Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G449.43 Capsicum annuum HOM05D000264 ORTHO05D000152 1.2e-59 233.0 124 100.0
CAN.G694.52 Capsicum annuum HOM05D000264 ORTHO05D000152 5.0e-53 211.1 121 92.6
CAN.G694.59 Capsicum annuum HOM05D000264 ORTHO05D000152 2.1e-51 205.7 121 87.6
CAN.G694.66 Capsicum annuum HOM05D000264 ORTHO05D000152 1.0e-50 203.4 121 88.4
CAN.G208.90 Capsicum annuum HOM05D000264 ORTHO05D000152 3.9e-50 201.4 121 79.3
CAN.G694.61 Capsicum annuum HOM05D000264 ORTHO05D000152 8.7e-50 200.3 121 88.4
CAN.G2142.1 Capsicum annuum HOM05D000264 ORTHO05D000152 2.2e-48 195.7 122 81.1
CAN.G449.50 Capsicum annuum HOM05D000264 ORTHO05D000152 1.5e-38 162.9 102 76.5
Nitab4.5_0012130g0010 Nicotiana tabacum HOM05D000264 ORTHO05D000152 4.5e-38 161.4 121 67.8
CAN.G449.48 Capsicum annuum HOM05D000264 ORTHO05D000152 2.2e-37 159.1 123 65.0
CAN.G126.71 Capsicum annuum HOM05D000264 ORTHO05D000152 8.5e-37 157.1 114 68.4
CAN.G694.68 Capsicum annuum HOM05D000264 ORTHO05D000152 1.4e-36 156.4 90 82.2
CAN.G861.10 Capsicum annuum HOM05D000264 ORTHO05D000152 3.2e-36 155.2 123 62.6
CAN.G449.41 Capsicum annuum HOM05D000264 ORTHO05D000152 5.5e-36 154.5 123 73.2
CAN.G694.73 Capsicum annuum HOM05D000264 ORTHO05D000152 9.4e-36 153.7 123 65.0
CAN.G126.62 Capsicum annuum HOM05D000264 ORTHO05D000152 2.1e-35 152.5 123 62.6
CAN.G694.56 Capsicum annuum HOM05D000264 ORTHO05D000152 2.7e-35 152.1 123 70.7
Peaxi162Scf00156g01012 Petunia axillaris HOM05D000264 ORTHO05D000152 1.8e-34 149.4 112 66.1
CAN.G126.67 Capsicum annuum HOM05D000264 ORTHO05D000152 2.3e-34 149.1 123 61.8
CAN.G449.15 Capsicum annuum HOM05D000264 ORTHO05D000152 2.3e-34 149.1 123 63.4
CAN.G1976.1 Capsicum annuum HOM05D000264 ORTHO05D000152 3.0e-34 148.7 123 63.4
CAN.G694.54 Capsicum annuum HOM05D000264 ORTHO05D000152 6.7e-34 147.5 123 61.0
CAN.G126.58 Capsicum annuum HOM05D000264 ORTHO05D000152 1.1e-33 146.7 94 76.6
CAN.G126.54 Capsicum annuum HOM05D000264 ORTHO05D000152 4.4e-33 144.8 94 75.5
CAN.G208.89 Capsicum annuum HOM05D000264 ORTHO05D000152 4.4e-33 144.8 123 71.5
CAN.G694.51 Capsicum annuum HOM05D000264 ORTHO05D000152 5.7e-33 144.4 123 61.8
CAN.G694.71 Capsicum annuum HOM05D000264 ORTHO05D000152 1.7e-32 142.9 115 62.6
CAN.G126.59 Capsicum annuum HOM05D000264 ORTHO05D000152 2.8e-32 142.1 121 60.3
CAN.G1342.5 Capsicum annuum HOM05D000264 ORTHO05D000152 1.1e-31 140.2 123 60.2
CAN.G449.63 Capsicum annuum HOM05D000264 ORTHO05D000152 2.4e-31 139.0 123 59.3
CAN.G1173.7 Capsicum annuum HOM05D000264 ORTHO05D000152 1.6e-30 136.3 128 57.0
CAN.G404.49 Capsicum annuum HOM05D000264 ORTHO05D000152 2.6e-30 135.6 127 56.7
CAN.G694.65 Capsicum annuum HOM05D000264 ORTHO05D000152 3.5e-30 135.2 114 70.2
CAN.G694.75 Capsicum annuum HOM05D000264 ORTHO05D000152 5.9e-30 134.4 114 61.4
CAN.G694.60 Capsicum annuum HOM05D000264 ORTHO05D000152 7.7e-30 134.0 114 68.4
CAN.G1342.4 Capsicum annuum HOM05D000264 ORTHO05D000152 1.0e-29 133.7 110 71.8
CAN.G449.40 Capsicum annuum HOM05D000264 ORTHO05D000152 1.3e-29 133.3 114 68.4
CAN.G694.67 Capsicum annuum HOM05D000264 ORTHO05D000152 3.8e-29 131.7 109 62.4
CAN.G500.26 Capsicum annuum HOM05D000264 ORTHO05D000152 6.5e-29 131.0 114 67.5
CAN.G694.63 Capsicum annuum HOM05D000264 ORTHO05D000152 8.5e-29 130.6 114 59.6
CAN.G694.74 Capsicum annuum HOM05D000264 ORTHO05D000152 3.6e-27 125.2 110 56.4
CAN.G126.73 Capsicum annuum HOM05D000264 ORTHO05D000152 8.0e-27 124.0 83 72.3
CAN.G449.16 Capsicum annuum HOM05D000264 ORTHO05D000152 8.0e-27 124.0 83 73.5
CAN.G694.58 Capsicum annuum HOM05D000264 ORTHO05D000152 1.4e-26 123.2 75 77.3
CAN.G449.70 Capsicum annuum HOM05D000264 ORTHO05D000152 8.8e-26 120.6 113 56.6
Nitab4.5_0003058g0060 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.8e-26 120.6 121 63.6
PGSC0003DMG400027643 Solanum tuberosum HOM05D000264 ORTHO05D000152 7.5e-25 117.5 117 63.2
Nitab4.5_0000462g0150 Nicotiana tabacum HOM05D000264 ORTHO05D000152 1.3e-24 116.7 122 63.9
CAN.G449.65 Capsicum annuum HOM05D000264 ORTHO05D000152 6.3e-24 114.4 115 63.5
Solyc07g061750.4 Solanum lycopersicum HOM05D000264 ORTHO05D000152 6.3e-24 114.4 117 61.5
Nitab4.5_0000476g0180 Nicotiana tabacum HOM05D000264 ORTHO05D000152 3.5e-22 108.6 95 56.8
CAN.G449.66 Capsicum annuum HOM05D000264 ORTHO05D000152 1.7e-21 106.3 87 62.1
CAN.G911.30 Capsicum annuum HOM05D000264 ORTHO05D000152 6.5e-21 104.4 112 52.7
Peaxi162Scf00156g01113 Petunia axillaris HOM05D000264 ORTHO05D000152 7.2e-20 100.9 107 55.1
Peaxi162Scf00004g00071 Petunia axillaris HOM05D001883 ORTHO05D000152 1.2e-19 100.1 71 64.8
Nitab4.5_0002458g0120 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.0e-19 97.4 113 57.5
Nitab4.5_0025689g0010 Nicotiana tabacum HOM05D000264 ORTHO05D000152 8.8e-18 94.0 110 58.2
Peaxi162Scf00070g00611 Petunia axillaris HOM05D000264 ORTHO05D000152 3.7e-16 88.6 122 45.1
CAN.G126.72 Capsicum annuum HOM05D000264 ORTHO05D000152 5.0e-13 78.2 97 49.5
Nitab4.5_0012130g0020 Nicotiana tabacum HOM05D000264 ORTHO05D000152 5.0e-13 78.2 69 59.4
Hma1.2p1_1193F.1_g265660 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.7e-11 71.6 133 36.1
Hma1.2p1_1193F.1_g265650 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.4e-10 70.1 133 34.6
Hma1.2p1_1276F.1_g272240 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.0e-10 68.9 130 35.4
CSS0036307 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 8.8e-10 67.4 122 36.1
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 1.2e-09 67.0 137 35.0
Dinv29924 Davidia involucrata HOM05D000264 ORTHO05D000152 1.2e-09 67.0 137 35.0
Dinv40710 Davidia involucrata HOM05D000264 ORTHO05D000152 2.6e-09 65.9 128 32.0
CSS0044576 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 4.4e-09 65.1 133 39.8
CAN.G449.49 Capsicum annuum HOM05D000264 ORTHO05D000152 5.7e-09 64.7 121 37.2
CAN.G694.57 Capsicum annuum HOM05D000264 ORTHO05D000152 5.7e-09 64.7 75 50.7
Hma1.2p1_1276F.1_g272230 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.5e-09 64.3 133 33.8
Rhsim09G0108700 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.5e-09 64.3 132 31.1
CSS0046265 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.8e-09 63.9 128 32.8
Nitab4.5_0012704g0020 Nicotiana tabacum HOM05D000264 ORTHO05D000152 9.8e-09 63.9 71 52.1
Actinidia04481 Actinidia chinensis HOM05D000264 ORTHO05D000152 1.3e-08 63.5 132 35.6
Hma1.2p1_0913F.1_g236100 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.3e-08 63.5 133 33.1
CAN.G126.74 Capsicum annuum HOM05D000264 ORTHO05D000152 1.7e-08 63.2 114 37.7
Hma1.2p1_1193F.1_g265640 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.7e-08 63.2 131 35.1
Dinv44627 Davidia involucrata HOM05D000264 ORTHO05D000152 2.2e-08 62.8 93 34.4
Lj4A628G55 Lonicera japonica HOM05D000264 ORTHO05D000152 2.2e-08 62.8 139 31.7
Hma1.2p1_0276F.1_g111540 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.7e-08 62.0 134 33.6
Lj6A647T16 Lonicera japonica HOM05D000264 ORTHO05D000152 3.7e-08 62.0 131 29.8
Sc07g0003560 Simmondsia chinensis HOM05D000264 ORTHO05D000152 3.7e-08 62.0 133 30.8
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 4.9e-08 61.6 132 30.3
Hma1.2p1_1193F.1_g265581 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 4.9e-08 61.6 133 32.3
TAR624G1302 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.9e-08 61.6 137 29.9
vmacro04094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 4.9e-08 61.6 132 30.3
CAN.G449.45 Capsicum annuum HOM05D000264 ORTHO05D000152 6.3e-08 61.2 45 60.0
Lj6P649T13 Lonicera japonica HOM05D000264 ORTHO05D000152 6.3e-08 61.2 133 30.1
EL10Ac8g19123 Beta vulgaris HOM05D007624 ORTHO05D013505 8.3e-08 60.8 125 33.6
vmacro22812 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 8.3e-08 60.8 127 33.1
COL.COLO4_30202 Corchorus olitorius HOM05D000264 ORTHO05D000152 1.4e-07 60.1 125 29.6
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-07 60.1 134 32.1
Lj3C788T7 Lonicera japonica HOM05D000264 ORTHO05D000152 1.4e-07 60.1 133 31.6
Hma1.2p1_1193F.1_g265570 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 1.8e-07 59.7 129 32.6
Prupe.4G202700 Prunus persica HOM05D000264 ORTHO05D000152 1.8e-07 59.7 133 27.8
Rhsim04G0192400 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.8e-07 59.7 145 29.0
vmacro12293 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 1.8e-07 59.7 124 31.5
DCAR_024223 Daucus carota HOM05D000264 ORTHO05D000152 2.4e-07 59.3 113 31.0
Nn1g06999 Nelumbo nucifera HOM05D000264 ORTHO05D000152 2.4e-07 59.3 139 38.1
RcHm_v2.0_Chr5g0027141 Rosa chinensis HOM05D000264 ORTHO05D000152 2.4e-07 59.3 138 33.3
Hma1.2p1_1276F.1_g272220 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 3.1e-07 58.9 95 37.9
Rhsim04G0191900 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.1e-07 58.9 101 30.7
Dinv40709 Davidia involucrata HOM05D000264 ORTHO05D000152 4.1e-07 58.5 132 37.9
Lj6A649T19 Lonicera japonica HOM05D000264 ORTHO05D000152 4.1e-07 58.5 132 36.4
Potri.019G108200 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.1e-07 58.5 136 35.3
RcHm_v2.0_Chr5g0027111 Rosa chinensis HOM05D000264 ORTHO05D000152 4.1e-07 58.5 138 34.1
Sc07g0003540 Simmondsia chinensis HOM05D000264 ORTHO05D000152 4.1e-07 58.5 132 29.5
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 5.4e-07 58.2 75 40.0
Dinv14025 Davidia involucrata HOM05D000001 ORTHO05D000003 5.4e-07 58.2 131 29.8
Eucgr.H02695 Eucalyptus grandis HOM05D000264 ORTHO05D000152 5.4e-07 58.2 136 30.9
CSS0032786 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 9.2e-07 57.4 124 34.7
Dinv23656 Davidia involucrata HOM05D000264 ORTHO05D000152 9.2e-07 57.4 136 27.9
Eucgr.D01531 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-06 56.6 136 29.4
FAN16G1262 Fragaria x ananassa HOM05D000264 ORTHO05D000152 1.6e-06 56.6 138 31.2
Lj5A330G31 Lonicera japonica HOM05D000264 ORTHO05D000152 1.6e-06 56.6 135 40.0
Oeu032605.1 Olea europaea HOM05D000264 ORTHO05D000152 1.6e-06 56.6 76 42.1
Lj6A22T19 Lonicera japonica HOM05D000264 ORTHO05D000152 2.0e-06 56.2 75 41.3
PSO063G7633 Papaver somniferum HOM05D000264 ORTHO05D000152 2.0e-06 56.2 139 32.4
PSO832G2902 Papaver somniferum HOM05D000264 ORTHO05D000152 2.0e-06 56.2 144 31.9
vmacro12289 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 2.0e-06 56.2 126 28.6
Dinv29921 Davidia involucrata HOM05D000264 ORTHO05D000152 2.7e-06 55.8 132 33.3
Sabra11G0081400 Salix brachista HOM05D000264 ORTHO05D000152 2.7e-06 55.8 119 31.1
CSS0002232 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 3.5e-06 55.5 115 30.4
Lj6A655T45 Lonicera japonica HOM05D000264 ORTHO05D000152 3.5e-06 55.5 134 29.9
A03p33710 Brassica napus HOM05D000264 ORTHO05D000152 4.5e-06 55.1 114 28.1
BraA03t12545Z Brassica rapa HOM05D000264 ORTHO05D000152 4.5e-06 55.1 114 28.1
Lj6A2T20 Lonicera japonica HOM05D000264 ORTHO05D000152 4.5e-06 55.1 75 40.0
Prupe.4G203600 Prunus persica HOM05D000264 ORTHO05D000152 4.5e-06 55.1 132 28.0
Dinv44623 Davidia involucrata HOM05D000264 ORTHO05D000152 5.9e-06 54.7 120 27.5
Duzib177G0309 Durio zibethinus HOM05D000264 ORTHO05D000152 5.9e-06 54.7 129 30.2
FvH4_3g16140 Fragaria vesca HOM05D000264 ORTHO05D000152 5.9e-06 54.7 138 30.4
Oeu020735.1 Olea europaea HOM05D000264 ORTHO05D000152 5.9e-06 54.7 76 40.8
Potri.013G133400 Populus trichocarpa HOM05D000264 ORTHO05D000152 5.9e-06 54.7 113 31.9
Prupe.4G202900 Prunus persica HOM05D000264 ORTHO05D000152 5.9e-06 54.7 133 27.8
Rhsim04G0192800 Rhododendron simsii HOM05D000264 ORTHO05D000152 5.9e-06 54.7 93 33.3
GSVIVG01035671001 Vitis vinifera HOM05D000454 ORTHO05D002637 5.9e-06 54.7 76 38.2
C03p41010 Brassica napus HOM05D000264 ORTHO05D000152 7.7e-06 54.3 114 27.2
Cfa012319 Carpinus fangiana HOM05D000480 ORTHO05D000313 7.7e-06 54.3 118 33.1
Haze_08392 Corylus avellana HOM05D000480 ORTHO05D000313 7.7e-06 54.3 119 30.3
Lj3A788T32 Lonicera japonica HOM05D000264 ORTHO05D000152 7.7e-06 54.3 132 36.4
Prupe.4G203500 Prunus persica HOM05D000264 ORTHO05D000152 7.7e-06 54.3 133 27.8


User provided reference genes

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