Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 7.4e-53 210.3 109 100.0
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 1.0e-30 136.7 110 72.7
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 8.8e-30 133.7 113 69.9
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 5.7e-29 131.0 113 68.1
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 1.3e-28 129.8 113 67.3
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 2.3e-25 119.0 100 72.0
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 2.1e-23 112.5 110 55.5
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.6e-21 105.5 77 72.7
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 2.6e-21 105.5 90 61.1
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 7.5e-21 104.0 97 57.7
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 4.9e-20 101.3 105 51.4
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 1.1e-19 100.1 107 56.1
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 1.1e-19 100.1 107 56.1
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 1.8e-19 99.4 111 53.2
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 2.4e-19 99.0 118 46.6
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.2e-18 96.7 102 48.0
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 2.0e-18 95.9 108 49.1
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 1.0e-17 93.6 110 50.9
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.3e-17 93.2 110 45.5
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 1.7e-17 92.8 67 61.2
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 2.3e-17 92.4 108 54.6
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 3.8e-17 91.7 111 48.6
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 3.8e-17 91.7 107 51.4
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 5.0e-17 91.3 113 50.4
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 5.0e-17 91.3 123 46.3
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 5.0e-17 91.3 105 51.4
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 6.6e-17 90.9 93 54.8
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 6.6e-17 90.9 107 50.5
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 8.6e-17 90.5 108 52.8
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 8.6e-17 90.5 93 50.5
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 8.6e-17 90.5 111 49.5
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 8.6e-17 90.5 93 54.8
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 8.6e-17 90.5 111 49.5
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 8.6e-17 90.5 106 44.3
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 8.6e-17 90.5 108 50.0
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 1.1e-16 90.1 114 48.2
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 1.1e-16 90.1 112 44.6
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 1.5e-16 89.7 115 48.7
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 1.5e-16 89.7 112 49.1
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 1.5e-16 89.7 113 49.6
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.5e-16 89.7 114 50.0
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 1.9e-16 89.4 113 48.7
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.9e-16 89.4 112 49.1
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 1.9e-16 89.4 120 46.7
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 1.9e-16 89.4 66 62.1
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 2.5e-16 89.0 116 50.0
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 2.5e-16 89.0 113 48.7
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 3.3e-16 88.6 101 53.5
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 3.3e-16 88.6 113 49.6
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 3.3e-16 88.6 119 47.9
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 4.3e-16 88.2 97 48.5
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 4.3e-16 88.2 105 52.4
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 4.3e-16 88.2 112 48.2
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 4.3e-16 88.2 112 48.2
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 5.6e-16 87.8 113 50.4
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 5.6e-16 87.8 96 52.1
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 7.3e-16 87.4 90 54.4
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 7.3e-16 87.4 114 49.1
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 7.3e-16 87.4 93 50.5
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 9.5e-16 87.0 106 49.1
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 9.5e-16 87.0 95 50.5
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 9.5e-16 87.0 96 49.0
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 1.2e-15 86.7 108 48.1
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.2e-15 86.7 87 54.0
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 1.6e-15 86.3 111 45.0
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 1.6e-15 86.3 51 70.6
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 1.6e-15 86.3 96 51.0
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 2.8e-15 85.5 105 46.7
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 3.6e-15 85.1 65 63.1
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 3.6e-15 85.1 108 44.4
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 3.6e-15 85.1 67 59.7
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 4.7e-15 84.7 87 50.6
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 4.7e-15 84.7 111 46.8
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 8.0e-15 84.0 50 74.0
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.0e-14 83.6 108 44.4
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 2.3e-14 82.4 96 45.8
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 2.3e-14 82.4 96 45.8
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 2.3e-14 82.4 112 45.5
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 3.0e-14 82.0 105 45.7
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 3.0e-14 82.0 70 55.7
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.0e-14 81.6 95 47.4
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 4.0e-14 81.6 75 54.7
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 4.0e-14 81.6 87 52.9
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 6.8e-14 80.9 63 57.1
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 8.9e-14 80.5 96 44.8
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 8.9e-14 80.5 68 55.9
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 1.2e-13 80.1 62 56.5
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 1.2e-13 80.1 106 45.3
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 1.2e-13 80.1 106 45.3
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 2.0e-13 79.3 70 54.3
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 4.4e-13 78.2 101 47.5
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 7.5e-13 77.4 69 53.6
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 9.8e-13 77.0 58 63.8
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 1.3e-12 76.6 113 39.8
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 4.9e-12 74.7 113 40.7
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 2.0e-10 69.3 39 82.1
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 2.7e-10 68.9 92 48.9
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 2.7e-10 68.9 92 48.9
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 2.7e-10 68.9 99 42.4
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 4.6e-10 68.2 62 53.2
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 4.6e-10 68.2 63 50.8
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 6.0e-10 67.8 106 45.3
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 6.0e-10 67.8 62 58.1
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 5.0e-09 64.7 94 39.4
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 1.1e-08 63.5 85 47.1
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 2.5e-08 62.4 101 38.6
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 5.6e-08 61.2 54 55.6
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 7.3e-08 60.8 82 43.9
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 2.1e-07 59.3 43 60.5
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 3.6e-07 58.5 44 68.2
Pp3c3_11690 Physcomitrium patens HOM05D006906 ORTHO05D008578 8.0e-07 57.4 84 41.7
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 5.2e-06 54.7 50 62.0


User provided reference genes

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