Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.9e-110 402.5 207 100.0
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 2.2e-53 213.0 110 98.2
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 5.2e-47 191.8 108 90.7
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 5.2e-47 191.8 108 90.7
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 2.8e-45 186.0 108 88.0
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.4e-44 183.7 108 87.0
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 5.4e-44 181.8 108 87.0
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 4.5e-43 178.7 108 86.1
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 1.1e-41 174.1 108 81.5
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.5e-41 173.7 134 70.9
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.0e-39 167.5 108 81.5
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 1.4e-39 167.2 108 79.6
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.4e-39 167.2 108 79.6
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.8e-39 166.8 108 79.6
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 1.8e-39 166.8 108 78.7
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 4.0e-39 165.6 108 78.7
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 5.2e-39 165.2 108 75.9
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 5.2e-39 165.2 108 77.8
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.8e-39 164.9 108 78.7
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 8.9e-39 164.5 121 70.2
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 8.9e-39 164.5 108 79.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 1.2e-38 164.1 108 75.9
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 1.2e-38 164.1 108 76.9
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 3.4e-38 162.5 108 76.9
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 3.4e-38 162.5 108 76.9
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 4.4e-38 162.2 108 76.9
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 4.4e-38 162.2 108 75.9
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 5.8e-38 161.8 108 75.0
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 7.5e-38 161.4 108 75.0
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 9.8e-38 161.0 108 75.9
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 9.8e-38 161.0 108 75.9
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 9.8e-38 161.0 108 76.9
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.3e-37 160.6 108 76.9
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.7e-37 160.2 106 76.4
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.7e-37 160.2 108 72.2
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.2e-37 159.8 118 72.9
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.2e-37 159.8 108 75.0
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.2e-37 159.8 108 74.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 2.2e-37 159.8 108 74.1
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 2.9e-37 159.5 108 76.9
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 3.7e-37 159.1 108 74.1
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 4.9e-37 158.7 108 74.1
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 4.9e-37 158.7 106 74.5
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.9e-37 158.7 108 75.0
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 6.4e-37 158.3 108 73.1
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.4e-36 157.1 108 75.0
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.9e-36 156.8 108 73.1
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.9e-36 156.8 108 73.1
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 2.4e-36 156.4 108 75.9
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.4e-36 156.4 108 71.3
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.4e-36 156.4 108 71.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.4e-36 156.4 108 70.4
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 2.4e-36 156.4 108 75.9
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 3.2e-36 156.0 108 75.0
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 3.2e-36 156.0 108 74.1
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 3.2e-36 156.0 108 74.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 3.2e-36 156.0 108 71.3
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 3.2e-36 156.0 108 71.3
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 5.4e-36 155.2 108 74.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 5.4e-36 155.2 108 74.1
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.2e-35 154.1 108 72.2
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.6e-35 153.7 108 73.1
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 2.0e-35 153.3 108 72.2
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.5e-35 152.5 108 72.2
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 4.6e-35 152.1 108 69.4
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.6e-35 152.1 108 73.1
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.6e-35 152.1 108 73.1
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 4.6e-35 152.1 108 73.1
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 6.0e-35 151.8 108 72.2
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 6.0e-35 151.8 108 73.1
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.3e-34 150.6 106 73.6
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 1.7e-34 150.2 108 71.3
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 3.9e-34 149.1 108 70.4
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 5.0e-34 148.7 108 71.3
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.6e-34 148.3 108 69.4
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 6.6e-34 148.3 108 71.3
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 6.6e-34 148.3 108 71.3
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 6.6e-34 148.3 108 69.4
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 8.6e-34 147.9 108 69.4
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 8.6e-34 147.9 108 71.3
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 1.5e-33 147.1 108 69.4
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.9e-33 146.7 108 70.4
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 4.3e-33 145.6 108 67.6
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 5.6e-33 145.2 107 70.1
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 9.5e-33 144.4 106 70.8
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.2e-32 144.1 105 70.5
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-32 144.1 136 59.6
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 1.2e-32 144.1 136 59.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 3.6e-32 142.5 108 65.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 6.2e-32 141.7 108 68.5
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 1.8e-31 140.2 108 67.6
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 3.1e-31 139.4 108 67.6
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 5.2e-31 138.7 106 66.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 1.2e-30 137.5 107 64.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-29 134.0 134 57.5
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.2e-29 133.3 108 69.4
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 3.7e-29 132.5 108 69.4
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.1e-28 131.0 106 68.9
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.2e-28 129.4 107 63.6
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 7.0e-28 128.3 106 64.2
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 9.2e-28 127.9 108 63.9
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.0e-26 124.4 85 71.8
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.3e-26 123.2 107 60.7
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 6.6e-26 121.7 108 65.7
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 3.3e-25 119.4 105 59.0
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 1.6e-24 117.1 74 79.7
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.8e-24 116.3 108 60.2
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.1e-20 104.4 110 58.2
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 1.9e-20 103.6 68 77.9
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.4e-20 103.2 87 63.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-18 97.4 73 71.2
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 2.3e-18 96.7 73 69.9
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 5.1e-18 95.5 123 47.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 6.6e-18 95.1 68 72.1
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 7.3e-17 91.7 112 50.0
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 8.4e-13 78.2 101 41.6
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 2.5e-09 66.6 111 40.5
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 8.1e-08 61.6 95 34.7
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 6.9e-07 58.5 40 75.0


User provided reference genes

Program Settings