Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G46.29 Capsicum annuum HOM05D000023 ORTHO05D000014 8.4e-54 213.4 104 100.0
Nitab4.5_0000472g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 1.7e-38 162.5 96 83.3
Solyc03g007510.4 Solanum lycopersicum HOM05D000023 ORTHO05D000014 2.2e-38 162.2 97 82.5
Sopen03g003470 Solanum pennellii HOM05D000023 ORTHO05D000014 2.2e-38 162.2 97 82.5
Cpa.g.sc3.38 Carica papaya HOM05D000023 ORTHO05D000014 1.1e-34 149.8 97 73.2
ClCG01G000670 Citrullus lanatus HOM05D000023 ORTHO05D000014 2.5e-34 148.7 97 72.2
Cc02_g02000 Coffea canephora HOM05D000023 ORTHO05D000014 2.5e-34 148.7 97 75.3
CsaV3_5G000770 Cucumis sativus L. HOM05D000023 ORTHO05D000014 2.5e-34 148.7 97 72.2
TWI14G1170 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.3e-33 146.4 97 74.2
CSS0036184 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.7e-33 144.8 97 69.1
vmacro06584 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.7e-33 144.8 103 69.9
GSVIVG01028726001 Vitis vinifera HOM05D000023 ORTHO05D000014 4.8e-33 144.4 97 72.2
QL09p011205 Quercus lobata HOM05D000023 ORTHO05D000014 8.1e-33 143.7 96 70.8
Atru.chr1.286 Acer truncatum HOM05D000023 ORTHO05D000014 1.1e-32 143.3 97 71.1
CSS0012239 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.4e-32 142.9 95 68.4
Sed0019091 Sechium edule HOM05D000023 ORTHO05D000014 3.1e-32 141.7 97 69.1
MD01G1214000 Malus domestica HOM05D000023 ORTHO05D000014 4.0e-32 141.4 97 69.1
arahy.Tifrunner.gnm1.ann1.J9UGKB Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-32 140.2 103 66.0
arahy.Tifrunner.gnm1.ann1.L964KV Arachis hypogaea HOM05D000023 ORTHO05D000014 9.0e-32 140.2 103 66.0
Rhsim03G0197500 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.0e-31 139.0 103 68.0
Duzib205G1169 Durio zibethinus HOM05D000023 ORTHO05D000014 2.6e-31 138.7 97 69.1
Psat5g080600 Pisum sativum HOM05D000023 ORTHO05D000014 5.8e-31 137.5 97 67.0
RcHm_v2.0_Chr1g0379971 Rosa chinensis HOM05D000023 ORTHO05D000014 1.0e-30 136.7 97 66.0
Sabra12G0022600 Salix brachista HOM05D000023 ORTHO05D000014 1.0e-30 136.7 97 69.1
FvH4_7g30891 Fragaria vesca HOM05D000023 ORTHO05D000014 1.7e-30 136.0 97 66.0
MSTRG.27051 Avicennia marina HOM05D000023 ORTHO05D000014 2.2e-30 135.6 103 64.1
Aqoxy7G00206 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 2.9e-30 135.2 97 63.9
CAN.G445.2 Capsicum annuum HOM05D000023 ORTHO05D000014 2.9e-30 135.2 72 88.9
PGR042G0249 Punica granatum HOM05D000023 ORTHO05D000014 3.8e-30 134.8 97 68.0
Nn1g01787 Nelumbo nucifera HOM05D000023 ORTHO05D000014 4.9e-30 134.4 94 66.0
Ca_16668_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 6.5e-30 134.0 103 63.1
HanXRQChr05g0144091 Helianthus annuus HOM05D000023 ORTHO05D000014 1.4e-29 132.9 97 64.9
TPR.G26303 Trifolium pratense HOM05D000023 ORTHO05D000014 1.9e-29 132.5 103 63.1
CANSAT21G0690 Cannabis sativa HOM05D000023 ORTHO05D000014 7.1e-29 130.6 97 67.0
MBI06_g04283_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 3.5e-28 128.3 97 61.9
SGA_v2.0_scaffold192G40592 Striga asiatica HOM05D000023 ORTHO05D000014 4.6e-28 127.9 100 63.0
Lalb_Chr08g0240691 Lupinus albus HOM05D000023 ORTHO05D000014 1.3e-27 126.3 103 59.2
EL10Ac3g05358 Beta vulgaris HOM05D000023 ORTHO05D000014 6.2e-25 117.5 103 61.2
THA.LOC104813544 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 1.8e-24 115.9 98 61.2
Hund04822 Selenicereus undatus HOM05D000023 ORTHO05D000014 2.4e-24 115.5 103 60.2
AUR62031479 Chenopodium quinoa HOM05D000023 ORTHO05D000014 9.0e-24 113.6 103 61.2
CARHR074680 Cardamine hirsuta HOM05D000023 ORTHO05D000014 3.4e-23 111.7 104 56.7
AT1G79740 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 7.6e-23 110.5 104 55.8
AL2G41820 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 1.3e-22 109.8 104 55.8
Ah.13g069770 Amaranthus hybridus HOM05D000023 ORTHO05D000014 5.5e-21 104.4 103 54.4
HPP92_002832 Vanilla planifolia HOM05D000023 ORTHO05D000014 5.5e-21 104.4 94 58.5
Lj1g0002954 Lotus japonicus HOM05D000023 ORTHO05D000014 1.6e-20 102.8 75 65.3
PSO384G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 2.7e-20 102.1 78 66.7
CAN.G1930.2 Capsicum annuum HOM05D000023 ORTHO05D000014 4.6e-20 101.3 64 76.6
PSO135G0262 Papaver somniferum HOM05D000023 ORTHO05D000014 5.1e-19 97.8 78 64.1
Os01g0222700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 8.7e-19 97.1 99 51.5
MBI07_g11399_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.3e-14 83.2 51 70.6
Peaxi162Scf00904g00461 Petunia axillaris HOM05D000023 ORTHO05D000014 1.6e-12 76.3 41 82.9


User provided reference genes

Program Settings