Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 2.4e-96 355.5 181 100.0
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-62 243.0 185 71.9
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-51 205.3 115 91.3
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-50 203.4 115 90.4
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 9.8e-50 200.7 115 88.7
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 6.3e-49 198.0 115 88.7
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-47 193.7 115 87.0
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-44 182.2 105 89.5
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-43 180.6 107 87.9
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-42 176.8 103 86.4
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-41 173.7 210 53.8
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 3.5e-39 165.6 115 75.7
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 5.0e-38 161.8 115 72.2
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-37 160.2 111 75.7
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-37 159.5 189 54.0
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-37 159.1 197 52.3
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-36 156.8 197 51.8
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-36 156.8 197 51.8
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-36 155.6 197 51.8
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-35 152.1 192 53.1
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 5.8e-34 148.3 197 49.7
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 8.3e-33 144.4 115 69.6
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 3.0e-30 136.0 172 53.5
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 3.1e-27 125.9 146 52.1
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-25 120.6 110 60.9
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 5.4e-24 115.2 115 59.1
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-22 110.5 134 52.2
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.3e-22 110.5 167 42.5
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 1.5e-21 107.1 167 40.7
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-21 106.7 155 45.2
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 2.5e-21 106.3 180 41.7
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 7.3e-21 104.8 180 41.1
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 1.1e-19 100.9 167 40.7
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 1.2e-18 97.4 185 38.9
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 3.9e-14 82.4 96 47.9
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 1.2e-12 77.4 166 34.3
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-12 75.9 113 46.9
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 8.1e-12 74.7 96 46.9
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 1.1e-11 74.3 96 46.9
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 1.4e-11 73.9 96 42.7
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.8e-11 73.6 104 41.3
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.8e-11 73.6 104 41.3
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 1.8e-11 73.6 96 46.9
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 1.8e-11 73.6 168 31.5
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 2.4e-11 73.2 96 44.8
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 3.1e-11 72.8 97 42.3
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 5.2e-11 72.0 96 46.9
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 5.2e-11 72.0 99 42.4
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 6.8e-11 71.6 96 44.8
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 6.8e-11 71.6 96 44.8
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 6.8e-11 71.6 96 44.8
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 6.8e-11 71.6 96 44.8
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 6.8e-11 71.6 96 44.8
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 1.2e-10 70.9 96 45.8
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 2.6e-10 69.7 104 39.4
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 5.8e-10 68.6 96 45.8
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 5.8e-10 68.6 97 43.3
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 7.6e-10 68.2 99 42.4
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 9.9e-10 67.8 96 39.6
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.7e-09 67.0 96 42.7
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 2.9e-09 66.2 96 38.5
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 2.9e-09 66.2 96 45.8
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 2.9e-09 66.2 96 45.8
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 2.9e-09 66.2 96 40.6
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 2.9e-09 66.2 97 43.3
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 3.8e-09 65.9 98 41.8
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 3.8e-09 65.9 96 40.6
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 3.8e-09 65.9 98 42.9
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 4.9e-09 65.5 96 44.8
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 1.1e-08 64.3 102 37.3
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 1.1e-08 64.3 134 31.3
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 1.4e-08 63.9 96 39.6
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 1.9e-08 63.5 96 39.6
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.9e-08 63.5 86 45.3
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 1.9e-08 63.5 96 44.8
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 1.9e-08 63.5 96 41.7
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 2.4e-08 63.2 96 40.6
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 5.4e-08 62.0 96 39.6
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 7.1e-08 61.6 97 42.3
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 1.2e-07 60.8 80 45.0
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-07 60.5 80 46.2
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 2.7e-07 59.7 75 40.0
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 2.7e-07 59.7 77 45.5
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 2.7e-07 59.7 187 28.3
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 4.6e-07 58.9 104 36.5
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 7.8e-07 58.2 96 37.5
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 7.8e-07 58.2 75 40.0
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 1.0e-06 57.8 77 41.6
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.3e-06 57.4 96 37.5
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.7e-06 57.0 75 40.0
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.3e-06 56.6 75 40.0


User provided reference genes

Program Settings