Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G411.60 Capsicum annuum HOM05D008010 ORTHO05D010085 1.1e-131 473.4 260 100.0
Nitab4.5_0002185g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 5.2e-105 384.8 260 83.5
Nitab4.5_0008462g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 2.2e-103 379.4 257 82.9
Sopen02g021240 Solanum pennellii HOM05D008010 ORTHO05D010085 7.1e-102 374.4 260 82.7
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 8.1e-90 334.3 226 83.6
Solyc02g072260.4 Solanum lycopersicum HOM05D008010 ORTHO05D010085 1.5e-88 330.1 226 83.2
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 3.1e-81 305.8 226 79.2
Dinv12764 Davidia involucrata HOM05D008010 ORTHO05D010085 8.8e-44 181.4 258 52.3
GSVIVG01021245001 Vitis vinifera HOM05D008010 ORTHO05D010085 2.3e-36 156.8 259 46.7
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 2.4e-25 120.2 274 39.1
Nn3g21124 Nelumbo nucifera HOM05D008010 ORTHO05D010085 5.4e-25 119.0 258 42.2
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 3.5e-24 116.3 250 40.4
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 3.5e-24 116.3 221 42.5
Potri.011G069300 Populus trichocarpa HOM05D008010 ORTHO05D010085 1.0e-23 114.8 168 48.8
Sabra11G0057100 Salix brachista HOM05D008010 ORTHO05D010085 1.3e-23 114.4 211 43.6
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 4.3e-22 109.4 229 41.5
Eucgr.D00477 Eucalyptus grandis HOM05D008010 ORTHO05D010085 5.6e-22 109.0 238 40.8
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 5.6e-22 109.0 257 39.3
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 7.3e-22 108.6 281 37.4
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 2.1e-21 107.1 208 43.3
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 1.8e-20 104.0 233 39.5
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.8e-20 104.0 263 37.3
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 2.3e-20 103.6 243 40.3
FvH4_3g07440 Fragaria vesca HOM05D008010 ORTHO05D010085 5.2e-20 102.4 261 39.8
Thecc.06G167300 Theobroma cacao HOM05D008010 ORTHO05D010085 5.2e-20 102.4 262 38.5
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 1.2e-19 101.3 206 41.7
FAN21G0683 Fragaria x ananassa HOM05D008010 ORTHO05D010085 2.0e-19 100.5 201 42.3
Potri.004G059300 Populus trichocarpa HOM05D008010 ORTHO05D010085 2.6e-19 100.1 188 42.6
Cpa.g.sc7.102 Carica papaya HOM05D008010 ORTHO05D010085 4.4e-19 99.4 247 38.9
Atru.chr10.1588_Atru.chr10.1589 Acer truncatum HOM05D008010 ORTHO05D010085 5.8e-19 99.0 203 42.9
QL05p048352 Quercus lobata HOM05D008010 ORTHO05D010085 2.9e-18 96.7 262 36.3
RcHm_v2.0_Chr5g0011411 Rosa chinensis HOM05D008010 ORTHO05D010085 2.9e-18 96.7 258 38.8
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 6.4e-18 95.5 204 40.2
Prupe.4G065300 Prunus persica HOM05D008010 ORTHO05D010085 1.1e-17 94.7 254 37.4
CDE03G0033 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 4.1e-17 92.8 230 38.3
Ciclev10016384m.g Citrus clementina HOM05D008010 ORTHO05D010085 7.0e-17 92.0 236 36.4
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 1.6e-16 90.9 268 34.3
THA.LOC104806163 Tarenaya hassleriana HOM05D008010 ORTHO05D010085 2.0e-16 90.5 212 40.1
Gohir.A06G132400 Gossypium hirsutum HOM05D008010 ORTHO05D010085 4.6e-16 89.4 216 35.6
MD05G1297000 Malus domestica HOM05D008010 ORTHO05D010085 7.8e-16 88.6 271 34.3
EL10Ac8g20573 Beta vulgaris HOM05D008010 ORTHO05D010085 1.7e-15 87.4 252 37.3
Gorai.010G160200 Gossypium raimondii HOM05D008010 ORTHO05D010085 1.7e-15 87.4 268 34.7
Lalb_Chr18g0054681 Lupinus albus HOM05D008010 ORTHO05D010085 3.9e-15 86.3 174 39.1
AUR62027705 Chenopodium quinoa HOM05D008010 ORTHO05D010085 6.6e-15 85.5 194 38.7
ECA248G1583 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.1e-14 84.7 203 36.9
Actinidia16781 Actinidia chinensis HOM05D008010 ORTHO05D010085 1.9e-14 84.0 157 44.6
Gohir.D06G137900 Gossypium hirsutum HOM05D008010 ORTHO05D010085 2.5e-14 83.6 270 33.0
ClCG03G007530 Citrullus lanatus HOM05D008010 ORTHO05D010085 3.3e-14 83.2 226 37.2
ATR0127G032 Amborella trichopoda HOM05D008010 ORTHO05D010085 5.6e-14 82.4 238 35.7
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 7.3e-14 82.0 193 35.8
CARHR225590 Cardamine hirsuta HOM05D008010 ORTHO05D010085 1.6e-13 80.9 208 37.5
AUR62039459 Chenopodium quinoa HOM05D008010 ORTHO05D010085 1.6e-13 80.9 195 38.5
Lj6g0013702 Lotus japonicus HOM05D008010 ORTHO05D010085 1.6e-13 80.9 244 38.9
Sed0009144 Sechium edule HOM05D008010 ORTHO05D010085 2.1e-13 80.5 265 34.3
TAR624G0391 Trochodendron aralioides HOM05D008010 ORTHO05D010085 2.8e-13 80.1 262 35.5
BcaNung05918 Brassica carinata HOM05D008010 ORTHO05D010085 4.7e-13 79.3 223 36.8
AT4G18740 Arabidopsis thaliana HOM05D008010 ORTHO05D010085 8.0e-13 78.6 211 37.9
MELO3C002669.2 Cucumis melo HOM05D008010 ORTHO05D010085 8.0e-13 78.6 222 35.1
Duzib160G0139 Durio zibethinus HOM05D008010 ORTHO05D010085 1.1e-12 78.2 260 33.1
ECA248G2359 Erigeron canadensis HOM05D008010 ORTHO05D010085 8.9e-12 75.1 151 40.4
AL7G35510 Arabidopsis lyrata HOM05D008010 ORTHO05D010085 1.2e-11 74.7 205 37.1
arahy.Tifrunner.gnm1.ann1.42QDDD Arachis hypogaea HOM05D008010 ORTHO05D010085 5.8e-11 72.4 199 37.7
SGA_v2.0_scaffold1G00067 Striga asiatica HOM05D008010 ORTHO05D010085 2.9e-10 70.1 245 31.4
arahy.Tifrunner.gnm1.ann1.NGY302 Arachis hypogaea HOM05D008010 ORTHO05D010085 3.7e-10 69.7 216 33.8
BraA01t01022Z Brassica rapa HOM05D008010 ORTHO05D010085 6.4e-10 68.9 204 34.8
BcaC09g51471 Brassica carinata HOM05D008010 ORTHO05D010085 1.4e-09 67.8 209 34.0
A01p10760 Brassica napus HOM05D008010 ORTHO05D010085 1.4e-09 67.8 205 34.6
CsaV3_1G033180 Cucumis sativus L. HOM05D008010 ORTHO05D010085 2.4e-09 67.0 212 33.0
C01p12720 Brassica napus HOM05D008010 ORTHO05D010085 5.4e-09 65.9 248 32.7
Thhalv10026132m.g Eutrema salsugineum HOM05D008010 ORTHO05D010085 5.4e-09 65.9 160 36.9
BolC1t01249H Brassica oleracea HOM05D008010 ORTHO05D010085 2.1e-08 63.9 209 34.9
Aa31LG6G1450 Aethionema arabicum HOM05D008010 ORTHO05D010085 3.5e-08 63.2 161 34.2
Sp7g17440 Schrenkiella parvula HOM05D008010 ORTHO05D010085 6.0e-08 62.4 195 34.9
unitig_85.g27297 Utricularia gibba HOM05D008010 ORTHO05D010085 1.7e-07 60.8 213 32.9
Migut.N02209 Erythranthe guttata HOM05D005109 ORTHO05D006084 1.9e-06 57.4 211 27.5
CDE04G0279 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 7.3e-06 55.5 211 31.3
Carub.0007s2250 Capsella rubella HOM05D008010 ORTHO05D010085 9.5e-06 55.1 193 32.1


User provided reference genes

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