Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4596.1 Capsicum annuum HOM05D004064 ORTHO05D009561 6.4e-73 277.3 140 100.0
CAN.G257.9 Capsicum annuum HOM05D004064 ORTHO05D009561 1.7e-46 189.5 112 84.8
CAN.G1759.4 Capsicum annuum HOM05D004064 ORTHO05D009561 3.1e-43 178.7 119 75.6
Sopen12g005860 Solanum pennellii HOM05D000017 ORTHO05D000013 1.3e-41 173.3 146 65.8
Sopen05g012450 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-41 171.8 146 65.1
Sopen08g001370 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-41 171.8 146 65.1
Sopen09g011090 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-41 171.8 146 65.1
Sopen11g012650 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-41 171.8 146 65.1
Sopen11g013980 Solanum pennellii HOM05D000017 ORTHO05D009561 3.8e-41 171.8 146 65.1
Sopen11g026090 Solanum pennellii HOM05D000017 ORTHO05D000013 3.8e-41 171.8 146 65.1
Sopen01g018580 Solanum pennellii HOM05D004064 ORTHO05D009561 5.4e-40 167.9 141 62.4
Sopen06g017430 Solanum pennellii HOM05D000017 ORTHO05D000013 7.1e-40 167.5 146 63.7
Sopen02g010790 Solanum pennellii HOM05D000017 ORTHO05D009561 1.6e-39 166.4 141 63.8
Sopen05g012050 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-38 163.7 147 63.9
Sopen01g011730 Solanum pennellii HOM05D004064 ORTHO05D009561 8.7e-38 160.6 144 62.5
Sopen10g011860 Solanum pennellii HOM05D004064 ORTHO05D009561 4.3e-37 158.3 145 60.7
CAN.G53.40 Capsicum annuum HOM05D004064 ORTHO05D009561 5.6e-37 157.9 105 76.2
Sopen10g017570 Solanum pennellii HOM05D000017 ORTHO05D009561 5.6e-37 157.9 144 61.1
Sopen09g015990 Solanum pennellii HOM05D000017 ORTHO05D000013 7.3e-37 157.5 137 60.6
Sopen01g010980 Solanum pennellii HOM05D000017 ORTHO05D009561 9.6e-37 157.1 138 62.3
Sopen10g010720 Solanum pennellii HOM05D000017 ORTHO05D009561 2.1e-36 156.0 146 60.3
PGSC0003DMG400004103 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-36 156.0 143 61.5
Sopen03g028030 Solanum pennellii HOM05D000017 ORTHO05D009561 2.8e-36 155.6 139 58.3
Sopen11g010850 Solanum pennellii HOM05D000017 ORTHO05D009561 1.4e-35 153.3 136 64.0
Sopen06g016100 Solanum pennellii HOM05D004064 ORTHO05D009561 3.1e-35 152.1 145 60.7
PGSC0003DMG400026053 Solanum tuberosum HOM05D004064 ORTHO05D009561 9.0e-35 150.6 147 59.9
PGSC0003DMG400004104 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.5e-34 149.8 143 58.7
CAN.G362.17 Capsicum annuum HOM05D004064 ORTHO05D009561 1.3e-33 146.7 96 77.1
CAN.G456.22 Capsicum annuum HOM05D000017 ORTHO05D009561 1.3e-30 136.7 93 75.3
Sopen10g013120 Solanum pennellii HOM05D000017 ORTHO05D000013 5.1e-30 134.8 146 56.8
Sopen12g028900 Solanum pennellii HOM05D037232 ORTHO05D009561 3.3e-29 132.1 96 68.8
CAN.G853.3 Capsicum annuum HOM05D004064 ORTHO05D009561 1.6e-28 129.8 78 84.6
Sopen05g016460 Solanum pennellii HOM05D000004 ORTHO05D009561 2.1e-28 129.4 111 64.9
CAN.G673.18 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-23 111.7 78 71.8
CAN.G125.3 Capsicum annuum HOM05D000017 ORTHO05D009561 1.3e-22 110.2 75 77.3
Sopen10g014100 Solanum pennellii HOM05D000017 ORTHO05D000013 1.8e-22 109.8 133 51.9
Sopen10g021400 Solanum pennellii HOM05D000017 ORTHO05D009561 1.8e-22 109.8 110 56.4
PGSC0003DMG400042636 Solanum tuberosum HOM05D000017 ORTHO05D009561 6.7e-22 107.8 95 61.1
Sopen10g007460 Solanum pennellii HOM05D000017 ORTHO05D009561 8.7e-22 107.5 146 47.9
Peaxi162Scf00031g02423 Petunia axillaris HOM05D000017 ORTHO05D009561 4.3e-21 105.1 138 42.8
Sopen08g005490 Solanum pennellii HOM05D000017 ORTHO05D000013 4.8e-20 101.7 95 55.8
Peaxi162Scf00566g00021 Petunia axillaris HOM05D004064 ORTHO05D009561 1.4e-19 100.1 117 44.4
PGSC0003DMG400034895 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.0e-18 96.3 124 45.2
Peaxi162Scf00375g00430 Petunia axillaris HOM05D004064 ORTHO05D009561 2.6e-18 95.9 119 44.5
Sopen10g011870 Solanum pennellii HOM05D000017 ORTHO05D009561 5.8e-18 94.7 86 57.0
Sopen07g008650 Solanum pennellii HOM05D000017 ORTHO05D009561 1.9e-16 89.7 69 63.8
Peaxi162Scf01238g00022 Petunia axillaris HOM05D004064 ORTHO05D009561 7.1e-16 87.8 111 45.0
PGSC0003DMG400046188 Solanum tuberosum HOM05D004064 ORTHO05D011910 1.2e-15 87.0 108 41.7
PGSC0003DMG400039926 Solanum tuberosum HOM05D004064 ORTHO05D011910 4.6e-15 85.1 108 40.7
CAN.G563.3 Capsicum annuum HOM05D000017 ORTHO05D009561 1.3e-14 83.6 109 51.4
Nitab4.5_0002581g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.8e-14 83.2 120 39.2
Nitab4.5_0002845g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 2.3e-14 82.8 106 42.5
CAN.G318.3 Capsicum annuum HOM05D000017 ORTHO05D009561 3.9e-14 82.0 76 52.6
CAN.G147.9 Capsicum annuum HOM05D000541 ORTHO05D009561 5.1e-14 81.6 50 78.0
Nitab4.5_0003892g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009561 5.1e-14 81.6 94 43.6
Peaxi162Scf00553g00217 Petunia axillaris HOM05D004064 ORTHO05D009561 8.7e-14 80.9 115 40.0
Nitab4.5_0007351g0040 Nicotiana tabacum HOM05D004064 ORTHO05D009909 1.1e-13 80.5 120 38.3
Peaxi162Scf00022g00611 Petunia axillaris HOM05D004064 ORTHO05D009561 1.5e-13 80.1 129 38.0
Sopen11g024710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-13 79.7 107 38.3
Peaxi162Scf00004g00458 Petunia axillaris HOM05D004064 ORTHO05D009561 2.5e-13 79.3 105 41.9
PGSC0003DMG400017950 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.5e-13 79.3 109 38.5
Sopen01g020720 Solanum pennellii HOM05D004064 ORTHO05D011910 4.3e-13 78.6 107 37.4
Sopen05g016400 Solanum pennellii HOM05D000017 ORTHO05D011910 7.4e-13 77.8 107 37.4
Nitab4.5_0002311g0030 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.6e-13 77.4 75 46.7
Sopen02g014660 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-12 76.6 137 34.3
Sopen04g015180 Solanum pennellii HOM05D000004 ORTHO05D011910 1.6e-12 76.6 137 34.3
Sopen04g022370 Solanum pennellii HOM05D000017 ORTHO05D011910 1.6e-12 76.6 144 34.0
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.6e-12 76.6 137 34.3
Sopen08g005960 Solanum pennellii HOM05D004064 ORTHO05D011910 1.6e-12 76.6 104 37.5
Sopen08g008550 Solanum pennellii HOM05D004064 ORTHO05D011910 1.6e-12 76.6 137 34.3
PGSC0003DMG400031418 Solanum tuberosum HOM05D004064 ORTHO05D009561 2.1e-12 76.3 104 40.4
Nitab4.5_0005665g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009909 2.8e-12 75.9 133 35.3
Sopen02g010180 Solanum pennellii HOM05D000017 ORTHO05D009909 3.7e-12 75.5 78 48.7
Peaxi162Scf00270g00413 Petunia axillaris HOM05D004064 ORTHO05D009561 6.3e-12 74.7 138 36.2
Sopen02g009320 Solanum pennellii HOM05D000017 ORTHO05D011910 8.2e-12 74.3 137 33.6
Solyc07g042497.1 Solanum lycopersicum HOM05D004064 ORTHO05D011910 1.4e-11 73.6 107 35.5
PGSC0003DMG400014991 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.4e-11 73.6 104 37.5
PGSC0003DMG400046845 Solanum tuberosum HOM05D004064 ORTHO05D009561 1.4e-11 73.6 66 50.0
Nitab4.5_0001499g0080 Nicotiana tabacum HOM05D004064 ORTHO05D009561 1.8e-11 73.2 104 40.4
Sopen10g005830 Solanum pennellii HOM05D000017 ORTHO05D011910 2.4e-11 72.8 107 35.5
Peaxi162Scf00033g00082 Petunia axillaris HOM05D004064 ORTHO05D009561 3.1e-11 72.4 92 44.6
Sopen07g011250 Solanum pennellii HOM05D000017 ORTHO05D009561 3.1e-11 72.4 67 58.2
Sopen01g016940 Solanum pennellii HOM05D004064 ORTHO05D009909 5.3e-11 71.6 87 44.8
Nitab4.5_0021453g0010 Nicotiana tabacum HOM05D004064 ORTHO05D009909 9.0e-11 70.9 134 34.3
Peaxi162Scf00010g00072 Petunia axillaris HOM05D006921 ORTHO05D009185 1.2e-10 70.5 129 34.9
Sopen09g011110 Solanum pennellii HOM05D000017 ORTHO05D011910 2.0e-10 69.7 137 33.6
Sopen05g002620 Solanum pennellii HOM05D000017 ORTHO05D011910 2.6e-10 69.3 137 32.1
Peaxi162Scf00007g00831 Petunia axillaris HOM05D006921 ORTHO05D009185 3.4e-10 68.9 129 34.9
Nitab4.5_0001023g0170 Nicotiana tabacum HOM05D004064 ORTHO05D009561 4.5e-10 68.6 83 41.0
Solyc08g061275.1 Solanum lycopersicum HOM05D004064 ORTHO05D009561 4.5e-10 68.6 80 46.2
Sopen10g022390 Solanum pennellii HOM05D000017 ORTHO05D000013 1.0e-09 67.4 136 33.8
CAN.G1279.4 Capsicum annuum HOM05D004064 ORTHO05D009561 1.3e-09 67.0 99 36.4
Sopen03g017620 Solanum pennellii HOM05D004064 ORTHO05D009561 1.3e-09 67.0 130 31.5
Nitab4.5_0005436g0040 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.2e-09 66.2 99 37.4
Peaxi162Scf00296g00035 Petunia axillaris HOM05D004064 ORTHO05D009561 2.2e-09 66.2 105 40.0
PGSC0003DMG400011366 Solanum tuberosum HOM05D022869 ORTHO05D023010 2.2e-09 66.2 143 34.3
Sopen10g028660 Solanum pennellii HOM05D004064 ORTHO05D009561 3.8e-09 65.5 69 47.8
PGSC0003DMG400025344 Solanum tuberosum HOM05D004064 ORTHO05D009561 3.8e-09 65.5 68 45.6
Solyc11g010817.1 Solanum lycopersicum HOM05D022869 ORTHO05D023010 5.0e-09 65.1 139 36.0
Nitab4.5_0001461g0090 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.5e-09 64.7 75 42.7
Sopen01g026090 Solanum pennellii HOM05D006921 ORTHO05D009185 6.5e-09 64.7 114 36.8
Solyc12g035525.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 8.5e-09 64.3 112 34.8
Sopen02g013230 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 114 36.8
Sopen07g022780 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 111 35.1
Sopen08g008450 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 114 36.8
Sopen08g030170 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 114 36.8
Sopen09g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 114 36.8
Sopen12g025840 Solanum pennellii HOM05D000014 ORTHO05D011910 8.5e-09 64.3 102 37.3
Sopen12g026920 Solanum pennellii HOM05D000017 ORTHO05D000013 8.5e-09 64.3 114 36.8
Sopen10g027790 Solanum pennellii HOM05D006921 ORTHO05D009185 1.1e-08 63.9 136 36.0
Sopen02g003610 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-08 63.5 105 38.1
Sopen12g016630 Solanum pennellii HOM05D000017 ORTHO05D000013 1.4e-08 63.5 105 38.1
CAN.G83.8 Capsicum annuum HOM05D004064 ORTHO05D009561 1.9e-08 63.2 99 34.3
Peaxi162Scf00780g01011 Petunia axillaris HOM05D004064 ORTHO05D009561 1.9e-08 63.2 60 48.3
Sopen05g014940 Solanum pennellii HOM05D004064 ORTHO05D009909 1.9e-08 63.2 69 42.0
Sopen12g010990 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-08 62.8 100 35.0
Sopen12g012540 Solanum pennellii HOM05D000017 ORTHO05D000013 2.5e-08 62.8 114 36.8
Nitab4.5_0004504g0070 Nicotiana tabacum HOM05D004064 ORTHO05D009561 3.2e-08 62.4 97 36.1
Sopen01g027250 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Sopen02g036070 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Sopen03g005240 Solanum pennellii HOM05D000017 ORTHO05D009185 3.2e-08 62.4 110 33.6
Sopen04g019600 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Sopen04g025160 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Sopen08g012130 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Sopen08g021210 Solanum pennellii HOM05D000017 ORTHO05D000013 3.2e-08 62.4 110 33.6
Solyc07g032784.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.2e-08 62.0 109 34.9
Sopen12g020620 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-08 62.0 101 34.7
Sopen12g021170 Solanum pennellii HOM05D000017 ORTHO05D000013 4.2e-08 62.0 101 35.6
Sopen05g025220 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-08 61.6 101 34.7
Sopen10g027160 Solanum pennellii HOM05D000017 ORTHO05D000013 5.5e-08 61.6 101 34.7
PGSC0003DMG400012698 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.5e-08 61.6 77 40.3
PGSC0003DMG400043277 Solanum tuberosum HOM05D004064 ORTHO05D009909 5.5e-08 61.6 65 46.2
Nitab4.5_0001041g0110 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.2e-08 61.2 99 34.3
Nitab4.5_0004576g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 1.6e-07 60.1 110 33.6
Peaxi162Scf00136g01915 Petunia axillaris HOM05D006921 ORTHO05D009185 1.6e-07 60.1 88 40.9
Nitab4.5_0005016g0010 Nicotiana tabacum HOM05D006921 ORTHO05D009185 2.1e-07 59.7 81 37.0
Peaxi162Scf00086g00199 Petunia axillaris HOM05D006921 ORTHO05D009185 3.6e-07 58.9 126 34.1
Peaxi162Scf00375g00621 Petunia axillaris HOM05D000017 ORTHO05D001349 3.6e-07 58.9 121 37.2
Sopen06g011350 Solanum pennellii HOM05D000017 ORTHO05D009185 3.6e-07 58.9 114 35.1
Solyc03g044355.1 Solanum lycopersicum HOM05D006921 ORTHO05D009185 4.6e-07 58.5 101 33.7
Nitab4.5_0008390g0050 Nicotiana tabacum HOM05D004064 ORTHO05D009561 6.1e-07 58.2 63 42.9
CAN.G391.3 Capsicum annuum HOM05D004064 ORTHO05D009561 7.9e-07 57.8 95 32.6
Nitab4.5_0005436g0020 Nicotiana tabacum HOM05D006921 ORTHO05D009185 7.9e-07 57.8 135 31.9
Sopen07g022410 Solanum pennellii HOM05D004064 ORTHO05D011910 7.9e-07 57.8 56 44.6
Sopen10g006650 Solanum pennellii HOM05D000017 ORTHO05D000013 7.9e-07 57.8 101 32.7
CAN.G2.10 Capsicum annuum HOM05D004064 ORTHO05D009561 1.0e-06 57.4 53 45.3
Peaxi162Scf00268g00039 Petunia axillaris HOM05D006921 ORTHO05D009185 1.0e-06 57.4 103 35.9
Peaxi162Scf00108g00115 Petunia axillaris HOM05D004064 ORTHO05D009561 1.3e-06 57.0 65 44.6
CAN.G321.28 Capsicum annuum HOM05D004064 ORTHO05D009909 1.8e-06 56.6 53 45.3
Sopen09g015000 Solanum pennellii HOM05D004064 ORTHO05D009909 1.8e-06 56.6 55 47.3
Nitab4.5_0000444g0290 Nicotiana tabacum HOM05D000017 ORTHO05D001349 3.0e-06 55.8 114 34.2
Nitab4.5_0009037g0040 Nicotiana tabacum HOM05D000017 ORTHO05D009364 3.0e-06 55.8 114 35.1
Peaxi162Scf00145g01531 Petunia axillaris HOM05D006921 ORTHO05D009185 3.0e-06 55.8 100 31.0
Peaxi162Scf00385g00076 Petunia axillaris HOM05D004064 ORTHO05D009561 5.1e-06 55.1 53 50.9
PGSC0003DMG400037601 Solanum tuberosum HOM05D010431 ORTHO05D016891 5.1e-06 55.1 88 36.4
Sopen08g013500 Solanum pennellii HOM05D000004 ORTHO05D000002 6.7e-06 54.7 78 37.2
Solyc07g017545.1 Solanum lycopersicum HOM05D000017 ORTHO05D009185 8.7e-06 54.3 95 33.7


User provided reference genes

Program Settings