Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G46.16 Capsicum annuum HOM05D007988 ORTHO05D009824 1.0e-158 563.5 328 100.0
Sopen04g026140 Solanum pennellii HOM05D007988 ORTHO05D009824 3.2e-91 339.3 338 72.8
PGSC0003DMG400002385 Solanum tuberosum HOM05D007988 ORTHO05D009824 5.1e-73 278.9 196 83.2
CSS0046822 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 6.3e-23 112.5 340 38.5
QL09p030989 Quercus lobata HOM05D007988 ORTHO05D009824 6.3e-23 112.5 342 39.8
Lj4P666T14 Lonicera japonica HOM05D007988 ORTHO05D009824 1.1e-22 111.7 345 39.7
Lj4P663T19 Lonicera japonica HOM05D007988 ORTHO05D009824 7.0e-22 109.0 340 39.1
GSVIVG01008783001 Vitis vinifera HOM05D007988 ORTHO05D009824 3.5e-21 106.7 353 41.4
Ciclev10004037m.g Citrus clementina HOM05D007988 ORTHO05D009824 5.0e-20 102.8 353 42.8
TAR381G0794 Trochodendron aralioides HOM05D007988 ORTHO05D009824 5.0e-20 102.8 339 39.2
Cc10_g13460 Coffea canephora HOM05D007988 ORTHO05D009824 6.6e-20 102.4 355 38.9
SGA_v2.0_scaffold52G18904 Striga asiatica HOM05D007988 ORTHO05D009824 8.6e-20 102.1 332 36.1
Potri.002G076200 Populus trichocarpa HOM05D007988 ORTHO05D009824 3.3e-19 100.1 361 34.3
Gohir.D05G240900 Gossypium hirsutum HOM05D007988 ORTHO05D009824 4.3e-19 99.8 357 37.0
Gorai.009G250000 Gossypium raimondii HOM05D007988 ORTHO05D009824 4.3e-19 99.8 357 37.0
Prupe.1G442100 Prunus persica HOM05D007988 ORTHO05D009824 5.6e-19 99.4 329 37.1
TWI60G0631 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 5.6e-19 99.4 357 35.0
Rhsim11G0074200 Rhododendron simsii HOM05D007988 ORTHO05D009824 9.5e-19 98.6 343 38.5
Duzib116G0104 Durio zibethinus HOM05D007988 ORTHO05D009824 1.6e-18 97.8 351 37.9
Gohir.A05G239200 Gossypium hirsutum HOM05D007988 ORTHO05D009824 2.1e-18 97.4 353 40.2
RcHm_v2.0_Chr6g0306951 Rosa chinensis HOM05D007988 ORTHO05D009824 2.8e-18 97.1 349 38.4
Oeu022143.1 Olea europaea HOM05D007988 ORTHO05D009824 4.7e-18 96.3 373 33.0
Thecc.08G135700 Theobroma cacao HOM05D007988 ORTHO05D009824 1.4e-17 94.7 346 41.6
MD15G1088100 Malus domestica HOM05D007988 ORTHO05D009824 1.8e-17 94.4 360 39.4
Haze_17653 Corylus avellana HOM05D007988 ORTHO05D009824 1.2e-16 91.7 338 37.0
Duzib041G0811 Durio zibethinus HOM05D007988 ORTHO05D009824 2.0e-16 90.9 351 37.6
Glyma.04G244300 Glycine max HOM05D007988 ORTHO05D009824 2.0e-16 90.9 357 38.7
Manes.02G170000 Manihot esculenta HOM05D007988 ORTHO05D009824 2.0e-16 90.9 358 33.0
Medtr3g088735 Medicago truncatula HOM05D007988 ORTHO05D009824 2.6e-16 90.5 339 39.8
Ca_16619_v3 Cicer arietinum L. HOM05D007988 ORTHO05D009824 7.5e-16 89.0 350 36.6
CiPaw.15G029500 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.7e-15 87.8 347 36.6
Duzib093G1224 Durio zibethinus HOM05D007988 ORTHO05D009824 3.7e-15 86.7 350 38.0
FAN27G1764 Fragaria x ananassa HOM05D007988 ORTHO05D009824 4.9e-15 86.3 348 38.5
Sabra05G0140800 Salix brachista HOM05D007988 ORTHO05D009824 4.9e-15 86.3 351 34.8
TWI34G1662 Tripterygium wilfordii HOM05D007988 ORTHO05D009824 8.3e-15 85.5 355 34.6
Atru.chr13.1616 Acer truncatum HOM05D007988 ORTHO05D009824 1.1e-14 85.1 349 37.5
COL.COLO4_33785 Corchorus olitorius HOM05D007988 ORTHO05D009824 1.1e-14 85.1 353 40.5
arahy.Tifrunner.gnm1.ann1.GX31L7 Arachis hypogaea HOM05D007988 ORTHO05D009824 5.4e-14 82.8 339 36.3
FvH4_2g35040 Fragaria vesca HOM05D007988 ORTHO05D009824 5.4e-14 82.8 341 39.0
Eucgr.F02525 Eucalyptus grandis HOM05D007988 ORTHO05D009824 9.2e-14 82.0 372 32.8
CiPaw.16G021200 Carya illinoinensis HOM05D007988 ORTHO05D009824 1.6e-13 81.3 344 37.2
Migut.C01082 Erythranthe guttata HOM05D007988 ORTHO05D009824 2.0e-13 80.9 340 36.8
arahy.Tifrunner.gnm1.ann1.1JY9DA Arachis hypogaea HOM05D007988 ORTHO05D009824 3.5e-13 80.1 339 36.9
TPR.G6352 Trifolium pratense HOM05D007988 ORTHO05D009824 3.5e-13 80.1 344 36.9
Cpa.g.sc64.159 Carica papaya HOM05D007988 ORTHO05D009824 4.6e-13 79.7 366 35.0
VMungo1309G2256 Vigna mungo HOM05D007988 ORTHO05D009824 1.7e-12 77.8 338 37.0
Nn1g08990 Nelumbo nucifera HOM05D007988 ORTHO05D009824 3.0e-12 77.0 345 31.0
Glyma.06G119000 Glycine max HOM05D007988 ORTHO05D009824 5.0e-12 76.3 361 36.6
Lj1g0027207 Lotus japonicus HOM05D007988 ORTHO05D009824 5.0e-12 76.3 346 38.2
Lalb_Chr10g0101461 Lupinus albus HOM05D007988 ORTHO05D009824 2.5e-11 73.9 344 34.9
Nn5g28477 Nelumbo nucifera HOM05D007988 ORTHO05D009824 9.5e-11 72.0 355 37.2
Dinv37735 Davidia involucrata HOM05D007988 ORTHO05D009824 2.8e-10 70.5 156 37.8
HanXRQChr09g0256671 Helianthus annuus HOM05D007988 ORTHO05D009824 2.8e-10 70.5 332 29.2
CANSAT25G2204 Cannabis sativa HOM05D007988 ORTHO05D009824 3.6e-10 70.1 396 30.8
EL10Ac1g01385 Beta vulgaris HOM05D007988 ORTHO05D009824 1.0e-09 68.6 373 35.1
Actinidia29496 Actinidia chinensis HOM05D000744 ORTHO05D000332 2.3e-09 67.4 336 36.3
FAN15G1013 Fragaria x ananassa HOM05D007988 ORTHO05D009824 6.8e-09 65.9 233 34.8
CSS0018515 Camellia sinensis var. sinensis HOM05D007988 ORTHO05D009824 1.5e-08 64.7 165 37.6
Lalb_Chr04g0253601 Lupinus albus HOM05D007988 ORTHO05D009824 2.0e-08 64.3 173 36.4
Psat0s3071g0240 Pisum sativum HOM05D007988 ORTHO05D009824 2.0e-08 64.3 233 31.3
ECA232G2067 Erigeron canadensis HOM05D007988 ORTHO05D009824 4.4e-08 63.2 345 34.5
Phvul.009G131400 Phaseolus vulgaris HOM05D007988 ORTHO05D009824 5.8e-08 62.8 356 37.6
AT1G21510 Arabidopsis thaliana HOM05D012069 ORTHO05D009824 7.5e-08 62.4 360 30.8
MBI06_g32176_MAGBIO Magnolia biondii HOM05D007988 ORTHO05D009824 9.8e-08 62.0 365 33.4
AUR62007686 Chenopodium quinoa HOM05D007988 ORTHO05D009824 1.3e-07 61.6 258 34.1
FAN20G0590 Fragaria x ananassa HOM05D007988 ORTHO05D009824 2.2e-07 60.8 173 37.6
BcaB07g32147 Brassica carinata HOM05D012069 ORTHO05D009824 3.7e-07 60.1 252 31.3
CsaV3_6G031310 Cucumis sativus L. HOM05D007988 ORTHO05D009824 6.4e-07 59.3 186 34.4
AL1G34650 Arabidopsis lyrata HOM05D012069 ORTHO05D009824 2.4e-06 57.4 356 30.6
A06p17540 Brassica napus HOM05D012069 ORTHO05D009824 3.2e-06 57.0 236 30.5
DCAR_003597 Daucus carota HOM05D007988 ORTHO05D009824 3.2e-06 57.0 349 31.5
Sed0016946 Sechium edule HOM05D007988 ORTHO05D009824 3.2e-06 57.0 343 28.9
BraA06t24850Z Brassica rapa HOM05D012069 ORTHO05D009824 5.4e-06 56.2 236 30.5
CARHR021870 Cardamine hirsuta HOM05D012069 ORTHO05D009824 5.4e-06 56.2 346 30.9
AUR62013453 Chenopodium quinoa HOM05D007988 ORTHO05D009824 5.4e-06 56.2 194 36.1
Carub.0001s2093 Capsella rubella HOM05D012069 ORTHO05D009824 7.0e-06 55.8 359 32.3


User provided reference genes

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