Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 8.9e-213 743.4 398 100.0
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 3.0e-184 648.7 401 88.8
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 8.7e-184 647.1 401 89.0
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 1.9e-183 646.0 401 88.3
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 1.4e-173 613.2 402 85.1
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 2.0e-172 609.4 401 85.3
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.8e-168 596.3 397 82.9
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 6.7e-152 541.2 417 69.5
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 9.7e-151 537.3 399 71.4
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 1.6e-145 520.0 400 69.2
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 3.6e-145 518.8 399 69.4
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 4.8e-142 508.4 397 65.5
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 2.6e-140 502.7 397 65.5
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 7.7e-140 501.1 400 66.8
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 1.1e-138 497.3 385 65.5
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 5.5e-138 495.0 399 67.4
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 2.7e-137 492.7 401 66.8
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 6.1e-137 491.5 399 66.7
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 1.0e-136 490.7 423 63.4
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 3.0e-136 489.2 388 63.1
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 3.9e-136 488.8 393 66.9
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 8.8e-136 487.6 399 66.4
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 5.7e-135 485.0 399 65.4
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 1.7e-134 483.4 397 67.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 2.4e-133 479.6 399 64.9
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 7.0e-133 478.0 395 67.3
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 1.2e-132 477.2 398 64.8
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 1.2e-132 477.2 454 57.5
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 2.0e-132 476.5 399 63.4
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 2.6e-132 476.1 398 63.6
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 5.9e-132 474.9 401 64.6
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 1.3e-131 473.8 401 64.3
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.3e-131 473.8 408 63.2
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 3.8e-131 472.2 396 66.9
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.5e-130 470.3 386 67.1
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 4.2e-130 468.8 400 64.5
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 5.5e-130 468.4 401 63.8
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 1.2e-129 467.2 411 63.3
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 2.7e-129 466.1 398 62.8
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 2.7e-129 466.1 398 62.8
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.4e-128 463.8 380 66.1
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 1.8e-128 463.4 402 64.7
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 7.5e-127 458.0 368 62.8
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 3.1e-125 452.6 408 60.3
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.1e-125 452.2 411 61.6
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 7.0e-125 451.4 411 61.6
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 2.2e-123 446.4 411 61.3
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 2.2e-123 446.4 412 60.0
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 1.1e-122 444.1 396 62.4
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 2.1e-121 439.9 411 58.2
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 2.7e-121 439.5 399 60.7
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 3.0e-120 436.0 402 58.7
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.5e-119 433.7 397 60.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 2.0e-119 433.3 389 62.0
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.4e-117 427.2 403 59.3
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 7.7e-116 421.4 394 60.4
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 7.7e-116 421.4 401 59.6
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 2.3e-115 419.9 376 56.9
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 1.4e-112 410.6 396 57.6
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 2.3e-112 409.8 403 58.6
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 6.8e-112 408.3 392 58.4
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 1.5e-111 407.1 399 59.4
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 3.4e-111 406.0 393 59.8
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 2.8e-110 402.9 409 58.9
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 6.3e-110 401.7 419 57.5
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 6.3e-110 401.7 279 70.6
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 6.6e-107 391.7 407 57.0
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 1.5e-106 390.6 382 57.9
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 2.3e-104 383.3 399 53.9
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 2.6e-103 379.8 270 70.0
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 4.4e-103 379.0 270 68.1
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 7.5e-103 378.3 282 65.6
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 6.4e-102 375.2 420 56.4
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.4e-101 374.0 313 62.0
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 2.4e-101 373.2 406 57.9
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 6.0e-100 368.6 408 55.1
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 7.8e-100 368.2 402 54.5
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 7.8e-100 368.2 247 72.5
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.0e-99 367.9 405 54.1
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 2.3e-99 366.7 400 54.0
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 3.9e-99 365.9 388 52.6
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 6.6e-99 365.2 394 53.0
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 1.9e-98 363.6 400 54.5
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 1.9e-98 363.6 402 53.7
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 7.3e-98 361.7 415 51.1
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 3.6e-97 359.4 402 53.7
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 9.8e-95 351.3 379 53.6
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 1.2e-92 344.4 290 60.3
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 1.2e-92 344.4 356 52.8
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 1.1e-90 337.8 464 46.8
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 6.0e-84 315.5 218 73.4
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 1.5e-82 310.8 336 53.0
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 2.4e-80 303.5 375 46.7
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.7e-78 297.4 377 47.5
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.3e-70 271.2 181 75.7
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 4.9e-70 269.2 414 42.8
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 2.4e-69 266.9 401 40.6
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.4e-64 251.1 435 42.8
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 9.0e-64 248.4 378 43.4
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 7.6e-63 245.4 395 40.5
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 8.1e-57 225.3 392 43.1
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 7.6e-55 218.8 359 40.9
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 3.7e-49 199.9 309 41.4
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 1.1e-45 188.3 197 56.9
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 5.7e-42 176.0 136 64.0
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 3.4e-31 140.2 137 46.7
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 3.3e-26 123.6 159 47.8
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 2.9e-22 110.5 83 69.9
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 6.3e-17 92.8 193 39.4
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 1.5e-10 71.6 62 58.1
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 1.7e-09 68.2 42 73.8


User provided reference genes

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