Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G419.24 Capsicum annuum HOM05D002907 ORTHO05D005554 1.4e-78 296.2 147 100.0
CAN.G181.47 Capsicum annuum HOM05D002907 ORTHO05D005554 3.4e-53 211.8 119 89.9
CAN.G542.11 Capsicum annuum HOM05D002907 ORTHO05D005554 4.1e-38 161.8 108 77.8
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 1.9e-11 73.2 56 67.9
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 7.3e-11 71.2 56 66.1
Solyc02g014340.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 6.1e-10 68.2 79 50.6
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 6.1e-10 68.2 56 67.9
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 6.1e-10 68.2 56 67.9
CAN.G25.7 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-09 67.4 43 83.7
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 1.4e-09 67.0 60 56.7
CAN.G660.34 Capsicum annuum HOM05D002907 ORTHO05D005554 5.8e-08 61.6 42 78.6
Nitab4.5_0001916g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.8e-08 61.6 64 50.0
CAN.G1342.3 Capsicum annuum HOM05D001433 ORTHO05D005554 2.9e-07 59.3 88 40.9
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.3e-07 57.8 49 57.1
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.1e-06 57.4 68 45.6
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 1.4e-06 57.0 56 55.4
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.4e-06 57.0 42 69.0
Solyc06g034070.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.4e-06 57.0 42 66.7
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 1.4e-06 57.0 42 66.7
Solyc09g150120.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.4e-06 56.2 43 65.1
Ciclev10030532m.g Citrus clementina HOM05D003635 ORTHO05D004283 3.2e-06 55.8 31 80.6
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 4.1e-06 55.5 42 64.3
SGA_v2.0_scaffold364G49990 Striga asiatica HOM05D003635 ORTHO05D004283 4.1e-06 55.5 31 77.4
Atru.chr12.571 Acer truncatum HOM05D003635 ORTHO05D004283 7.0e-06 54.7 31 77.4
Aa31LG10G9870 Aethionema arabicum HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
Ah.09g234270 Amaranthus hybridus HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
EL10Ac2g03470 Beta vulgaris HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
AUR62022537 Chenopodium quinoa HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
AUR62035965 Chenopodium quinoa HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
AUR62044277 Chenopodium quinoa HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
Eucgr.J01165 Eucalyptus grandis HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
Hund19994 Selenicereus undatus HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2
Sc06g0001910 Simmondsia chinensis HOM05D003635 ORTHO05D004283 9.2e-06 54.3 31 74.2


User provided reference genes

Program Settings