Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G45.9 Capsicum annuum HOM05D000843 ORTHO05D013550 3.1e-37 157.9 78 100.0
CAN.G52.5 Capsicum annuum HOM05D000843 ORTHO05D013550 3.6e-33 144.4 78 89.7
CAN.G363.20 Capsicum annuum HOM05D000843 ORTHO05D013550 1.1e-29 132.9 78 83.3
CAN.G177.20 Capsicum annuum HOM05D000011 ORTHO05D009225 8.5e-27 123.2 71 81.7
CAN.G613.3 Capsicum annuum HOM05D000843 ORTHO05D013550 5.5e-26 120.6 77 77.9
CAN.G1074.10 Capsicum annuum HOM05D000843 ORTHO05D013550 2.1e-17 92.0 72 70.8
CAN.G156.13 Capsicum annuum HOM05D000843 ORTHO05D013550 1.4e-16 89.4 51 84.3
CAN.G65.222 Capsicum annuum HOM05D000843 ORTHO05D000698 3.0e-16 88.2 53 84.9
Solyc06g073720.3 Solanum lycopersicum HOM05D000843 ORTHO05D000698 1.1e-13 79.7 54 79.6
Sopen06g030120 Solanum pennellii HOM05D000843 ORTHO05D000698 1.1e-13 79.7 54 79.6
Nitab4.5_0002184g0030 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.4e-13 79.3 53 73.6
PGSC0003DMG400005915 Solanum tuberosum HOM05D000843 ORTHO05D000698 4.1e-13 77.8 48 81.2
Nitab4.5_0000271g0040 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.7e-12 75.1 53 67.9
Solyc06g073730.2 Solanum lycopersicum HOM05D000843 ORTHO05D000698 7.8e-12 73.6 53 73.6
Nitab4.5_0002184g0010 Nicotiana tabacum HOM05D000843 ORTHO05D000698 1.7e-11 72.4 53 66.0
Nitab4.5_0000271g0090 Nicotiana tabacum HOM05D000843 ORTHO05D000698 2.3e-11 72.0 53 69.8
CAN.G864.1 Capsicum annuum HOM05D000843 ORTHO05D000698 2.9e-11 71.6 53 66.0
Nitab4.5_0000271g0110 Nicotiana tabacum HOM05D000843 ORTHO05D000698 5.0e-11 70.9 53 67.9
Sopen06g030130 Solanum pennellii HOM05D000843 ORTHO05D000698 6.6e-11 70.5 53 71.7
PGSC0003DMG400008712 Solanum tuberosum HOM05D000843 ORTHO05D000698 4.3e-10 67.8 53 67.9
Nitab4.5_0007649g0020 Nicotiana tabacum HOM05D000843 ORTHO05D000698 7.3e-10 67.0 51 68.6
Cc01_g07490 Coffea canephora HOM05D000843 ORTHO05D000698 9.5e-10 66.6 53 64.2
Nitab4.5_0000428g0210 Nicotiana tabacum HOM05D000843 ORTHO05D000698 9.5e-10 66.6 51 62.7
Peaxi162Scf00342g00073 Petunia axillaris HOM05D000843 ORTHO05D000698 9.5e-10 66.6 51 64.7
CAN.G65.223 Capsicum annuum HOM05D000843 ORTHO05D000698 1.2e-09 66.2 53 64.2
Peaxi162Scf00526g00042 Petunia axillaris HOM05D000843 ORTHO05D000698 1.6e-09 65.9 52 67.3
Sopen01g004640 Solanum pennellii HOM05D000843 ORTHO05D000698 2.1e-09 65.5 53 66.0
Dinv25741 Davidia involucrata HOM05D000843 ORTHO05D000698 2.8e-09 65.1 53 64.2
Actinidia22477 Actinidia chinensis HOM05D000843 ORTHO05D000698 6.2e-09 63.9 53 64.2
Solyc01g009170.4 Solanum lycopersicum HOM05D000843 ORTHO05D000698 1.0e-08 63.2 53 64.2
Potri.009G159200 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.8e-08 62.4 53 64.2
PGSC0003DMG400005914 Solanum tuberosum HOM05D000843 ORTHO05D000698 2.3e-08 62.0 47 70.2
Gohir.D07G172550 Gossypium hirsutum HOM05D000843 ORTHO05D013550 3.1e-08 61.6 53 58.5
Actinidia22476 Actinidia chinensis HOM05D000843 ORTHO05D000698 6.8e-08 60.5 53 62.3
Gohir.A08G196600 Gossypium hirsutum HOM05D000843 ORTHO05D000698 6.8e-08 60.5 53 56.6
Gohir.D08G213800 Gossypium hirsutum HOM05D000843 ORTHO05D000698 6.8e-08 60.5 53 56.6
Gohir.D12G083502 Gossypium hirsutum HOM05D000843 ORTHO05D013550 6.8e-08 60.5 53 56.6
Gorai.001G192700 Gossypium raimondii HOM05D000843 ORTHO05D013550 6.8e-08 60.5 53 56.6
Gorai.004G227800 Gossypium raimondii HOM05D000843 ORTHO05D000698 6.8e-08 60.5 53 56.6
Glyma.20G051500 Glycine max HOM05D000843 ORTHO05D000698 1.2e-07 59.7 53 54.7
Potri.004G197400 Populus trichocarpa HOM05D000843 ORTHO05D000698 1.2e-07 59.7 53 60.4
Thecc.09G338000 Theobroma cacao HOM05D000843 ORTHO05D000698 1.2e-07 59.7 53 56.6
Dinv10728 Davidia involucrata HOM05D000843 ORTHO05D000698 1.5e-07 59.3 53 60.4
Medtr5g087790 Medicago truncatula HOM05D000843 ORTHO05D000698 1.5e-07 59.3 53 56.6
Phvul.008G207000 Phaseolus vulgaris HOM05D000843 ORTHO05D000698 1.5e-07 59.3 53 58.5
Ca_06157_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 2.0e-07 58.9 53 54.7
Ca_29849_v3 Cicer arietinum L. HOM05D000843 ORTHO05D000698 2.0e-07 58.9 53 54.7
Oeu022225.1 Olea europaea HOM05D000843 ORTHO05D000698 2.0e-07 58.9 53 58.5
Psat2g022320 Pisum sativum HOM05D000843 ORTHO05D000698 2.0e-07 58.9 53 54.7
TPR.G22218 Trifolium pratense HOM05D000843 ORTHO05D000698 2.0e-07 58.9 53 54.7
Duzib168G1232 Durio zibethinus HOM05D000843 ORTHO05D000698 2.6e-07 58.5 53 54.7
Gorai.013G266300 Gossypium raimondii HOM05D000843 ORTHO05D000698 2.6e-07 58.5 53 58.5
Sabra09G0124500 Salix brachista HOM05D000843 ORTHO05D000698 3.4e-07 58.2 53 60.4
SalBow6G1804 Salvia bowleyana HOM05D000843 ORTHO05D000698 3.4e-07 58.2 54 57.4
Glyma.02G274600 Glycine max HOM05D000843 ORTHO05D000698 4.4e-07 57.8 53 56.6
Manes.04G052000 Manihot esculenta HOM05D000843 ORTHO05D000698 4.4e-07 57.8 53 58.5
Glyma.13G076700 Glycine max HOM05D000843 ORTHO05D000698 5.8e-07 57.4 53 52.8
Glyma.14G041500 Glycine max HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 56.6
Oeu026661.1 Olea europaea HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 52.8
Sed0007953 Sechium edule HOM05D000843 ORTHO05D000698 7.5e-07 57.0 53 58.5
LjContig00564g0001972 Lotus japonicus HOM05D000843 ORTHO05D000698 9.8e-07 56.6 53 54.7
CSS0042368 Camellia sinensis var. sinensis HOM05D000843 ORTHO05D000698 1.3e-06 56.2 53 60.4
Duzib150G0618 Durio zibethinus HOM05D000843 ORTHO05D000698 1.3e-06 56.2 53 50.9
Oeu048808.1 Olea europaea HOM05D000843 ORTHO05D000698 1.7e-06 55.8 54 53.7
Rhsim01G0196400 Rhododendron simsii HOM05D000843 ORTHO05D000698 1.7e-06 55.8 53 56.6
Sabra04G0133800 Salix brachista HOM05D000843 ORTHO05D000698 1.7e-06 55.8 53 56.6
Eucgr.J00631 Eucalyptus grandis HOM05D000843 ORTHO05D000698 2.9e-06 55.1 53 54.7
arahy.Tifrunner.gnm1.ann1.J729H0 Arachis hypogaea HOM05D000843 ORTHO05D000698 3.7e-06 54.7 53 52.8
arahy.Tifrunner.gnm1.ann1.S7XF8N Arachis hypogaea HOM05D000843 ORTHO05D000698 3.7e-06 54.7 53 52.8
Hma1.2p1_0218F.1_g092710 Hydrangea macrophylla HOM05D000843 ORTHO05D000698 3.7e-06 54.7 53 50.9
Atru.chr3.2880 Acer truncatum HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 50.9
MELO3C015633.2 Cucumis melo HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 52.8
Gohir.A05G101500 Gossypium hirsutum HOM05D000843 ORTHO05D000698 4.9e-06 54.3 53 50.9
CsaV3_1G042150 Cucumis sativus L. HOM05D000843 ORTHO05D000698 6.4e-06 53.9 53 52.8
THA.LOC104826471 Tarenaya hassleriana HOM05D000843 ORTHO05D000698 6.4e-06 53.9 53 49.1
BcaC05g28283 Brassica carinata HOM05D000843 ORTHO05D000698 8.3e-06 53.5 53 54.7
C05p43310 Brassica napus HOM05D000843 ORTHO05D000698 8.3e-06 53.5 53 54.7
BolC5t33063H Brassica oleracea HOM05D000843 ORTHO05D000698 8.3e-06 53.5 53 54.7


User provided reference genes

Program Settings