Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G423.40 Capsicum annuum HOM05D002319 ORTHO05D002374 1.4e-105 386.3 196 100.0
CAN.G841.11 Capsicum annuum HOM05D002319 ORTHO05D002374 1.3e-34 150.6 424 32.5
Solyc10g083190.3 Solanum lycopersicum HOM05D002319 ORTHO05D002374 6.2e-34 148.3 420 32.6
Sopen10g032670 Solanum pennellii HOM05D002319 ORTHO05D002374 1.8e-33 146.7 420 32.4
PGSC0003DMG400028158 Solanum tuberosum HOM05D002319 ORTHO05D002374 5.3e-33 145.2 420 32.1
Peaxi162Scf00096g01114 Petunia axillaris HOM05D002319 ORTHO05D002374 8.7e-28 127.9 81 79.0
Nitab4.5_0013218g0010 Nicotiana tabacum HOM05D002319 ORTHO05D002374 1.1e-25 120.9 81 76.5
Nitab4.5_0001801g0040 Nicotiana tabacum HOM05D002319 ORTHO05D002374 3.1e-25 119.4 81 76.5
Psat3g030800 Pisum sativum HOM05D002319 ORTHO05D002374 2.9e-15 86.3 74 56.8
Dinv31730 Davidia involucrata HOM05D002319 ORTHO05D002374 3.8e-15 85.9 108 51.9
Dinv21153 Davidia involucrata HOM05D002319 ORTHO05D002374 5.0e-15 85.5 108 51.9
Rhsim04G0129700 Rhododendron simsii HOM05D002319 ORTHO05D002374 5.0e-15 85.5 91 51.6
Actinidia06165 Actinidia chinensis HOM05D002319 ORTHO05D002374 8.5e-15 84.7 108 52.8
Oeu007206.2 Olea europaea HOM05D002319 ORTHO05D002374 1.4e-14 84.0 105 51.4
Cc06_g06280 Coffea canephora HOM05D002319 ORTHO05D002374 1.9e-14 83.6 108 51.9
MSTRG.19285 Avicennia marina HOM05D002319 ORTHO05D002374 2.5e-14 83.2 125 40.8
TAR623G0514 Trochodendron aralioides HOM05D002319 ORTHO05D002374 2.5e-14 83.2 103 45.6
Hma1.2p1_1724F.1_g299420 Hydrangea macrophylla HOM05D002319 ORTHO05D002374 3.2e-14 82.8 108 50.0
Actinidia07912 Actinidia chinensis HOM05D002319 ORTHO05D002374 4.2e-14 82.4 108 51.9
arahy.Tifrunner.gnm1.ann1.5JT16E Arachis hypogaea HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 50.0
arahy.Tifrunner.gnm1.ann1.EMDZ87 Arachis hypogaea HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 50.0
MSTRG.26620 Avicennia marina HOM05D002319 ORTHO05D002374 7.2e-14 81.6 193 35.8
Cfa016653 Carpinus fangiana HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 49.1
CiPaw.10G013300 Carya illinoinensis HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 50.0
Haze_19663 Corylus avellana HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 49.1
Lj1g0025805 Lotus japonicus HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 50.0
VMungo1383G1918 Vigna mungo HOM05D002319 ORTHO05D002374 7.2e-14 81.6 108 50.0
Ca_09033_v3 Cicer arietinum L. HOM05D002319 ORTHO05D002374 9.4e-14 81.3 116 44.0
Medtr7g105430 Medicago truncatula HOM05D002319 ORTHO05D002374 9.4e-14 81.3 108 50.0
Cpa.g.sc104.85 Carica papaya HOM05D002319 ORTHO05D002374 1.2e-13 80.9 108 48.1
HanXRQChr04g0119651 Helianthus annuus HOM05D002319 ORTHO05D002374 1.2e-13 80.9 108 48.1
Thecc.05G097100 Theobroma cacao HOM05D002319 ORTHO05D002374 1.2e-13 80.9 105 49.5
GSVIVG01033905001 Vitis vinifera HOM05D002319 ORTHO05D002374 1.2e-13 80.9 108 49.1
ClCG10G018640 Citrullus lanatus HOM05D002319 ORTHO05D002374 1.6e-13 80.5 108 49.1
Gohir.A04G060700 Gossypium hirsutum HOM05D002319 ORTHO05D002374 1.6e-13 80.5 108 49.1
Gohir.D04G095900 Gossypium hirsutum HOM05D002319 ORTHO05D002374 1.6e-13 80.5 108 49.1
Gorai.009G398800 Gossypium raimondii HOM05D002319 ORTHO05D002374 1.6e-13 80.5 108 49.1
vmacro08842 Vaccinium macrocarpon HOM05D002319 ORTHO05D002374 1.6e-13 80.5 108 50.0
CsaV3_3G037590 Cucumis sativus L. HOM05D002319 ORTHO05D002374 2.7e-13 79.7 108 48.1
Glyma.19G196800 Glycine max HOM05D002319 ORTHO05D002374 2.7e-13 79.7 108 48.1
Lj2C145T7 Lonicera japonica HOM05D002319 ORTHO05D002374 2.7e-13 79.7 108 50.0
Oeu009301.1 Olea europaea HOM05D002319 ORTHO05D002374 3.6e-13 79.3 105 49.5
Phvul.001G193300 Phaseolus vulgaris HOM05D002319 ORTHO05D002374 3.6e-13 79.3 108 49.1
QL07p038003 Quercus lobata HOM05D002319 ORTHO05D002374 3.6e-13 79.3 108 48.1
QL93p1999_0036 Quercus lobata HOM05D002319 ORTHO05D002374 3.6e-13 79.3 108 48.1
TPR.G23357 Trifolium pratense HOM05D002319 ORTHO05D002374 4.6e-13 79.0 80 50.0
CANSAT64G1671 Cannabis sativa HOM05D002319 ORTHO05D002374 6.1e-13 78.6 108 48.1
MELO3C009502.2 Cucumis melo HOM05D002319 ORTHO05D002374 6.1e-13 78.6 108 48.1
FAN02G0757 Fragaria x ananassa HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 49.1
FAN02G3312 Fragaria x ananassa HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 49.1
FAN14G2633 Fragaria x ananassa HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 49.1
Glyma.03G199500 Glycine max HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 48.1
Prupe.7G100300 Prunus persica HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 48.1
SalBow1G5493 Salvia bowleyana HOM05D002319 ORTHO05D002374 7.9e-13 78.2 108 48.1
CSS0017230 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 1.0e-12 77.8 109 50.5
Duzib093G1299 Durio zibethinus HOM05D002319 ORTHO05D002374 1.0e-12 77.8 108 48.1
ECA238G0086 Erigeron canadensis HOM05D002319 ORTHO05D002374 1.0e-12 77.8 108 46.3
Migut.L01809 Erythranthe guttata HOM05D002319 ORTHO05D002374 1.0e-12 77.8 105 48.6
Hma1.2p1_0245F.1_g101560 Hydrangea macrophylla HOM05D002319 ORTHO05D002374 1.0e-12 77.8 83 54.2
BraA03t12879Z Brassica rapa HOM05D002319 ORTHO05D002374 1.4e-12 77.4 99 51.5
FAN09G1971 Fragaria x ananassa HOM05D002319 ORTHO05D002374 1.4e-12 77.4 110 48.2
Manes.09G051100 Manihot esculenta HOM05D002319 ORTHO05D002374 1.4e-12 77.4 108 47.2
BcaB06g25604 Brassica carinata HOM05D002319 ORTHO05D002374 2.3e-12 76.6 104 50.0
BcaC05g29351 Brassica carinata HOM05D002319 ORTHO05D002374 2.3e-12 76.6 101 50.5
A05p37740 Brassica napus HOM05D002319 ORTHO05D002374 2.3e-12 76.6 101 50.5
C05p56340 Brassica napus HOM05D002319 ORTHO05D002374 2.3e-12 76.6 101 50.5
BolC5t34298H Brassica oleracea HOM05D002319 ORTHO05D002374 2.3e-12 76.6 101 50.5
BraA05t22569Z Brassica rapa HOM05D002319 ORTHO05D002374 2.3e-12 76.6 101 50.5
FvH4_6g19640 Fragaria vesca HOM05D002319 ORTHO05D002374 2.3e-12 76.6 108 48.1
SalBow1G2522 Salvia bowleyana HOM05D002319 ORTHO05D002374 2.3e-12 76.6 108 47.2
Sp3g09830 Schrenkiella parvula HOM05D002319 ORTHO05D002374 2.3e-12 76.6 104 50.0
Ah.08g210280 Amaranthus hybridus HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 47.2
AL3G23140 Arabidopsis lyrata HOM05D002319 ORTHO05D002374 3.0e-12 76.3 104 50.0
AT3G11590 Arabidopsis thaliana HOM05D002319 ORTHO05D002374 3.0e-12 76.3 104 50.0
Carub.0003s1091 Capsella rubella HOM05D002319 ORTHO05D002374 3.0e-12 76.3 104 50.0
CARHR086140 Cardamine hirsuta HOM05D002319 ORTHO05D002374 3.0e-12 76.3 104 50.0
Thhalv10020297m.g Eutrema salsugineum HOM05D002319 ORTHO05D002374 3.0e-12 76.3 104 50.0
HanXRQChr04g0100281 Helianthus annuus HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
Nn6g34794 Nelumbo nucifera HOM05D002319 ORTHO05D002374 3.0e-12 76.3 73 49.3
Potri.006G207800 Populus trichocarpa HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
Potri.016G074300 Populus trichocarpa HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
RcHm_v2.0_Chr3g0474981 Rosa chinensis HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 48.1
Sabra06G0159900 Salix brachista HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
Sabra16G0076900 Salix brachista HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
Sabra16G0080000 Salix brachista HOM05D002319 ORTHO05D002374 3.0e-12 76.3 108 46.3
FAN05G0934 Fragaria x ananassa HOM05D002319 ORTHO05D002374 5.1e-12 75.5 105 48.6
Lsat_1_v5_gn_2_54721 Lactuca sativa HOM05D002319 ORTHO05D002374 5.1e-12 75.5 108 44.4
Aa31LG3G4980 Aethionema arabicum HOM05D002319 ORTHO05D002374 6.7e-12 75.1 104 48.1
Ciclev10011212m.g Citrus clementina HOM05D002319 ORTHO05D002374 6.7e-12 75.1 108 48.1
FAN05G0858 Fragaria x ananassa HOM05D002319 ORTHO05D002374 6.7e-12 75.1 108 48.1
DCAR_020731 Daucus carota HOM05D002319 ORTHO05D002374 8.8e-12 74.7 108 46.3
Lalb_Chr20g0111531 Lupinus albus HOM05D002319 ORTHO05D002374 8.8e-12 74.7 108 48.1
MD12G1032300 Malus domestica HOM05D002319 ORTHO05D002374 8.8e-12 74.7 83 47.0
PGR142G1754 Punica granatum HOM05D002319 ORTHO05D002374 8.8e-12 74.7 108 46.3
THA.LOC104816606 Tarenaya hassleriana HOM05D002319 ORTHO05D002374 8.8e-12 74.7 108 46.3
SalBow5G4975 Salvia bowleyana HOM05D002319 ORTHO05D002374 1.1e-11 74.3 113 46.9
Duzib128G1692 Durio zibethinus HOM05D002319 ORTHO05D002374 1.5e-11 73.9 105 45.7
MD14G1032400 Malus domestica HOM05D002319 ORTHO05D002374 2.0e-11 73.6 108 45.4
Hund03887 Selenicereus undatus HOM05D002319 ORTHO05D002374 2.0e-11 73.6 108 46.3
Sc20g0006510 Simmondsia chinensis HOM05D002319 ORTHO05D002374 2.0e-11 73.6 108 47.2
MSTRG.5874 Avicennia marina HOM05D002319 ORTHO05D002374 3.3e-11 72.8 146 41.1
EL10Ac7g16832 Beta vulgaris HOM05D002319 ORTHO05D002374 3.3e-11 72.8 134 41.8
BcaB04g18651 Brassica carinata HOM05D002319 ORTHO05D002374 4.3e-11 72.4 110 46.4
AUR62028494 Chenopodium quinoa HOM05D002319 ORTHO05D002374 4.3e-11 72.4 108 46.3
AUR62028500 Chenopodium quinoa HOM05D002319 ORTHO05D002374 4.3e-11 72.4 108 46.3
Eucgr.A02622 Eucalyptus grandis HOM05D002319 ORTHO05D002374 7.4e-11 71.6 108 46.3
Hund19878 Selenicereus undatus HOM05D002319 ORTHO05D002374 7.4e-11 71.6 148 37.2
Manes.08G029400 Manihot esculenta HOM05D002319 ORTHO05D002374 1.3e-10 70.9 108 44.4
Migut.J00666 Erythranthe guttata HOM05D002319 ORTHO05D002374 2.2e-10 70.1 96 47.9
BcaC01g04101 Brassica carinata HOM05D002319 ORTHO05D002374 6.3e-10 68.6 98 48.0
A03p37200 Brassica napus HOM05D002319 ORTHO05D002374 6.3e-10 68.6 95 47.4
AUR62006251 Chenopodium quinoa HOM05D002319 ORTHO05D002374 6.3e-10 68.6 63 60.3
Duzib106G1473 Durio zibethinus HOM05D002319 ORTHO05D002374 8.2e-10 68.2 83 49.4
TWI77G0898 Tripterygium wilfordii HOM05D002319 ORTHO05D002374 8.2e-10 68.2 108 43.5
C03p45060 Brassica napus HOM05D002319 ORTHO05D002374 1.1e-09 67.8 95 48.4
BolC3t16767H Brassica oleracea HOM05D002319 ORTHO05D002374 1.1e-09 67.8 95 48.4
Sed0015904 Sechium edule HOM05D002319 ORTHO05D002374 2.4e-09 66.6 68 54.4
DCAR_013420 Daucus carota HOM05D002319 ORTHO05D002374 3.1e-09 66.2 82 53.7
TAR636G1826 Trochodendron aralioides HOM05D002319 ORTHO05D002374 4.1e-09 65.9 138 31.2
TWI53G1033 Tripterygium wilfordii HOM05D002319 ORTHO05D002374 5.3e-09 65.5 150 37.3
TAR633G1586 Trochodendron aralioides HOM05D002319 ORTHO05D002374 2.6e-08 63.2 95 37.9
MBI07_g42012_MAGBIO Magnolia biondii HOM05D002319 ORTHO05D002374 5.9e-08 62.0 137 29.2
MBI11_g23194_MAGBIO Magnolia biondii HOM05D002319 ORTHO05D002374 5.9e-08 62.0 93 37.6
Actinidia07263 Actinidia chinensis HOM05D002319 ORTHO05D002374 7.7e-08 61.6 69 50.7
PSO837G0005 Papaver somniferum HOM05D002319 ORTHO05D002374 2.9e-07 59.7 64 50.0
unitig_578.g16370 Utricularia gibba HOM05D002319 ORTHO05D002374 2.9e-07 59.7 150 32.0
PSO017G0972 Papaver somniferum HOM05D002319 ORTHO05D002374 3.8e-07 59.3 64 50.0
GSVIVG01036076001 Vitis vinifera HOM05D002319 ORTHO05D002374 5.0e-07 58.9 80 45.0
CSS0020708 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 6.5e-07 58.5 69 47.8
CSS0043220 Camellia sinensis var. sinensis HOM05D002319 ORTHO05D002374 6.5e-07 58.5 69 47.8
Cpa.g.sc195.33 Carica papaya HOM05D002319 ORTHO05D002374 1.4e-06 57.4 64 48.4
CiPaw.13G132800 Carya illinoinensis HOM05D002319 ORTHO05D002374 4.2e-06 55.8 64 48.4
QL01p011779 Quercus lobata HOM05D002319 ORTHO05D002374 9.4e-06 54.7 84 40.5


User provided reference genes

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