Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 9.5e-253 876.3 432 100.0
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 5.9e-162 574.7 382 75.7
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.0e-161 573.9 382 75.4
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.1e-122 443.4 279 77.1
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.5e-114 416.0 377 56.5
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.1e-112 411.0 358 62.0
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.6e-111 407.1 367 56.7
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.8e-111 405.6 369 56.4
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 5.3e-110 402.1 306 68.3
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 4.9e-108 395.6 364 55.8
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 6.9e-102 375.2 451 47.2
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.9e-97 359.4 500 43.2
CAN.G437.9 Capsicum annuum HOM05D003575 ORTHO05D003587 1.5e-67 261.2 162 81.5
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 5.5e-67 259.2 387 39.5
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.4e-65 254.6 390 38.7
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 2.6e-64 250.4 361 39.3
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 3.4e-64 250.0 375 38.1
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 9.8e-64 248.4 376 38.8
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 2.8e-63 246.9 391 37.6
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 4.1e-62 243.0 372 37.6
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.6e-61 241.1 374 38.0
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.9e-60 236.9 370 36.8
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.9e-60 236.9 370 36.5
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 3.2e-59 233.4 379 35.9
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.7e-58 230.3 359 35.9
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 4.7e-58 229.6 364 38.2
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 4.7e-58 229.6 375 37.6
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 5.2e-57 226.1 409 33.7
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 2.0e-56 224.2 381 38.8
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.7e-55 221.1 370 36.2
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 3.7e-55 219.9 385 34.8
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 4.9e-55 219.5 370 35.4
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 6.3e-55 219.2 372 34.4
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 6.3e-55 219.2 378 35.2
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 1.1e-54 218.4 374 35.0
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.1e-54 218.4 383 35.8
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 2.4e-54 217.2 385 33.5
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 2.4e-54 217.2 378 36.8
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.1e-54 216.5 383 34.2
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 5.4e-54 216.1 360 37.2
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 9.1e-54 215.3 372 34.1
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 9.1e-54 215.3 372 34.1
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.6e-53 214.5 364 34.1
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.5e-53 213.4 374 35.6
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 3.5e-53 213.4 368 36.1
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 4.5e-53 213.0 364 34.1
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 2.9e-52 210.3 366 33.9
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.5e-51 208.0 352 36.1
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 1.9e-51 207.6 375 33.9
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 4.2e-51 206.5 372 33.6
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 6.1e-50 202.6 348 34.5
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.8e-49 201.1 306 37.9
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 2.3e-49 200.7 388 34.0
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 8.9e-49 198.7 371 31.5
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 1.5e-48 198.0 362 32.3
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 2.0e-48 197.6 387 33.6
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.0e-48 197.6 363 34.2
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 2.6e-48 197.2 360 36.1
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.4e-48 196.8 368 33.7
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 4.4e-48 196.4 311 34.1
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 4.4e-48 196.4 373 33.2
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 1.3e-47 194.9 363 32.5
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 2.9e-47 193.7 377 33.7
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 2.9e-47 193.7 394 32.2
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 3.7e-47 193.4 358 33.0
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.8e-46 191.0 358 35.2
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 3.2e-46 190.3 354 32.2
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 4.1e-46 189.9 364 33.5
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 1.2e-45 188.3 367 33.5
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.0e-45 187.6 179 51.4
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.7e-44 184.5 300 35.7
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 1.7e-44 184.5 349 33.8
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 1.7e-44 184.5 378 33.6
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 2.3e-44 184.1 368 32.6
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 3.9e-44 183.3 363 30.6
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 1.6e-42 177.9 377 32.4
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.6e-42 176.8 379 31.9
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.2e-40 171.8 402 31.1
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 1.2e-40 171.8 373 30.8
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.5e-40 171.4 403 30.0
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.5e-40 171.4 402 31.3
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 1.3e-39 168.3 380 30.0
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 2.9e-39 167.2 296 35.1
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-38 164.9 384 29.4
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 1.4e-38 164.9 404 28.7
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 9.2e-38 162.2 381 29.4
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.2e-38 162.2 381 29.4
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 1.2e-37 161.8 297 31.6
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-37 161.8 345 33.6
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-37 161.0 345 33.6
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 2.7e-37 160.6 352 31.0
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 4.6e-37 159.8 406 28.1
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.3e-35 153.7 372 27.2
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 5.6e-35 152.9 381 30.7
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 1.2e-34 151.8 182 45.6
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 1.6e-34 151.4 415 28.7
CAN.G437.8 Capsicum annuum HOM05D003575 ORTHO05D003587 1.8e-33 147.9 94 81.9
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.8e-33 147.9 535 24.3
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 4.0e-33 146.7 336 28.0
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 4.0e-33 146.7 345 28.4
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 3.4e-32 143.7 273 33.7
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 4.4e-32 143.3 381 28.9
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-31 141.7 402 26.6
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-30 138.3 429 25.9
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-29 134.8 326 28.5
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.1e-29 134.4 308 31.5
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.0e-28 130.6 366 26.0
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 8.6e-28 129.0 150 44.7
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.9e-27 127.9 355 29.3
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 9.5e-27 125.6 155 48.4
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 9.5e-27 125.6 320 26.6
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 2.8e-26 124.0 350 28.0
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 5.2e-25 119.8 160 42.5
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 5.2e-25 119.8 297 30.6
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 8.9e-25 119.0 145 40.7
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 9.9e-24 115.5 362 25.4
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 3.2e-22 110.5 281 30.2
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 2.7e-21 107.5 155 39.4
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 3.5e-21 107.1 133 36.8
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 4.6e-21 106.7 167 34.1
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 1.0e-20 105.5 158 38.6
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.0e-20 105.5 158 38.6
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-20 104.8 158 38.0
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-20 104.4 158 38.0
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 2.3e-20 104.4 134 38.8
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 4.3e-19 100.1 143 35.0
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 5.6e-19 99.8 157 39.5
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 1.6e-18 98.2 170 34.7
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 8.1e-18 95.9 138 32.6
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 8.1e-18 95.9 171 31.0
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 1.1e-17 95.5 170 28.8
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 1.1e-17 95.5 135 32.6
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 2.4e-17 94.4 138 31.9
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 2.4e-17 94.4 138 31.9
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 2.4e-17 94.4 125 36.0
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 3.1e-17 94.0 138 31.9
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 8.9e-17 92.4 171 28.7
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 1.5e-16 91.7 134 32.1
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-16 91.3 115 38.3
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 3.4e-16 90.5 135 34.1
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 3.4e-16 90.5 135 34.1
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 7.6e-16 89.4 171 28.1
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 1.3e-15 88.6 143 34.3
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.3e-15 88.6 138 37.7
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 1.7e-15 88.2 126 38.1
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-15 87.8 115 36.5
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 4.9e-15 86.7 115 35.7
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 4.9e-15 86.7 165 27.3
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 1.9e-14 84.7 128 31.2
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-14 84.7 115 35.7
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 9.3e-14 82.4 113 40.7
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.6e-13 81.6 87 48.3
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-13 81.6 103 35.9
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.5e-13 80.5 161 29.2
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.8e-13 79.3 100 40.0
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 7.8e-13 79.3 135 28.1
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 7.8e-13 79.3 115 32.2
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.7e-12 78.2 145 31.0
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 3.9e-12 77.0 115 31.3
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.7e-12 75.9 221 27.6
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-11 74.7 115 31.3
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 5.6e-11 73.2 100 39.0
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 5.6e-11 73.2 109 37.6
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 7.3e-11 72.8 88 38.6
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.1e-10 71.2 94 37.2
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 3.6e-10 70.5 137 32.8
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 1.8e-09 68.2 127 27.6
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 4.0e-09 67.0 93 36.6
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 4.0e-09 67.0 93 36.6
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 5.3e-09 66.6 84 42.9
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 6.9e-09 66.2 76 43.4
Pp3c24_6860 Physcomitrium patens HOM05D003575 ORTHO05D003587 2.0e-08 64.7 131 31.3
Mapoly0033s0032 Marchantia polymorpha HOM05D003575 ORTHO05D003587 3.4e-08 63.9 104 29.8
Atru.chr6.3410 Acer truncatum HOM05D000074 ORTHO05D008782 1.3e-07 62.0 64 50.0
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 1.3e-07 62.0 73 41.1
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 2.2e-07 61.2 76 44.7
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 1.9e-06 58.2 75 34.7
SalBow6G1357 Salvia bowleyana HOM05D003575 ORTHO05D003587 9.3e-06 55.8 59 45.8


User provided reference genes

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