Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G430.2 Capsicum annuum HOM05D003900 ORTHO05D005009 1.3e-73 279.6 137 100.0
CAN.G78.130 Capsicum annuum HOM05D003900 ORTHO05D005009 1.3e-54 216.5 126 85.7
CAN.G853.45 Capsicum annuum HOM05D003900 ORTHO05D005009 4.9e-54 214.5 126 86.5
CAN.G1005.1 Capsicum annuum HOM05D003900 ORTHO05D005009 3.5e-52 208.4 137 79.6
PGSC0003DMG400000195 Solanum tuberosum HOM05D003900 ORTHO05D005009 1.4e-45 186.4 124 75.8
Sopen01g038900 Solanum pennellii HOM05D003900 ORTHO05D005009 1.9e-45 186.0 125 76.0
Solyc01g095110.4 Solanum lycopersicum HOM05D003900 ORTHO05D005009 5.5e-45 184.5 125 75.2
Nitab4.5_0010695g0010 Nicotiana tabacum HOM05D003900 ORTHO05D005009 6.3e-41 171.0 118 72.0
Peaxi162Scf00020g00155 Petunia axillaris HOM05D003900 ORTHO05D005009 6.3e-41 171.0 126 68.3
Nitab4.5_0000915g0110 Nicotiana tabacum HOM05D003900 ORTHO05D005009 2.4e-40 169.1 118 72.0
Cc02_g38560 Coffea canephora HOM05D003900 ORTHO05D005009 5.5e-29 131.3 121 56.2
CAN.G609.3 Capsicum annuum HOM05D003900 ORTHO05D005009 3.6e-28 128.6 81 79.0
Atru.chr5.563 Acer truncatum HOM05D003900 ORTHO05D005009 1.1e-26 123.6 123 50.4
Dinv43863 Davidia involucrata HOM05D003900 ORTHO05D005009 2.6e-26 122.5 122 52.5
Atru.chr5.581 Acer truncatum HOM05D003900 ORTHO05D005009 5.7e-26 121.3 123 49.6
CSS0000093 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 1.7e-25 119.8 123 48.0
CSS0016355 Camellia sinensis var. sinensis HOM05D003900 ORTHO05D005009 1.7e-25 119.8 123 48.0
Rhsim07G0010500 Rhododendron simsii HOM05D003900 ORTHO05D005009 4.1e-24 115.2 123 47.2
CAN.G874.71 Capsicum annuum HOM05D003900 ORTHO05D005009 5.3e-24 114.8 64 89.1
Thhalv10001319m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 7.0e-24 114.4 117 50.4
QL04p055515 Quercus lobata HOM05D003900 ORTHO05D005009 9.1e-24 114.0 116 50.9
THA.LOC104817316 Tarenaya hassleriana HOM05D003900 ORTHO05D005009 1.2e-23 113.6 123 48.0
Thecc.01G352500 Theobroma cacao HOM05D003900 ORTHO05D005009 2.6e-23 112.5 123 47.2
CAN.G460.4 Capsicum annuum HOM05D003900 ORTHO05D005009 4.5e-23 111.7 64 85.9
Gohir.D12G110200 Gossypium hirsutum HOM05D003900 ORTHO05D005009 5.9e-23 111.3 132 46.2
Gorai.008G119500 Gossypium raimondii HOM05D003900 ORTHO05D005009 7.7e-23 110.9 132 45.5
Manes.01G252300 Manihot esculenta HOM05D003900 ORTHO05D005009 1.7e-22 109.8 124 46.8
GSVIVG01026966001 Vitis vinifera HOM05D003900 ORTHO05D005009 2.2e-22 109.4 118 47.5
CiPaw.01G067500 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.9e-22 109.0 122 45.9
Gohir.A12G106900 Gossypium hirsutum HOM05D003900 ORTHO05D005009 3.8e-22 108.6 131 45.8
COL.COLO4_12777 Corchorus olitorius HOM05D003900 ORTHO05D005009 5.0e-22 108.2 123 46.3
vmacro13229 Vaccinium macrocarpon HOM05D003900 ORTHO05D005009 1.5e-21 106.7 120 46.7
CiPaw.01G067200 Carya illinoinensis HOM05D003900 ORTHO05D005009 2.5e-21 105.9 129 43.4
Aa31LG1G27520 Aethionema arabicum HOM05D003900 ORTHO05D005009 3.2e-21 105.5 116 48.3
Haze_15564 Corylus avellana HOM05D003900 ORTHO05D005009 3.2e-21 105.5 125 44.8
Sp4g28170 Schrenkiella parvula HOM05D003900 ORTHO05D005009 5.5e-21 104.8 115 47.0
Duzib138G1643 Durio zibethinus HOM05D003900 ORTHO05D005009 7.2e-21 104.4 131 44.3
CARHR171850 Cardamine hirsuta HOM05D003900 ORTHO05D005009 9.4e-21 104.0 117 47.9
Duzib133G1046 Durio zibethinus HOM05D003900 ORTHO05D005009 1.2e-20 103.6 122 43.4
CANSAT56G3111 Cannabis sativa HOM05D003900 ORTHO05D005009 1.6e-20 103.2 124 45.2
CiPaw.01G066800 Carya illinoinensis HOM05D003900 ORTHO05D005009 1.6e-20 103.2 129 41.9
Migut.B01798 Erythranthe guttata HOM05D003900 ORTHO05D005009 2.1e-20 102.8 115 48.7
CARHR141390 Cardamine hirsuta HOM05D003900 ORTHO05D005009 3.6e-20 102.1 115 46.1
CiPaw.01G067300 Carya illinoinensis HOM05D003900 ORTHO05D005009 4.7e-20 101.7 129 41.9
SalBow3G3666 Salvia bowleyana HOM05D003900 ORTHO05D005009 4.7e-20 101.7 115 46.1
CiPaw.01G066600 Carya illinoinensis HOM05D003900 ORTHO05D005009 6.1e-20 101.3 129 41.1
Thhalv10022571m.g Eutrema salsugineum HOM05D003900 ORTHO05D005009 8.0e-20 100.9 128 43.0
TWI23G0979 Tripterygium wilfordii HOM05D003900 ORTHO05D005009 1.8e-19 99.8 125 44.8
SGA_v2.0_scaffold4G02283 Striga asiatica HOM05D003900 ORTHO05D005009 2.3e-19 99.4 115 46.1
Lj7C507T1 Lonicera japonica HOM05D003900 ORTHO05D005009 5.2e-19 98.2 120 44.2
AT3G61520 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.8e-19 97.8 117 45.3
AT5G28370 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.8e-19 97.8 117 46.2
AT5G28460 Arabidopsis thaliana HOM05D003900 ORTHO05D005009 6.8e-19 97.8 117 46.2
Ciclev10019067m.g Citrus clementina HOM05D003900 ORTHO05D005009 6.8e-19 97.8 121 46.3
CiPaw.01G067100 Carya illinoinensis HOM05D003900 ORTHO05D005009 8.8e-19 97.4 125 40.0
CiPaw.01G067400 Carya illinoinensis HOM05D003900 ORTHO05D005009 8.8e-19 97.4 129 41.9
AL5G43880 Arabidopsis lyrata HOM05D003900 ORTHO05D005009 1.2e-18 97.1 117 45.3
Carub.0005s2821 Capsella rubella HOM05D003900 ORTHO05D005009 2.0e-18 96.3 117 44.4
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 2.6e-18 95.9 119 43.7
Aa31LG10G15460 Aethionema arabicum HOM05D003900 ORTHO05D005009 4.4e-18 95.1 123 43.9
Manes.05G029400 Manihot esculenta HOM05D003900 ORTHO05D005009 1.3e-17 93.6 120 41.7
MD07G1131300 Malus domestica HOM05D003900 ORTHO05D005009 8.3e-17 90.9 118 42.4
Prupe.2G177500 Prunus persica HOM05D003900 ORTHO05D005009 1.1e-16 90.5 118 43.2
Ah.15g096610 Amaranthus hybridus HOM05D003900 ORTHO05D005009 3.1e-16 89.0 127 40.2
Cfa003873 Carpinus fangiana HOM05D003900 ORTHO05D005009 4.1e-16 88.6 132 40.2
TAR629G0263 Trochodendron aralioides HOM05D003900 ORTHO05D005009 7.0e-16 87.8 119 40.3
BcaC08g45129 Brassica carinata HOM05D003900 ORTHO05D005009 1.2e-15 87.0 123 42.3
BraA07t30195Z Brassica rapa HOM05D003900 ORTHO05D005009 1.2e-15 87.0 128 41.4
A07p25540 Brassica napus HOM05D003900 ORTHO05D005009 1.6e-15 86.7 128 40.6
Potri.014G090400 Populus trichocarpa HOM05D003900 ORTHO05D005009 2.0e-15 86.3 126 38.1
AUR62004412 Chenopodium quinoa HOM05D003900 ORTHO05D005009 4.5e-15 85.1 119 36.1
Phvul.002G326200 Phaseolus vulgaris HOM05D003900 ORTHO05D005009 7.7e-15 84.3 125 37.6
C06p27530 Brassica napus HOM05D003900 ORTHO05D005009 1.0e-14 84.0 123 41.5
BolC6t37920H Brassica oleracea HOM05D003900 ORTHO05D005009 1.3e-14 83.6 123 40.7
RcHm_v2.0_Chr1g0357681 Rosa chinensis HOM05D003900 ORTHO05D005009 1.3e-14 83.6 117 41.0
Sabra14G0065500 Salix brachista HOM05D003900 ORTHO05D005009 1.3e-14 83.6 126 36.5
RcHm_v2.0_Chr3g0468501 Rosa chinensis HOM05D003900 ORTHO05D005009 2.2e-14 82.8 117 39.3
Lj4g0005982 Lotus japonicus HOM05D003900 ORTHO05D005009 5.0e-14 81.6 124 41.1
EL10Ac1g00355 Beta vulgaris HOM05D003900 ORTHO05D005009 6.5e-14 81.3 116 39.7
BcaB02g07375 Brassica carinata HOM05D003900 ORTHO05D005009 8.5e-14 80.9 123 39.8
CAN.G1417.4 Capsicum annuum HOM05D003900 ORTHO05D005009 8.5e-14 80.9 125 43.2
FAN04G0755 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.5e-14 80.9 123 35.8
FvH4_7g15360 Fragaria vesca HOM05D003900 ORTHO05D005009 1.1e-13 80.5 124 37.1
FAN06G2614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.1e-13 80.5 124 37.1
FAN06G4981 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.1e-13 80.5 124 37.1
Sc01g0003220 Simmondsia chinensis HOM05D003900 ORTHO05D005009 1.1e-13 80.5 118 36.4
Actinidia20162 Actinidia chinensis HOM05D003900 ORTHO05D005009 1.5e-13 80.1 64 56.2
RcHm_v2.0_Chr7g0228211 Rosa chinensis HOM05D003900 ORTHO05D005009 1.9e-13 79.7 117 39.3
DCAR_025213 Daucus carota HOM05D003900 ORTHO05D005009 5.5e-13 78.2 127 33.1
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 5.5e-13 78.2 123 35.0
MD01G1071400 Malus domestica HOM05D003900 ORTHO05D005009 5.5e-13 78.2 88 45.5
VMungo0251G1173 Vigna mungo HOM05D003900 ORTHO05D005009 5.5e-13 78.2 128 35.2
Aqoxy7G01955 Aquilegia oxysepala HOM05D003900 ORTHO05D005009 7.2e-13 77.8 120 39.2
HanXRQChr04g0120801 Helianthus annuus HOM05D003900 ORTHO05D005009 7.2e-13 77.8 136 36.0
Oeu015216.1 Olea europaea HOM05D003900 ORTHO05D005009 7.2e-13 77.8 71 54.9
arahy.Tifrunner.gnm1.ann1.U9H0N8 Arachis hypogaea HOM05D003900 ORTHO05D005009 9.4e-13 77.4 120 40.0
FAN03G2211 Fragaria x ananassa HOM05D003900 ORTHO05D005009 9.4e-13 77.4 124 37.1
FAN10G3614 Fragaria x ananassa HOM05D003900 ORTHO05D005009 9.4e-13 77.4 124 37.1
PGR142G0969 Punica granatum HOM05D003900 ORTHO05D005009 1.2e-12 77.0 96 42.7
CAN.G1129.41 Capsicum annuum HOM05D003900 ORTHO05D005009 2.1e-12 76.3 97 45.4
Sed0017189 Sechium edule HOM05D003900 ORTHO05D005009 2.1e-12 76.3 73 49.3
arahy.Tifrunner.gnm1.ann1.K45FBX Arachis hypogaea HOM05D003900 ORTHO05D005009 2.7e-12 75.9 121 38.8
AUR62022618 Chenopodium quinoa HOM05D003900 ORTHO05D005009 2.7e-12 75.9 119 36.1
Nn1g01685 Nelumbo nucifera HOM05D003900 ORTHO05D005009 2.7e-12 75.9 116 35.3
Eucgr.E00097 Eucalyptus grandis HOM05D003900 ORTHO05D005009 4.0e-11 72.0 122 33.6
Dinv32521 Davidia involucrata HOM05D003900 ORTHO05D005009 5.2e-11 71.6 64 51.6
ClCG09G009150 Citrullus lanatus HOM05D003900 ORTHO05D005009 3.4e-10 68.9 76 44.7
MBI11_g19575_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 9.8e-10 67.4 115 33.0
FvH4_5g03011 Fragaria vesca HOM05D003900 ORTHO05D005009 2.2e-09 66.2 118 33.1
MBI11_g19576_MAGBIO Magnolia biondii HOM05D003900 ORTHO05D005009 3.7e-09 65.5 115 31.3
VMungo0251G0997 Vigna mungo HOM05D003900 ORTHO05D005009 6.3e-09 64.7 78 38.5
FAN01G0431 Fragaria x ananassa HOM05D003900 ORTHO05D005009 8.3e-09 64.3 87 37.9
CsaV3_7G025780 Cucumis sativus L. HOM05D003900 ORTHO05D005009 1.1e-08 63.9 73 42.5
MELO3C029134.2 Cucumis melo HOM05D003900 ORTHO05D005009 5.4e-08 61.6 77 40.3
Lalb_Chr04g0259301 Lupinus albus HOM05D003900 ORTHO05D005009 3.5e-07 58.9 112 33.9
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 5.9e-07 58.2 69 42.0
FAN06G0440 Fragaria x ananassa HOM05D003900 ORTHO05D005009 1.7e-06 56.6 73 39.7


User provided reference genes

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