Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G460.4 Capsicum annuum HOM05D003900 ORTHO05D005009 2.8e-76 288.5 143 100.0
CAN.G874.71 Capsicum annuum HOM05D003900 ORTHO05D005009 1.6e-39 166.4 93 87.1
CAN.G853.45 Capsicum annuum HOM05D003900 ORTHO05D005009 1.4e-38 163.3 95 83.2
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 1.2e-37 160.2 101 78.2
CAN.G1417.4 Capsicum annuum HOM05D003900 ORTHO05D005009 1.4e-35 153.3 101 75.2
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 2.9e-33 145.6 101 71.3
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 5.0e-33 144.8 101 70.3
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 2.5e-32 142.5 101 66.3
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 1.2e-31 140.2 101 65.3
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 1.2e-31 140.2 101 70.3
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 3.2e-27 125.6 94 66.0
CAN.G430.2 Capsicum annuum HOM05D003900 ORTHO05D005009 8.0e-23 110.9 64 85.9
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 9.8e-21 104.0 101 50.5
CAN.G1005.1 Capsicum annuum HOM05D003900 ORTHO05D005009 4.9e-20 101.7 52 92.3
CAN.G609.3 Capsicum annuum HOM05D003900 ORTHO05D005009 3.5e-18 95.5 144 45.8
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 3.9e-17 92.0 98 48.0
THA.LOC104817316 Tarenaya hassleriana HOM05D003900 ORTHO05D005009 1.1e-16 90.5 101 49.5
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 2.5e-16 89.4 101 45.5
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 3.3e-16 89.0 98 46.9
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 3.3e-16 89.0 98 45.9
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 1.6e-15 86.7 101 44.6
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 2.8e-15 85.9 94 44.7
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 2.8e-15 85.9 94 44.7
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 3.6e-15 85.5 101 45.5
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 4.7e-15 85.1 101 42.6
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.2e-15 84.7 101 44.6
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.2e-15 84.7 101 44.6
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 8.1e-15 84.3 94 48.9
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 8.1e-15 84.3 94 42.6
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 1.1e-14 84.0 101 44.6
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 4.0e-14 82.0 101 43.6
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 5.2e-14 81.6 94 42.6
Ciclev10019067m.g Citrus clementina HOM05D003900 ORTHO05D005009 8.9e-14 80.9 108 41.7
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 1.2e-13 80.5 95 45.3
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.4e-13 79.0 93 41.9
CAN.G1005.2 Capsicum annuum HOM05D003900 ORTHO05D005009 4.4e-13 78.6 46 82.6
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 4.4e-13 78.6 98 42.9
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 7.5e-13 77.8 93 44.1
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 7.5e-13 77.8 94 41.5
Thhalv10022571m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 1.7e-12 76.6 101 40.6
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 1.7e-12 76.6 94 41.5
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 2.2e-12 76.3 94 39.4
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 2.9e-12 75.9 101 40.6
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 2.9e-12 75.9 94 40.4
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 4.9e-12 75.1 101 42.6
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 4.9e-12 75.1 94 41.5
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 8.3e-12 74.3 101 42.6
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 8.3e-12 74.3 96 43.8
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.4e-11 73.6 93 39.8
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 1.4e-11 73.6 101 40.6
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 1.9e-11 73.2 101 41.6
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 3.2e-11 72.4 101 41.6
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 3.2e-11 72.4 93 40.9
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 3.2e-11 72.4 102 37.3
Thhalv10001319m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 3.2e-11 72.4 102 41.2
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 4.1e-11 72.0 101 41.6
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 4.1e-11 72.0 116 37.9
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 5.4e-11 71.6 101 40.6
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 5.4e-11 71.6 93 37.6
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 7.1e-11 71.2 101 40.6
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 7.1e-11 71.2 101 38.6
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 9.2e-11 70.9 94 41.5
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 9.2e-11 70.9 101 37.6
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 1.6e-10 70.1 93 35.5
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 2.7e-10 69.3 101 37.6
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 2.7e-10 69.3 93 37.6
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 3.5e-10 68.9 101 38.6
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 4.6e-10 68.6 102 38.2
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 4.6e-10 68.6 101 38.6
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea HOM05D003900 ORTHO05D005009 7.8e-10 67.8 97 39.2
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 7.8e-10 67.8 94 38.3
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.0e-09 67.4 94 37.2
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 1.7e-09 66.6 93 37.6
CARHR141390 Cardamine hirsuta HOM05D003900 ORTHO05D005009 3.0e-09 65.9 107 34.6
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 3.0e-09 65.9 94 36.2
Sp4g28170 Schrenkiella parvula HOM05D003900 ORTHO05D005009 3.0e-09 65.9 107 35.5
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 3.0e-09 65.9 94 35.1
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 3.9e-09 65.5 93 34.4
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 5.1e-09 65.1 98 33.7
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 5.1e-09 65.1 94 36.2
FAN06G2614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 5.1e-09 65.1 94 36.2
FAN06G4981 Fragaria x ananassa HOM05D003900 ORTHO05D005009 5.1e-09 65.1 94 36.2
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 5.1e-09 65.1 94 39.4
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 6.6e-09 64.7 93 37.6
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 6.6e-09 64.7 101 36.6
Aa31LG1G27520 Aethionema arabicum HOM05D003900 ORTHO05D005009 8.6e-09 64.3 94 39.4
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 8.6e-09 64.3 94 35.1
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 8.6e-09 64.3 94 36.2
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 8.6e-09 64.3 94 38.3
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea HOM05D003900 ORTHO05D005009 1.1e-08 63.9 97 37.1
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 2.5e-08 62.8 102 36.3
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 4.3e-08 62.0 94 35.1
Ca_17228_v3 Cicer arietinum L. HOM05D000113 ORTHO05D005009 5.6e-08 61.6 94 36.2
Medtr8g098755 Medicago truncatula HOM05D003900 ORTHO05D005009 5.6e-08 61.6 115 33.0
VMungo0251G0997 Vigna mungo HOM05D003900 ORTHO05D005009 5.6e-08 61.6 93 33.3
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 7.3e-08 61.2 93 36.6
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 1.2e-07 60.5 115 33.0
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.6e-07 60.1 94 35.1
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.6e-07 60.1 94 35.1
AUR62004412 Chenopodium quinoa HOM05D003900 ORTHO05D005009 3.6e-07 58.9 98 34.7
RcHm_v2.0_Chr3g0468501 Rosa chinensis HOM05D003900 ORTHO05D005009 4.7e-07 58.5 88 33.0
Aqoxy7G01955 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 8.1e-07 57.8 98 34.7
MELO3C029134.2 Cucumis melo HOM05D003900 ORTHO05D005009 1.8e-06 56.6 98 31.6
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 3.1e-06 55.8 94 33.0


User provided reference genes

Program Settings