Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G44.2 Capsicum annuum HOM05D000278 ORTHO05D015036 5.0e-41 170.6 83 100.0
ClCG08G017540 Citrullus lanatus HOM05D000278 ORTHO05D004130 1.4e-27 125.9 75 81.3
CsaV3_2G025080 Cucumis sativus L. HOM05D000278 ORTHO05D004130 1.4e-27 125.9 75 81.3
Haze_12299 Corylus avellana HOM05D000278 ORTHO05D004130 1.8e-27 125.6 75 81.3
Oeu049171.1 Olea europaea HOM05D000278 ORTHO05D004130 1.8e-27 125.6 75 81.3
Lsat_1_v5_gn_8_155141 Lactuca sativa HOM05D000278 ORTHO05D004130 3.1e-27 124.8 75 80.0
Manes.12G019200 Manihot esculenta HOM05D000278 ORTHO05D004130 3.1e-27 124.8 75 80.0
Rhsim08G0045300 Rhododendron simsii HOM05D000278 ORTHO05D004130 3.1e-27 124.8 75 81.3
PGSC0003DMG401028572 Solanum tuberosum HOM05D000278 ORTHO05D004130 3.1e-27 124.8 75 80.0
SalBow8G2690 Salvia bowleyana HOM05D000278 ORTHO05D004130 4.1e-27 124.4 75 80.0
CSS0034236 Camellia sinensis var. sinensis HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
CAN.G371.65 Capsicum annuum HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Cpa.g.sc33.88 Carica papaya HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
MELO3C010705.2 Cucumis melo HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Dinv11027 Davidia involucrata HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Dinv14759 Davidia involucrata HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Manes.13G019600 Manihot esculenta HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Nitab4.5_0000041g0130 Nicotiana tabacum HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Nitab4.5_0012079g0010 Nicotiana tabacum HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Peaxi162Scf00128g00627 Petunia axillaris HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Phvul.001G256700 Phaseolus vulgaris HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 78.7
Sc04g0009780 Simmondsia chinensis HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Solyc05g013990.3 Solanum lycopersicum HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Sopen05g008940 Solanum pennellii HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
THA.LOC104825542 Tarenaya hassleriana HOM05D000278 ORTHO05D004130 5.3e-27 124.0 75 80.0
Actinidia15123 Actinidia chinensis HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 80.0
Actinidia37459 Actinidia chinensis HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 80.0
CiPaw.05G176300 Carya illinoinensis HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 78.7
Cc11_g16190 Coffea canephora HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 80.0
Eucgr.B03239 Eucalyptus grandis HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 78.7
Oeu004469.1 Olea europaea HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 80.0
Sed0010599 Sechium edule HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 78.7
TWI18G0594 Tripterygium wilfordii HOM05D000278 ORTHO05D004130 7.0e-27 123.6 75 78.7
Actinidia08112 Actinidia chinensis HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
MSTRG.13335 Avicennia marina HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
FvH4_5g28870 Fragaria vesca HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
FAN04G3081 Fragaria x ananassa HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
FAN08G2630 Fragaria x ananassa HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
FAN13G1794 Fragaria x ananassa HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
FAN18G3434 Fragaria x ananassa HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
Hma1.2p1_0079F.1_g041300 Hydrangea macrophylla HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
Hma1.2p1_0815F.1_g222810 Hydrangea macrophylla HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 77.3
Lsat_1_v5_gn_4_2661 Lactuca sativa HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 77.3
MD16G1106300 Malus domestica HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 78.7
Psat0s3108g0080 Pisum sativum HOM05D000278 ORTHO05D015036 9.1e-27 123.2 75 78.7
RcHm_v2.0_Chr4g0432301 Rosa chinensis HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
SalBow2G1192 Salvia bowleyana HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
Hund06050 Selenicereus undatus HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 80.0
unitig_22.g5528 Utricularia gibba HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 81.3
GSVIVG01000590001 Vitis vinifera HOM05D000278 ORTHO05D004130 9.1e-27 123.2 75 78.7
EL10As2g23192 Beta vulgaris HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Cfa009265 Carpinus fangiana HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
DCAR_007030 Daucus carota HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Duzib268G0205 Durio zibethinus HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
ECA234G0587 Erigeron canadensis HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Gohir.A01G157200 Gossypium hirsutum HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Gohir.D01G153200 Gossypium hirsutum HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Gohir.D12G150900 Gossypium hirsutum HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Gorai.002G189700 Gossypium raimondii HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Gorai.008G162400 Gossypium raimondii HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Lj6A817T55 Lonicera japonica HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Lj6g0014415 Lotus japonicus HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Medtr3g086330 Medicago truncatula HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 77.3
Psat5g092720 Pisum sativum HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 77.3
PGR102G1580 Punica granatum HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
QL03p056030 Quercus lobata HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
Thecc.02G267800 Theobroma cacao HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 78.7
TPR.G20618 Trifolium pratense HOM05D000278 ORTHO05D004130 1.2e-26 122.9 75 77.3
CAN.G658.3 Capsicum annuum HOM05D000278 ORTHO05D015036 1.6e-26 122.5 75 78.7
Ciclev10031191m.g Citrus clementina HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 78.7
Migut.K00638 Erythranthe guttata HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 78.7
Lalb_Chr01g0021371 Lupinus albus HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 77.3
Potri.008G182300 Populus trichocarpa HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 77.3
Prupe.1G240000 Prunus persica HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 78.7
Sabra08G0138800 Salix brachista HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 77.3
TWI75G1086 Tripterygium wilfordii HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 77.3
VMungo1383G1502 Vigna mungo HOM05D000278 ORTHO05D004130 1.6e-26 122.5 75 77.3
Ca_25126_v3 Cicer arietinum L. HOM05D000278 ORTHO05D004130 2.0e-26 122.1 75 77.3
Thhalv10007324m.g Eutrema salsugineum HOM05D000278 ORTHO05D004130 2.0e-26 122.1 75 77.3
HanXRQChr17g0569181 Helianthus annuus HOM05D000278 ORTHO05D004130 2.0e-26 122.1 75 76.0
MD13G1106100 Malus domestica HOM05D000278 ORTHO05D004130 2.0e-26 122.1 75 77.3
SEGI_03361 Sequoiadendron giganteum HOM05D000278 ORTHO05D004130 2.0e-26 122.1 75 77.3
Ah.03g133570 Amaranthus hybridus HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
CANSAT01G1557 Cannabis sativa HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 76.0
AUR62005529 Chenopodium quinoa HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
AUR62024208 Chenopodium quinoa HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
COL.COLO4_23539 Corchorus olitorius HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
Glyma.11G244700 Glycine max HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
Glyma.18G012400 Glycine max HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 77.3
Sabra10G0018400 Salix brachista HOM05D000278 ORTHO05D004130 2.6e-26 121.7 75 76.0
Aa31LG7G9530 Aethionema arabicum HOM05D000278 ORTHO05D004130 3.5e-26 121.3 75 77.3
BcaC05g26712 Brassica carinata HOM05D000278 ORTHO05D004130 3.5e-26 121.3 75 76.0
Gorai.009G334400 Gossypium raimondii HOM05D000278 ORTHO05D004130 3.5e-26 121.3 75 77.3
Lalb_Chr19g0127401 Lupinus albus HOM05D000278 ORTHO05D004130 3.5e-26 121.3 75 78.7
Potri.010G051700 Populus trichocarpa HOM05D000278 ORTHO05D004130 3.5e-26 121.3 75 76.0
Aa31LG4G12290 Aethionema arabicum HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 76.0
Aqoxy2G01992 Aquilegia oxysepala HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 77.3
MSTRG.7958 Avicennia marina HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
Carub.0002s1419 Capsella rubella HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 76.0
Duzib248G0682 Durio zibethinus HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 77.3
Migut.E00224 Erythranthe guttata HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 77.3
Nn3g16164 Nelumbo nucifera HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
Nn3g16624 Nelumbo nucifera HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
Nn4g22514 Nelumbo nucifera HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
Psat0s1548g0040 Pisum sativum HOM05D000278 ORTHO05D015036 4.5e-26 120.9 75 76.0
Hund25414 Selenicereus undatus HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
SGA_v2.0_scaffold87G27108 Striga asiatica HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
THA.LOC104807780 Tarenaya hassleriana HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 77.3
TAR622G1111 Trochodendron aralioides HOM05D000278 ORTHO05D004130 4.5e-26 120.9 75 78.7
Ah.02g130390 Amaranthus hybridus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 77.3
arahy.Tifrunner.gnm1.ann1.K5BW40 Arachis hypogaea HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 77.3
BcaB03g12057 Brassica carinata HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BcaB03g14007 Brassica carinata HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BcaC01g01645 Brassica carinata HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BcaC05g26520 Brassica carinata HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BcaC06g35255 Brassica carinata HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
A07p12210 Brassica napus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
A08p26570 Brassica napus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
A09p38830 Brassica napus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
C03p73450 Brassica napus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
C07p18170 Brassica napus HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BolC3t19640H Brassica oleracea HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BolC5t31296H Brassica oleracea HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BolC7t42328H Brassica oleracea HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BraA07t29005Z Brassica rapa HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
BraA09t39390Z Brassica rapa HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 76.0
GSVIVG01020856001 Vitis vinifera HOM05D000278 ORTHO05D004130 5.9e-26 120.6 75 77.3
Atru.chr11.2192 Acer truncatum HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 77.3
Aqoxy3G01361 Aquilegia oxysepala HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 77.3
Carub.0001s2560 Capsella rubella HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 76.0
CARHR026610 Cardamine hirsuta HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 76.0
Gohir.A05G311900 Gossypium hirsutum HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 76.0
Lalb_Chr03g0039791 Lupinus albus HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 78.7
MBI10_g17801_MAGBIO Magnolia biondii HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 77.3
HPP92_001208 Vanilla planifolia HOM05D000278 ORTHO05D004130 7.7e-26 120.2 75 77.3
AL1G40440 Arabidopsis lyrata HOM05D000278 ORTHO05D004130 1.0e-25 119.8 75 74.7
AT1G24510 Arabidopsis thaliana HOM05D000278 ORTHO05D004130 1.0e-25 119.8 75 74.7
Sp1g23280 Schrenkiella parvula HOM05D000278 ORTHO05D004130 1.0e-25 119.8 75 74.7
SMO339G0030 Selaginella moellendorffii HOM05D000278 ORTHO05D004130 1.0e-25 119.8 75 77.3
arahy.Tifrunner.gnm1.ann1.W00XVX Arachis hypogaea HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 76.0
C05p25680 Brassica napus HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 76.0
Gohir.D05G312900 Gossypium hirsutum HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 76.0
Mapoly0051s0088 Marchantia polymorpha HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 77.3
TAR374G0849 Trochodendron aralioides HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 77.3
TAR629G3233 Trochodendron aralioides HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 77.3
Zm00001eb298950 Zea mays HOM05D000278 ORTHO05D004130 1.3e-25 119.4 75 77.3
Gohir.A12G146300 Gossypium hirsutum HOM05D000278 ORTHO05D004130 1.7e-25 119.0 75 77.3
PSO017G1560 Papaver somniferum HOM05D000278 ORTHO05D004130 1.7e-25 119.0 75 77.3
PSO478G4577 Papaver somniferum HOM05D000278 ORTHO05D004130 1.7e-25 119.0 75 77.3
Zm00001eb118030 Zea mays HOM05D000278 ORTHO05D004130 1.7e-25 119.0 75 77.3
CDE02G0970 Ceratophyllum demersum HOM05D000278 ORTHO05D004130 2.2e-25 118.6 75 76.0
Os06g0562600 Oryza sativa ssp. japonica HOM05D000278 ORTHO05D004130 2.2e-25 118.6 75 76.0
CDE09G0295 Ceratophyllum demersum HOM05D000278 ORTHO05D004130 5.0e-25 117.5 75 74.7
ATR0824G281 Amborella trichopoda HOM05D000278 ORTHO05D004130 6.5e-25 117.1 75 76.0
Aqoxy3G00663 Aquilegia oxysepala HOM05D000278 ORTHO05D004130 6.5e-25 117.1 75 76.0
Pp3c20_23570 Physcomitrium patens HOM05D000278 ORTHO05D004130 1.5e-24 115.9 75 74.7
Thhalv10019724m.g Eutrema salsugineum HOM05D000278 ORTHO05D004130 1.2e-23 112.8 74 71.6
vmacro16157 Vaccinium macrocarpon HOM05D000278 ORTHO05D004130 1.6e-23 112.5 96 63.5
CBR_g40771 Chara braunii HOM05D000278 ORTHO05D004130 2.1e-23 112.1 75 70.7
PRCOL_00003659 Prasinoderma coloniale HOM05D000278 ORTHO05D004130 4.7e-23 110.9 75 70.7
Psat4g058240 Pisum sativum HOM05D000278 ORTHO05D015036 2.3e-22 108.6 69 73.9
Psat0s3066g0200 Pisum sativum HOM05D000278 ORTHO05D015036 2.6e-21 105.1 69 72.5
Psat0s3066g0320 Pisum sativum HOM05D000278 ORTHO05D015036 2.6e-21 105.1 69 72.5
MCO07G493 Micromonas commoda HOM05D000278 ORTHO05D004130 4.4e-21 104.4 75 65.3
Haze_26958 Corylus avellana HOM05D000278 ORTHO05D004130 3.7e-20 101.3 75 61.3
Psat5g136880 Pisum sativum HOM05D000278 ORTHO05D015036 4.8e-20 100.9 81 63.0
GSVIVG01025705001 Vitis vinifera HOM05D000278 ORTHO05D015036 7.0e-19 97.1 81 61.7
Cre03.g156750 Chlamydomonas reinhardtii HOM05D000278 ORTHO05D004130 2.0e-18 95.5 75 58.7
Psat2g113120 Pisum sativum HOM05D000278 ORTHO05D015036 2.7e-18 95.1 71 63.4
Cfa001637 Carpinus fangiana HOM05D000278 ORTHO05D004130 1.0e-17 93.2 71 59.2
Lj3C1063G7 Lonicera japonica HOM05D000278 ORTHO05D004130 3.0e-14 81.6 55 69.1
PSO541G5146 Papaver somniferum HOM05D000278 ORTHO05D015036 7.0e-11 70.5 78 52.6
Psat1g051040 Pisum sativum HOM05D000278 ORTHO05D015036 1.6e-10 69.3 40 80.0
CAN.G629.1 Capsicum annuum HOM05D000278 ORTHO05D004130 1.7e-09 65.9 74 51.4
HanXRQChr16g0504091 Helianthus annuus HOM05D000278 ORTHO05D036348 6.5e-09 63.9 43 67.4
Psat2g105960 Pisum sativum HOM05D000610 ORTHO05D037361 8.5e-09 63.5 40 75.0
Solyc04g045410.3 Solanum lycopersicum HOM05D000278 ORTHO05D004130 1.9e-08 62.4 75 49.3


User provided reference genes

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