Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G46.47 Capsicum annuum HOM05D000574 ORTHO05D022156 3.9e-41 171.0 86 100.0
CAN.G629.6 Capsicum annuum HOM05D001790 ORTHO05D022156 1.7e-31 139.0 85 81.2
CAN.G1245.16 Capsicum annuum HOM05D001673 ORTHO05D022156 1.1e-30 136.3 85 83.5
CAN.G80.1 Capsicum annuum HOM05D001673 ORTHO05D022156 1.6e-29 132.5 85 80.0
CAN.G584.38 Capsicum annuum HOM05D000574 ORTHO05D003995 2.0e-29 132.1 81 85.2
CAN.G22.15 Capsicum annuum HOM05D001790 ORTHO05D022156 2.2e-28 128.6 85 78.8
CAN.G124.14 Capsicum annuum HOM05D004384 ORTHO05D022156 2.9e-28 128.3 80 85.0
CAN.G37.9 Capsicum annuum HOM05D001673 ORTHO05D013418 2.9e-28 128.3 80 85.0
Sopen07g002620 Solanum pennellii HOM05D000574 ORTHO05D003995 2.3e-25 118.6 82 75.6
PGSC0003DMG400027472 Solanum tuberosum HOM05D000574 ORTHO05D003995 2.3e-25 118.6 82 76.8
Solyc07g006540.3 Solanum lycopersicum HOM05D000574 ORTHO05D003995 2.2e-23 112.1 82 72.0
Peaxi162Scf00457g00017 Petunia axillaris HOM05D000574 ORTHO05D003995 2.4e-22 108.6 81 71.6
Nitab4.5_0001212g0020 Nicotiana tabacum HOM05D000574 ORTHO05D003995 1.2e-21 106.3 83 71.1
CAN.G628.2 Capsicum annuum HOM05D001673 ORTHO05D013418 5.9e-21 104.0 61 85.2
Nitab4.5_0000244g0070 Nicotiana tabacum HOM05D000574 ORTHO05D003995 1.7e-20 102.4 85 67.1
Peaxi162Scf00297g00107 Petunia axillaris HOM05D000574 ORTHO05D003995 2.1e-18 95.5 81 63.0
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 3.6e-18 94.7 71 70.4
TAR383G0803 Trochodendron aralioides HOM05D000574 ORTHO05D003995 3.5e-13 78.2 82 56.1
TAR626G0730 Trochodendron aralioides HOM05D000574 ORTHO05D003995 2.9e-12 75.1 82 54.9
Ciclev10007320m.g Citrus clementina HOM05D000574 ORTHO05D003995 8.6e-12 73.6 82 53.7
QL02p096073 Quercus lobata HOM05D000574 ORTHO05D003995 8.6e-12 73.6 82 52.4
Cfa013537 Carpinus fangiana HOM05D000574 ORTHO05D003995 1.9e-11 72.4 81 51.9
GSVIVG01032247001 Vitis vinifera HOM05D000574 ORTHO05D003995 7.2e-11 70.5 84 47.6
Hma1.2p1_0921F.1_g236690 Hydrangea macrophylla HOM05D000574 ORTHO05D003995 9.5e-11 70.1 81 46.9
Actinidia04113 Actinidia chinensis HOM05D000574 ORTHO05D003995 1.6e-10 69.3 76 52.6
Actinidia25169 Actinidia chinensis HOM05D000574 ORTHO05D003995 1.6e-10 69.3 82 48.8
Cc06_g13800 Coffea canephora HOM05D000574 ORTHO05D003995 1.6e-10 69.3 81 46.9
Manes.06G026400 Manihot esculenta HOM05D000574 ORTHO05D003995 1.6e-10 69.3 82 47.6
vmacro06037 Vaccinium macrocarpon HOM05D000574 ORTHO05D003995 1.6e-10 69.3 82 47.6
Thecc.09G163400 Theobroma cacao HOM05D000574 ORTHO05D003995 3.6e-10 68.2 85 47.1
MSTRG.6184 Avicennia marina HOM05D000574 ORTHO05D003995 6.1e-10 67.4 80 47.5
DCAR_014715 Daucus carota HOM05D000574 ORTHO05D003995 8.0e-10 67.0 82 43.9
Potri.006G175200 Populus trichocarpa HOM05D000574 ORTHO05D003995 8.0e-10 67.0 83 45.8
Actinidia24023 Actinidia chinensis HOM05D000574 ORTHO05D003995 1.0e-09 66.6 82 48.8
CSS0007446 Camellia sinensis var. sinensis HOM05D000574 ORTHO05D003995 1.0e-09 66.6 81 49.4
Haze_22152 Corylus avellana HOM05D000574 ORTHO05D003995 1.0e-09 66.6 81 48.1
Nn8g40286 Nelumbo nucifera HOM05D000574 ORTHO05D003995 1.0e-09 66.6 85 50.6
Potri.018G097300 Populus trichocarpa HOM05D000574 ORTHO05D003995 1.0e-09 66.6 81 46.9
Sabra06G0134000 Salix brachista HOM05D000574 ORTHO05D003995 1.0e-09 66.6 83 44.6
Atru.chr7.551 Acer truncatum HOM05D000574 ORTHO05D003995 1.8e-09 65.9 81 49.4
Sabra18G0084400 Salix brachista HOM05D000574 ORTHO05D003995 2.3e-09 65.5 81 44.4
EL10Ac8g18253 Beta vulgaris HOM05D000574 ORTHO05D003995 4.0e-09 64.7 75 49.3
COL.COLO4_16072 Corchorus olitorius HOM05D000574 ORTHO05D003995 4.0e-09 64.7 83 47.0
Rhsim03G0262100 Rhododendron simsii HOM05D000574 ORTHO05D003995 5.2e-09 64.3 82 43.9
TWI34G1191 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 1.5e-08 62.8 85 48.2
Prupe.1G095200 Prunus persica HOM05D000574 ORTHO05D003995 2.6e-08 62.0 75 48.0
Rhsim01G0009600 Rhododendron simsii HOM05D000574 ORTHO05D003995 2.6e-08 62.0 82 46.3
AUR62040287 Chenopodium quinoa HOM05D000574 ORTHO05D003995 3.4e-08 61.6 78 46.2
Manes.14G147300 Manihot esculenta HOM05D000574 ORTHO05D003995 3.4e-08 61.6 75 46.7
MSTRG.26238 Avicennia marina HOM05D000574 ORTHO05D003995 4.4e-08 61.2 81 40.7
Actinidia38649 Actinidia chinensis HOM05D000574 ORTHO05D003995 5.7e-08 60.8 65 47.7
arahy.Tifrunner.gnm1.ann1.J9PLIE Arachis hypogaea HOM05D000574 ORTHO05D003995 7.5e-08 60.5 81 42.0
AUR62039978 Chenopodium quinoa HOM05D000574 ORTHO05D003995 7.5e-08 60.5 78 44.9
Duzib168G1018 Durio zibethinus HOM05D000574 ORTHO05D003995 9.8e-08 60.1 82 45.1
TAR625G0053 Trochodendron aralioides HOM05D000574 ORTHO05D003995 1.3e-07 59.7 82 45.1
vmacro13084 Vaccinium macrocarpon HOM05D000574 ORTHO05D003995 1.3e-07 59.7 76 48.7
arahy.Tifrunner.gnm1.ann1.9BS001 Arachis hypogaea HOM05D000574 ORTHO05D003995 1.7e-07 59.3 81 40.7
CiPaw.08G039300 Carya illinoinensis HOM05D000574 ORTHO05D003995 1.7e-07 59.3 82 45.1
Nn2g12603 Nelumbo nucifera HOM05D000574 ORTHO05D003995 2.2e-07 58.9 83 47.0
Duzib150G0718 Durio zibethinus HOM05D000574 ORTHO05D003995 2.8e-07 58.5 83 43.4
Lj9A730T53 Lonicera japonica HOM05D000574 ORTHO05D003995 2.8e-07 58.5 82 41.5
Ah.14g084050 Amaranthus hybridus HOM05D000574 ORTHO05D003995 3.7e-07 58.2 72 45.8
Sc14g0001130 Simmondsia chinensis HOM05D000574 ORTHO05D003995 3.7e-07 58.2 80 45.0
Gohir.A08G235100 Gossypium hirsutum HOM05D000574 ORTHO05D003995 4.9e-07 57.8 83 41.0
Ah.09g229620 Amaranthus hybridus HOM05D000574 ORTHO05D003995 1.1e-06 56.6 78 41.0
MSTRG.10724 Avicennia marina HOM05D000574 ORTHO05D003995 1.1e-06 56.6 80 40.0
TWI32G0801 Tripterygium wilfordii HOM05D000574 ORTHO05D003995 2.4e-06 55.5 82 43.9
ATR0580G310 Amborella trichopoda HOM05D000574 ORTHO05D003995 3.1e-06 55.1 83 45.8
Gohir.D08G255500 Gossypium hirsutum HOM05D000574 ORTHO05D003995 3.1e-06 55.1 83 38.6
Gorai.004G272800 Gossypium raimondii HOM05D000574 ORTHO05D003995 3.1e-06 55.1 83 38.6
MD13G1261900 Malus domestica HOM05D000574 ORTHO05D003995 4.1e-06 54.7 75 41.3
Gohir.A05G006400 Gossypium hirsutum HOM05D000574 ORTHO05D003995 7.0e-06 53.9 85 40.0
Gohir.D05G007300 Gossypium hirsutum HOM05D000574 ORTHO05D003995 9.2e-06 53.5 85 40.0
Gorai.009G007400 Gossypium raimondii HOM05D000574 ORTHO05D003995 9.2e-06 53.5 85 40.0


User provided reference genes

Program Settings