Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 1.8e-204 715.7 363 100.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 1.6e-163 579.7 328 89.6
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 6.5e-162 574.3 328 89.0
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 1.9e-153 546.2 323 85.4
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.2e-152 543.5 323 84.8
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 6.5e-146 521.2 354 77.1
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 9.5e-137 490.7 328 74.7
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 4.4e-134 481.9 331 73.4
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.3e-133 480.3 328 73.5
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 2.9e-133 479.2 328 73.8
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 2.0e-131 473.0 328 72.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 1.7e-130 469.9 327 73.4
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.5e-129 466.1 310 74.8
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 7.3e-129 464.5 328 71.0
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.2e-128 463.8 328 71.0
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.6e-128 462.2 328 71.6
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 3.1e-127 459.1 328 71.6
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 5.2e-127 458.4 323 70.3
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 5.2e-127 458.4 328 69.8
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 2.0e-126 456.4 328 69.5
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.4e-126 455.3 328 69.8
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.3e-125 453.8 328 69.5
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 2.9e-125 452.6 328 70.1
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 3.7e-125 452.2 328 69.8
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 6.4e-125 451.4 329 69.9
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 1.4e-124 450.3 328 68.9
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 3.2e-124 449.1 335 66.9
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 4.1e-124 448.7 328 69.8
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 5.4e-124 448.4 328 67.4
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 5.4e-124 448.4 328 69.5
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 5.4e-124 448.4 331 70.4
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 9.2e-124 447.6 318 70.4
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-123 447.2 330 69.1
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 1.2e-123 447.2 335 68.4
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.6e-123 446.8 328 68.9
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 3.5e-123 445.7 328 68.0
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 4.6e-123 445.3 353 66.0
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 6.0e-123 444.9 328 68.6
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 1.9e-121 439.9 328 68.0
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 2.5e-121 439.5 328 68.0
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 7.3e-121 438.0 328 68.9
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 7.3e-121 438.0 328 68.0
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 9.5e-121 437.6 328 67.4
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.1e-120 436.4 328 68.6
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 8.1e-120 434.5 326 66.9
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 1.8e-119 433.3 330 66.1
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 3.1e-119 432.6 328 66.8
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 3.1e-119 432.6 321 66.0
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 5.2e-119 431.8 328 66.5
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 5.2e-119 431.8 330 66.1
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 5.2e-119 431.8 323 66.3
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 5.2e-119 431.8 328 67.4
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 6.8e-119 431.4 327 66.7
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 6.8e-119 431.4 333 65.8
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 8.9e-119 431.0 322 66.1
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 8.9e-119 431.0 328 66.2
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.5e-118 430.3 333 65.8
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 1.5e-118 430.3 350 64.3
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.5e-118 430.3 310 68.4
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 3.4e-118 429.1 328 66.5
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 3.4e-118 429.1 328 65.5
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 5.8e-118 428.3 332 66.0
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 5.8e-118 428.3 329 68.1
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 7.5e-118 427.9 327 66.1
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 9.9e-118 427.6 309 68.9
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 2.2e-117 426.4 328 65.5
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 1.4e-116 423.7 330 67.3
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 1.9e-116 423.3 332 64.8
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 3.2e-116 422.5 310 67.7
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 5.4e-116 421.8 323 66.9
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.6e-115 420.2 324 64.8
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.1e-115 419.9 329 65.0
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 2.7e-115 419.5 328 64.0
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 1.3e-114 417.2 332 63.9
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 1.7e-114 416.8 329 65.3
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 3.9e-114 415.6 330 63.9
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 8.6e-114 414.5 328 63.1
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.5e-113 413.7 330 63.6
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 1.5e-113 413.7 328 63.1
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 2.5e-113 412.9 328 63.1
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 5.6e-113 411.8 329 64.1
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.2e-112 410.6 327 63.0
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 2.1e-112 409.8 328 64.0
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.1e-112 409.8 328 64.0
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.1e-112 409.8 328 64.0
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 2.1e-112 409.8 328 64.0
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 3.6e-112 409.1 329 64.1
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.4e-111 407.1 329 65.0
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 1.4e-111 407.1 353 62.6
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 3.1e-111 406.0 332 62.3
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 4.0e-111 405.6 335 63.9
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 2.2e-109 399.8 334 62.3
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 1.6e-107 393.7 329 61.4
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 7.8e-107 391.3 328 63.7
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 3.3e-105 386.0 209 91.4
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.3e-105 385.6 230 84.3
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 4.7e-104 382.1 290 68.3
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.4e-103 379.8 392 54.8
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 1.9e-100 370.2 327 60.2
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.2e-99 367.5 260 69.2
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 2.7e-99 366.3 332 59.3
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 4.6e-99 365.5 280 66.1
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 1.0e-98 364.4 327 59.3
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.5e-94 350.5 241 73.4
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 4.5e-94 349.0 239 72.8
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 7.1e-92 341.7 292 62.3
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 9.3e-92 341.3 335 55.5
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 2.8e-88 329.7 311 52.7
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 5.5e-84 315.5 331 48.9
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 1.8e-82 310.5 312 49.7
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 2.3e-82 310.1 315 49.2
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 8.4e-77 291.6 328 51.8
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 3.6e-67 259.6 268 50.4
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 1.4e-63 247.7 177 71.8
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 1.1e-57 228.0 318 41.2
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 6.7e-50 202.2 180 60.0
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 8.5e-45 185.3 157 58.6
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-38 164.5 204 47.1
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 2.0e-33 147.5 277 35.0
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 1.1e-31 141.7 99 71.7
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.2e-30 138.3 113 61.1
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.1e-27 127.5 102 60.8
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 6.8e-18 95.9 107 43.9
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 9.8e-17 92.0 62 67.7
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 8.3e-16 89.0 93 45.2
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 4.4e-09 66.6 39 82.1
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 6.0e-06 56.2 58 44.8


User provided reference genes

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