0010 Nicotiana tabacum HOM05D000613 ORTHO05D000446 1.9e-13 79.0 135 35.6
Solyc11g066960.3 Solanum lycopersicum HOM05D000613 ORTHO05D000446 4.3e-13 77.8 49 71.4
PGSC0003DMG400026541 Solanum tuberosum HOM05D000613 ORTHO05D000446 4.3e-13 77.8 49 71.4
Peaxi162Scf00002g05433 Petunia axillaris HOM05D000613 ORTHO05D000446 5.6e-13 77.4 135 35.6
Sopen11g026680 Solanum pennellii HOM05D000613 ORTHO05D000446 2.1e-12 75.5 49 69.4
Nitab4.5_0006089g0050 Nicotiana tabacum HOM05D000613 ORTHO05D000446 5.2e-11 70.9 49 61.2
SalBow6G3775 Salvia bowleyana HOM05D000613 ORTHO05D000446 7.5e-10 67.0 128 34.4
MD03G1136100 Malus domestica HOM05D000613 ORTHO05D000446 6.4e-09 63.9 135 31.1
SalBow7G2121 Salvia bowleyana HOM05D000613 ORTHO05D000446 6.4e-09 63.9 136 32.4
CSS0044985 Camellia sinensis var. sinensis HOM05D000613 ORTHO05D000446 8.3e-09 63.5 134 32.1
Dinv12513 Davidia involucrata HOM05D000613 ORTHO05D000446 8.3e-09 63.5 137 31.4
Ca_19380_v3 Cicer arietinum L. HOM05D000613 ORTHO05D000446 1.9e-08 62.4 47 55.3
Phvul.011G091500 Phaseolus vulgaris HOM05D000613 ORTHO05D000446 1.9e-08 62.4 135 32.6
Hma1.2p1_0695F.1_g204450 Hydrangea macrophylla HOM05D000613 ORTHO05D000446 2.4e-08 62.0 135 31.1
Migut.D02360 Erythranthe guttata HOM05D000613 ORTHO05D000446 4.1e-08 61.2 137 32.1
PSO443G0071 Papaver somniferum HOM05D000613 ORTHO05D000446 7.1e-08 60.5 135 31.9
RcHm_v2.0_Chr5g0055011 Rosa chinensis HOM05D000613 ORTHO05D000446 9.2e-08 60.1 135 30.4
TWI31G0082 Tripterygium wilfordii HOM05D000613 ORTHO05D000446 9.2e-08 60.1 127 32.3
CiPaw.13G140000 Carya illinoinensis HOM05D000613 ORTHO05D000446 1.2e-07 59.7 49 51.0
arahy.Tifrunner.gnm1.ann1.013JYW Arachis hypogaea HOM05D000613 ORTHO05D000446 1.6e-07 59.3 41 61.0
Glyma.11G188100 Glycine max HOM05D000613 ORTHO05D000446 1.6e-07 59.3 132 31.8
Lj2A992T23 Lonicera japonica HOM05D000613 ORTHO05D000446 1.6e-07 59.3 40 62.5
Nn7g38261 Nelumbo nucifera HOM05D000613 ORTHO05D000446 1.6e-07 59.3 49 53.1
PSO384G3251 Papaver somniferum HOM05D000613 ORTHO05D000446 1.6e-07 59.3 40 60.0
SGA_v2.0_scaffold27G11624 Striga asiatica HOM05D000613 ORTHO05D000446 1.6e-07 59.3 111 34.2
Psat7g189920 Pisum sativum HOM05D000613 ORTHO05D000446 2.1e-07 58.9 46 58.7
CANSAT54G1868 Cannabis sativa HOM05D000613 ORTHO05D000446 2.7e-07 58.5 49 53.1
FvH4_3g29650 Fragaria vesca HOM05D000613 ORTHO05D000446 3.5e-07 58.2 135 28.9
Oeu058280.1 Olea europaea HOM05D000613 ORTHO05D000446 6.0e-07 57.4 137 29.2
Gohir.D09G093500 Gossypium hirsutum HOM05D000613 ORTHO05D000446 7.8e-07 57.0 46 54.3
Lj3g0004331 Lotus japonicus HOM05D000613 ORTHO05D000446 7.8e-07 57.0 40 60.0
HanXRQChr11g0345911 Helianthus annuus HOM05D000613 ORTHO05D000446 1.0e-06 56.6 49 49.0
MBI17_g19797_MAGBIO Magnolia biondii HOM05D000613 ORTHO05D000446 1.0e-06 56.6 41 61.0
vmacro14361 Vaccinium macrocarpon HOM05D000613 ORTHO05D000446 1.0e-06 56.6 41 58.5
Duzib150G1136 Durio zibethinus HOM05D000613 ORTHO05D000446 1.3e-06 56.2 46 54.3
FAN16G0170 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.3e-06 56.2 49 49.0
FAN25G2504 Fragaria x ananassa HOM05D000613 ORTHO05D000446 1.3e-06 56.2 133 28.6
Prupe.6G120800 Prunus persica HOM05D000613 ORTHO05D000446 1.3e-06 56.2 49 49.0
Dinv29436 Davidia involucrata HOM05D000613 ORTHO05D000446 1.7e-06 55.8 40 60.0
Lsat_1_v5_gn_1_62120 Lactuca sativa HOM05D000613 ORTHO05D000446 1.7e-06 55.8 49 46.9
QL01p013431 Quercus lobata HOM05D000613 ORTHO05D000446 1.7e-06 55.8 40 57.5
Cc01_g09670 Coffea canephora HOM05D000613 ORTHO05D000446 2.3e-06 55.5 49 51.0
Manes.11G158700 Manihot esculenta HOM05D000613 ORTHO05D000446 2.3e-06 55.5 46 52.2
TAR633G1306 Trochodendron aralioides HOM05D000613 ORTHO05D000446 2.3e-06 55.5 135 28.1
Gorai.006G110100 Gossypium raimondii HOM05D000613 ORTHO05D000446 3.0e-06 55.1 46 52.2
Lalb_Chr03g0027961 Lupinus albus HOM05D000613 ORTHO05D000446 3.0e-06 55.1 135 28.9
Gohir.A09G093800 Gossypium hirsutum HOM05D000613 ORTHO05D000446 3.9e-06 54.7 46 52.2
FAN11G3077 Fragaria x ananassa HOM05D000613 ORTHO05D000446 5.1e-06 54.3 133 27.8
COL.COLO4_19960 Corchorus olitorius HOM05D000613 ORTHO05D000446 6.6e-06 53.9 40 55.0
PGR119G0205 Punica granatum HOM05D000613 ORTHO05D000446 6.6e-06 53.9 40 57.5
Aqoxy2G01362 Aquilegia oxysepala HOM05D000613 ORTHO05D000446 8.6e-06 53.5 135 29.6
Eucgr.J00445 Eucalyptus grandis HOM05D000613 ORTHO05D000446 8.6e-06 53.5 40 52.5


User provided reference genes

Program Settings