Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G447.4 Capsicum annuum HOM05D003181 ORTHO05D114890 2.8e-41 171.4 79 100.0
CAN.G447.6 Capsicum annuum HOM05D003181 ORTHO05D003689 3.7e-09 64.7 28 96.4
Sopen05g001010 Solanum pennellii HOM05D003181 ORTHO05D003689 4.0e-08 61.2 33 75.8
PGSC0003DMG400007679 Solanum tuberosum HOM05D003181 ORTHO05D003689 4.0e-08 61.2 33 75.8
Peaxi162Scf00128g00020 Petunia axillaris HOM05D003181 ORTHO05D003689 1.2e-07 59.7 33 72.7
Nitab4.5_0005364g0040 Nicotiana tabacum HOM05D003181 ORTHO05D003689 2.6e-07 58.5 33 72.7
Oeu014149.1 Olea europaea HOM05D003181 ORTHO05D003689 2.6e-07 58.5 33 66.7
Rhsim12G0112400 Rhododendron simsii HOM05D003181 ORTHO05D003689 3.4e-07 58.2 44 61.4
vmacro16210 Vaccinium macrocarpon HOM05D003181 ORTHO05D003689 3.4e-07 58.2 29 82.8
Nitab4.5_0000069g0310 Nicotiana tabacum HOM05D003181 ORTHO05D003689 4.5e-07 57.8 28 85.7
Nitab4.5_0002255g0080 Nicotiana tabacum HOM05D003181 ORTHO05D003689 5.8e-07 57.4 33 72.7
Nitab4.5_0002552g0010 Nicotiana tabacum HOM05D003181 ORTHO05D003689 5.8e-07 57.4 33 72.7
SGA_v2.0_scaffold63G21716 Striga asiatica HOM05D003181 ORTHO05D003689 5.8e-07 57.4 33 66.7
SGA_v2.0_scaffold87G27088 Striga asiatica HOM05D003181 ORTHO05D003689 5.8e-07 57.4 33 69.7
CSS0015245 Camellia sinensis var. sinensis HOM05D003181 ORTHO05D003689 1.7e-06 55.8 33 69.7
Migut.E00190 Erythranthe guttata HOM05D003181 ORTHO05D003689 1.7e-06 55.8 33 66.7
CAN.G282.60 Capsicum annuum HOM05D003181 ORTHO05D003689 2.9e-06 55.1 33 66.7
HanXRQChr17g0539721 Helianthus annuus HOM05D003181 ORTHO05D003689 3.8e-06 54.7 33 66.7
Ca_04583_v3 Cicer arietinum L. HOM05D003181 ORTHO05D003689 4.9e-06 54.3 40 55.0
Oeu038622.1 Olea europaea HOM05D003181 ORTHO05D003689 4.9e-06 54.3 33 66.7
Lalb_Chr09g0326211 Lupinus albus HOM05D003181 ORTHO05D003689 6.4e-06 53.9 28 75.0
PGSC0003DMG401016370 Solanum tuberosum HOM05D003181 ORTHO05D003689 6.4e-06 53.9 33 66.7
Actinidia15079 Actinidia chinensis HOM05D003181 ORTHO05D003689 8.4e-06 53.5 28 78.6
arahy.Tifrunner.gnm1.ann1.SV2VKR Arachis hypogaea HOM05D003181 ORTHO05D003689 8.4e-06 53.5 40 55.0
MSTRG.7917 Avicennia marina HOM05D003181 ORTHO05D003689 8.4e-06 53.5 33 63.6
Cc11_g15520 Coffea canephora HOM05D003181 ORTHO05D003689 8.4e-06 53.5 33 66.7
Lalb_Chr16g0382061 Lupinus albus HOM05D003181 ORTHO05D003689 8.4e-06 53.5 38 55.3
Oeu056722.1 Olea europaea HOM05D003181 ORTHO05D003689 8.4e-06 53.5 28 75.0


User provided reference genes

Program Settings