Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G445.2 Capsicum annuum HOM05D000023 ORTHO05D000014 7.3e-83 310.5 150 100.0
CAN.G46.29 Capsicum annuum HOM05D000023 ORTHO05D000014 1.9e-30 136.3 72 88.9
Solyc03g007510.4 Solanum lycopersicum HOM05D000023 ORTHO05D000014 1.6e-29 133.3 72 86.1
Sopen03g003470 Solanum pennellii HOM05D000023 ORTHO05D000014 1.6e-29 133.3 72 86.1
Nitab4.5_0000472g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 1.5e-27 126.7 72 84.7
Cc02_g02000 Coffea canephora HOM05D000023 ORTHO05D000014 4.0e-25 118.6 72 75.0
Sed0019091 Sechium edule HOM05D000023 ORTHO05D000014 1.3e-23 113.6 72 70.8
GSVIVG01028726001 Vitis vinifera HOM05D000023 ORTHO05D000014 1.7e-23 113.2 72 72.2
CsaV3_5G000770 Cucumis sativus L. HOM05D000023 ORTHO05D000014 2.2e-23 112.8 72 70.8
ClCG01G000670 Citrullus lanatus HOM05D000023 ORTHO05D000014 2.9e-23 112.5 72 70.8
Cpa.g.sc3.38 Carica papaya HOM05D000023 ORTHO05D000014 3.8e-23 112.1 72 69.4
Atru.chr1.286 Acer truncatum HOM05D000023 ORTHO05D000014 8.4e-23 110.9 72 70.8
Duzib205G1169 Durio zibethinus HOM05D000023 ORTHO05D000014 1.4e-22 110.2 72 68.1
QL09p011205 Quercus lobata HOM05D000023 ORTHO05D000014 1.4e-22 110.2 72 69.4
vmacro06584 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.4e-22 110.2 72 72.2
Nn1g01787 Nelumbo nucifera HOM05D000023 ORTHO05D000014 4.2e-22 108.6 72 68.1
TWI14G1170 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 4.2e-22 108.6 72 70.8
arahy.Tifrunner.gnm1.ann1.J9UGKB Arachis hypogaea HOM05D000023 ORTHO05D000014 5.5e-22 108.2 72 68.1
arahy.Tifrunner.gnm1.ann1.L964KV Arachis hypogaea HOM05D000023 ORTHO05D000014 5.5e-22 108.2 72 68.1
Sabra12G0022600 Salix brachista HOM05D000023 ORTHO05D000014 5.5e-22 108.2 72 68.1
CSS0012239 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.1e-22 107.8 72 68.1
CSS0036184 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.1e-22 107.8 72 68.1
MD01G1214000 Malus domestica HOM05D000023 ORTHO05D000014 9.3e-22 107.5 72 68.1
Rhsim03G0197500 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.3e-22 107.5 72 69.4
RcHm_v2.0_Chr1g0379971 Rosa chinensis HOM05D000023 ORTHO05D000014 1.2e-21 107.1 72 66.7
Psat5g080600 Pisum sativum HOM05D000023 ORTHO05D000014 2.1e-21 106.3 72 66.7
HanXRQChr05g0144091 Helianthus annuus HOM05D000023 ORTHO05D000014 4.6e-21 105.1 72 66.7
Aqoxy7G00206 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.3e-20 103.6 72 62.5
MSTRG.27051 Avicennia marina HOM05D000023 ORTHO05D000014 1.8e-20 103.2 71 66.2
Ca_16668_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 2.3e-20 102.8 72 65.3
MBI06_g04283_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 3.9e-20 102.1 72 63.9
Lalb_Chr08g0240691 Lupinus albus HOM05D000023 ORTHO05D000014 5.1e-20 101.7 76 59.2
FvH4_7g30891 Fragaria vesca HOM05D000023 ORTHO05D000014 6.7e-20 101.3 72 62.5
TPR.G26303 Trifolium pratense HOM05D000023 ORTHO05D000014 6.7e-20 101.3 72 65.3
CANSAT21G0690 Cannabis sativa HOM05D000023 ORTHO05D000014 3.3e-19 99.0 72 65.3
PGR042G0249 Punica granatum HOM05D000023 ORTHO05D000014 9.7e-19 97.4 72 62.5
SGA_v2.0_scaffold192G40592 Striga asiatica HOM05D000023 ORTHO05D000014 2.2e-18 96.3 70 58.6
EL10Ac3g05358 Beta vulgaris HOM05D000023 ORTHO05D000014 8.2e-18 94.4 72 63.9
Hund04822 Selenicereus undatus HOM05D000023 ORTHO05D000014 8.2e-18 94.4 72 63.9
PSO384G0268 Papaver somniferum HOM05D000023 ORTHO05D000014 1.8e-17 93.2 72 63.9
AL2G41820 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 5.3e-17 91.7 72 59.7
CARHR074680 Cardamine hirsuta HOM05D000023 ORTHO05D000014 5.3e-17 91.7 72 59.7
AUR62031479 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.2e-16 90.5 72 63.9
Lj1g0002954 Lotus japonicus HOM05D000023 ORTHO05D000014 1.2e-16 90.5 62 66.1
AT1G79740 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 2.6e-16 89.4 72 58.3
PSO135G0262 Papaver somniferum HOM05D000023 ORTHO05D000014 3.4e-16 89.0 72 61.1
THA.LOC104813544 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 5.9e-16 88.2 72 58.3
Ah.13g069770 Amaranthus hybridus HOM05D000023 ORTHO05D000014 3.8e-15 85.5 72 58.3
CAN.G1930.2 Capsicum annuum HOM05D000023 ORTHO05D000014 3.6e-13 79.0 47 76.6
HPP92_002832 Vanilla planifolia HOM05D000023 ORTHO05D000014 1.8e-12 76.6 72 55.6
Os01g0222700 Oryza sativa ssp. japonica HOM05D000023 ORTHO05D000014 1.9e-11 73.2 78 46.2
MBI07_g11399_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.0e-08 63.2 33 78.8
Peaxi162Scf00904g00461 Petunia axillaris HOM05D000023 ORTHO05D000014 1.4e-06 57.0 26 92.3


User provided reference genes

Program Settings