Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 7.3e-95 350.5 173 100.0
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.8e-62 242.3 165 78.2
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 4.5e-60 235.0 165 77.0
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 2.3e-56 222.6 125 91.2
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-53 213.8 121 90.1
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 2.9e-51 205.7 135 80.0
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-50 202.6 132 80.3
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 5.5e-50 201.4 132 80.3
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 9.3e-50 200.7 132 80.3
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 7.9e-49 197.6 132 78.0
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-44 182.6 153 66.0
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-44 182.6 153 66.0
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 3.4e-44 182.2 132 73.5
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 4.5e-44 181.8 137 70.8
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 7.7e-44 181.0 153 65.4
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-43 179.9 137 69.3
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 3.8e-43 178.7 153 64.7
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 6.5e-43 177.9 137 70.1
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 6.5e-43 177.9 132 72.0
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-42 177.2 137 69.3
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 2.1e-41 172.9 135 68.1
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-41 172.2 137 67.9
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 8.8e-40 167.5 137 65.0
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-37 160.2 111 75.7
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-36 157.1 113 69.9
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 5.0e-35 151.8 116 68.1
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 4.2e-34 148.7 103 75.7
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-33 147.1 144 59.0
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 3.6e-33 145.6 116 65.5
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 6.1e-33 144.8 116 65.5
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 7.4e-31 137.9 116 64.7
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 2.2e-30 136.3 116 62.1
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 6.3e-30 134.8 116 63.8
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 1.5e-28 130.2 117 60.7
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-26 123.6 74 83.8
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-23 112.5 74 79.7
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 4.1e-21 105.5 140 45.0
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 5.3e-21 105.1 141 45.4
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 3.5e-20 102.4 136 42.6
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 1.0e-19 100.9 139 43.9
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 1.7e-19 100.1 141 44.7
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 2.9e-19 99.4 137 45.3
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 1.1e-18 97.4 139 41.7
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 3.2e-18 95.9 110 47.3
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 4.2e-18 95.5 133 42.1
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 7.2e-18 94.7 114 44.7
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 7.2e-18 94.7 141 40.4
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 9.4e-18 94.4 141 39.7
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.6e-17 93.6 143 38.5
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 3.6e-17 92.4 141 41.1
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 6.1e-17 91.7 147 38.1
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 8.0e-17 91.3 141 41.8
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 1.0e-16 90.9 118 44.1
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 1.8e-16 90.1 141 43.3
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 1.8e-16 90.1 141 40.4
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 2.3e-16 89.7 119 41.2
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 2.3e-16 89.7 119 41.2
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 3.0e-16 89.4 114 42.1
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 5.2e-16 88.6 142 38.7
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 5.2e-16 88.6 142 39.4
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 5.2e-16 88.6 135 42.2
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 6.8e-16 88.2 139 40.3
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 8.8e-16 87.8 152 36.2
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.2e-15 87.4 114 42.1
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 1.5e-15 87.0 142 38.7
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 1.5e-15 87.0 142 38.7
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 1.5e-15 87.0 142 38.7
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 1.5e-15 87.0 141 41.8
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 1.5e-15 87.0 114 41.2
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 1.5e-15 87.0 157 36.3
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 2.6e-15 86.3 141 41.8
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 2.6e-15 86.3 114 39.5
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 3.4e-15 85.9 142 38.0
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 3.4e-15 85.9 142 39.4
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 4.4e-15 85.5 142 38.0
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 4.4e-15 85.5 142 38.0
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 4.4e-15 85.5 142 38.0
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 4.4e-15 85.5 114 41.2
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 4.4e-15 85.5 114 42.1
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 2.2e-14 83.2 141 41.1
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 2.2e-14 83.2 129 39.5
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 3.7e-14 82.4 114 44.7
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 4.8e-14 82.0 120 44.2
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 6.3e-14 81.6 144 39.6
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 1.8e-13 80.1 129 38.8
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 5.4e-13 78.6 112 39.3
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 7.0e-13 78.2 152 37.5
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 9.1e-13 77.8 135 37.8
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.6e-12 77.0 143 36.4
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 1.6e-12 77.0 119 37.0
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 1.7e-11 73.6 141 36.9
Lsat_1_v5_gn_7_116000 Lactuca sativa HOM05D002887 ORTHO05D003159 4.7e-09 65.5 136 35.3
Zm00001eb199550 Zea mays HOM05D002887 ORTHO05D003159 1.4e-08 63.9 115 35.7
Sed0001540 Sechium edule HOM05D002887 ORTHO05D003159 3.0e-08 62.8 165 32.1
Sed0016468 Sechium edule HOM05D002887 ORTHO05D003159 3.0e-08 62.8 165 32.1
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-07 60.1 39 74.4
SEGI_36055 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 5.7e-07 58.5 112 33.0
Aqoxy6G01915 Aquilegia oxysepala HOM05D002887 ORTHO05D003159 1.7e-06 57.0 134 33.6
DCAR_022829 Daucus carota HOM05D002887 ORTHO05D003159 1.7e-06 57.0 115 33.9
MELO3C013321.2 Cucumis melo HOM05D002887 ORTHO05D003159 2.2e-06 56.6 103 36.9
MSTRG.19965 Avicennia marina HOM05D002887 ORTHO05D003159 2.8e-06 56.2 114 32.5
Actinidia37103 Actinidia chinensis HOM05D002887 ORTHO05D003159 8.3e-06 54.7 107 31.8


User provided reference genes

Program Settings