Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G411.107 Capsicum annuum HOM05D002370 ORTHO05D003878 0.0e+00 1210.3 620 100.0
PGSC0003DMG401025733 Solanum tuberosum HOM05D002370 ORTHO05D003878 1.4e-164 583.9 349 88.5
Solyc01g106770.4 Solanum lycopersicum HOM05D002370 ORTHO05D003878 1.2e-163 580.9 349 88.0
Sopen01g049080 Solanum pennellii HOM05D002370 ORTHO05D003878 1.2e-163 580.9 349 88.0
Peaxi162Scf00016g03243 Petunia axillaris HOM05D002370 ORTHO05D003878 1.1e-161 574.3 349 86.8
Nitab4.5_0000772g0070 Nicotiana tabacum HOM05D002370 ORTHO05D003878 1.7e-157 560.5 349 85.1
Nitab4.5_0010974g0020 Nicotiana tabacum HOM05D002370 ORTHO05D003878 1.7e-157 560.5 349 85.1
Nn5g30713 Nelumbo nucifera HOM05D002370 ORTHO05D003878 6.8e-151 538.5 346 80.9
DCAR_003604 Daucus carota HOM05D002370 ORTHO05D003878 7.5e-150 535.0 360 78.6
Gohir.D01G009100 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.7e-149 532.7 346 79.5
Gorai.002G011200 Gossypium raimondii HOM05D002370 ORTHO05D003878 3.7e-149 532.7 346 79.5
Dinv09531 Davidia involucrata HOM05D002370 ORTHO05D003878 6.3e-149 531.9 346 81.2
Gohir.A12G018200 Gossypium hirsutum HOM05D002370 ORTHO05D003878 1.1e-148 531.2 346 79.2
Thecc.02G120900 Theobroma cacao HOM05D002370 ORTHO05D003878 1.8e-148 530.4 346 79.5
Gorai.008G019100 Gossypium raimondii HOM05D002370 ORTHO05D003878 2.4e-148 530.0 346 79.2
Gohir.D12G018800 Gossypium hirsutum HOM05D002370 ORTHO05D003878 3.1e-148 529.6 346 79.2
MD00G1031100 Malus domestica HOM05D002370 ORTHO05D003878 3.1e-148 529.6 346 78.6
MD10G1112000 Malus domestica HOM05D002370 ORTHO05D003878 3.1e-148 529.6 346 78.6
Aqoxy6G01518 Aquilegia oxysepala HOM05D002370 ORTHO05D003878 7.7e-147 525.0 346 78.6
Hma1.2p1_1051F.1_g252210 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 1.0e-146 524.6 332 81.6
DCAR_021938 Daucus carota HOM05D002370 ORTHO05D003878 1.3e-146 524.2 349 78.8
Migut.B00477 Erythranthe guttata HOM05D002370 ORTHO05D003878 1.3e-146 524.2 346 79.8
Lj5C222G6 Lonicera japonica HOM05D002370 ORTHO05D003878 1.3e-146 524.2 349 77.9
ClCG02G007160 Citrullus lanatus HOM05D002370 ORTHO05D003878 1.7e-146 523.9 346 78.9
MSTRG.16667 Avicennia marina HOM05D002370 ORTHO05D003878 2.9e-146 523.1 332 81.3
MELO3C018533.2 Cucumis melo HOM05D002370 ORTHO05D003878 2.9e-146 523.1 346 78.9
CsaV3_7G007670 Cucumis sativus L. HOM05D002370 ORTHO05D003878 3.8e-146 522.7 346 78.6
MD05G1107800 Malus domestica HOM05D002370 ORTHO05D003878 5.0e-146 522.3 332 80.1
Prupe.8G151300 Prunus persica HOM05D002370 ORTHO05D003878 5.0e-146 522.3 346 77.7
TAR381G0773 Trochodendron aralioides HOM05D002370 ORTHO05D003878 5.0e-146 522.3 350 78.0
Ciclev10027661m.g Citrus clementina HOM05D002370 ORTHO05D003878 8.6e-146 521.5 346 78.6
PSO675G4735 Papaver somniferum HOM05D002370 ORTHO05D003878 1.9e-145 520.4 356 75.0
SGA_v2.0_scaffold519G52682 Striga asiatica HOM05D002370 ORTHO05D003878 1.9e-145 520.4 346 79.2
CiPaw.06G163300 Carya illinoinensis HOM05D002370 ORTHO05D003878 3.3e-145 519.6 346 78.0
Glyma.11G002600 Glycine max HOM05D002370 ORTHO05D003878 4.3e-145 519.2 346 77.2
Sed0018886 Sechium edule HOM05D002370 ORTHO05D003878 5.6e-145 518.8 346 77.5
CSS0028039 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 7.3e-145 518.5 346 78.6
Glyma.01G241300 Glycine max HOM05D002370 ORTHO05D003878 1.2e-144 517.7 346 77.2
Atru.chr4.144 Acer truncatum HOM05D002370 ORTHO05D003878 1.6e-144 517.3 346 77.2
PSO541G1630 Papaver somniferum HOM05D002370 ORTHO05D003878 1.6e-144 517.3 346 76.6
arahy.Tifrunner.gnm1.ann1.3J1H0B Arachis hypogaea HOM05D002370 ORTHO05D003878 2.1e-144 516.9 346 76.9
arahy.Tifrunner.gnm1.ann1.NYP183 Arachis hypogaea HOM05D002370 ORTHO05D003878 2.1e-144 516.9 346 76.9
Atru.chr4.155 Acer truncatum HOM05D002370 ORTHO05D003878 3.6e-144 516.2 346 77.2
ECA232G2594 Erigeron canadensis HOM05D002370 ORTHO05D003878 6.1e-144 515.4 346 77.5
Oeu028915.2 Olea europaea HOM05D002370 ORTHO05D003878 1.0e-143 514.6 332 80.1
HanXRQChr04g0107251 Helianthus annuus HOM05D002370 ORTHO05D003878 1.4e-143 514.2 346 77.5
VMungo1215G1081 Vigna mungo HOM05D002370 ORTHO05D003878 2.3e-143 513.5 346 76.6
Lsat_1_v5_gn_4_143680 Lactuca sativa HOM05D002370 ORTHO05D003878 3.0e-143 513.1 346 77.2
Sc18g0007320 Simmondsia chinensis HOM05D002370 ORTHO05D003878 3.0e-143 513.1 363 75.2
EL10Ac9g22169 Beta vulgaris HOM05D002370 ORTHO05D003878 4.0e-143 512.7 370 73.5
CSS0026275 Camellia sinensis var. sinensis HOM05D002370 ORTHO05D003878 5.2e-143 512.3 332 78.9
CAN.G1164.4 Capsicum annuum HOM05D002370 ORTHO05D003878 5.2e-143 512.3 344 79.9
TWI59G1328 Tripterygium wilfordii HOM05D002370 ORTHO05D003878 5.2e-143 512.3 346 76.9
TAR625G0605 Trochodendron aralioides HOM05D002370 ORTHO05D003878 6.8e-143 511.9 350 76.6
Phvul.002G049900 Phaseolus vulgaris HOM05D002370 ORTHO05D003878 2.0e-142 510.4 346 76.3
Duzib132G1084 Durio zibethinus HOM05D002370 ORTHO05D003878 3.4e-142 509.6 332 78.3
Actinidia02446 Actinidia chinensis HOM05D002370 ORTHO05D003878 5.7e-142 508.8 349 76.2
Hma1.2p1_0661F.1_g197980 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 1.3e-141 507.7 331 79.5
Rhsim11G0149700 Rhododendron simsii HOM05D002370 ORTHO05D003878 2.9e-141 506.5 346 76.6
ATR0753G079 Amborella trichopoda HOM05D002370 ORTHO05D003878 3.7e-141 506.1 346 75.7
THA.LOC104826500 Tarenaya hassleriana HOM05D002370 ORTHO05D003878 3.7e-141 506.1 346 75.1
AUR62030874 Chenopodium quinoa HOM05D002370 ORTHO05D003878 4.9e-141 505.8 355 74.6
Lj1g0008728 Lotus japonicus HOM05D002370 ORTHO05D003878 6.4e-141 505.4 351 75.2
HanXRQChr04g0107281 Helianthus annuus HOM05D002370 ORTHO05D003878 1.1e-140 504.6 346 76.0
CDE06G0012 Ceratophyllum demersum HOM05D002370 ORTHO05D003878 1.4e-140 504.2 349 74.5
FAN15G3522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 3.2e-140 503.1 347 76.4
Potri.001G289200 Populus trichocarpa HOM05D002370 ORTHO05D003878 3.2e-140 503.1 346 75.7
Manes.07G052660 Manihot esculenta HOM05D002370 ORTHO05D003878 4.1e-140 502.7 344 75.9
Medtr5g005380 Medicago truncatula HOM05D002370 ORTHO05D003878 4.1e-140 502.7 353 74.2
CiPaw.05G021600 Carya illinoinensis HOM05D002370 ORTHO05D003878 7.0e-140 501.9 346 75.1
Ca_24363_v3 Cicer arietinum L. HOM05D002370 ORTHO05D003878 7.0e-140 501.9 346 75.1
AUR62027030 Chenopodium quinoa HOM05D002370 ORTHO05D003878 1.2e-139 501.1 355 74.4
FvH4_2g03080 Fragaria vesca HOM05D002370 ORTHO05D003878 1.2e-139 501.1 347 76.1
FAN24G1227 Fragaria x ananassa HOM05D002370 ORTHO05D003878 1.2e-139 501.1 347 76.1
RcHm_v2.0_Chr6g0247951 Rosa chinensis HOM05D002370 ORTHO05D003878 1.6e-139 500.7 347 76.4
FAN20G2522 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.0e-139 500.4 347 75.8
FAN27G1380 Fragaria x ananassa HOM05D002370 ORTHO05D003878 2.0e-139 500.4 347 76.1
Psat4g229000 Pisum sativum HOM05D002370 ORTHO05D003878 2.0e-139 500.4 346 74.9
TPR.G8301 Trifolium pratense HOM05D002370 ORTHO05D003878 2.0e-139 500.4 346 74.9
Potri.009G084500 Populus trichocarpa HOM05D002370 ORTHO05D003878 3.5e-139 499.6 346 75.1
Sabra09G0065200 Salix brachista HOM05D002370 ORTHO05D003878 2.3e-138 496.9 346 75.1
PSO675G3080 Papaver somniferum HOM05D002370 ORTHO05D003878 1.1e-137 494.6 354 72.9
Lalb_Chr05g0210831 Lupinus albus HOM05D002370 ORTHO05D003878 1.9e-137 493.8 348 73.0
PSO732G0082 Papaver somniferum HOM05D002370 ORTHO05D003878 1.9e-137 493.8 332 76.2
AL1G57600 Arabidopsis lyrata HOM05D002370 ORTHO05D003878 2.5e-137 493.4 346 74.0
AT1G50030 Arabidopsis thaliana HOM05D002370 ORTHO05D003878 2.5e-137 493.4 346 74.0
Thhalv10011174m.g Eutrema salsugineum HOM05D002370 ORTHO05D003878 2.5e-137 493.4 346 73.7
Aa31LG10G4090 Aethionema arabicum HOM05D002370 ORTHO05D003878 4.3e-137 492.7 332 75.9
Carub.0001s3921 Capsella rubella HOM05D002370 ORTHO05D003878 4.3e-137 492.7 346 74.0
Sp1g36890 Schrenkiella parvula HOM05D002370 ORTHO05D003878 4.3e-137 492.7 346 73.4
PGR142G4285 Punica granatum HOM05D002370 ORTHO05D003878 2.1e-136 490.3 332 76.2
Sabra16G0181000 Salix brachista HOM05D002370 ORTHO05D003878 4.7e-136 489.2 382 68.8
CAN.G1627.7 Capsicum annuum HOM05D002370 ORTHO05D003878 8.0e-136 488.4 604 51.5
HPP92_016412 Vanilla planifolia HOM05D002370 ORTHO05D003878 8.0e-136 488.4 350 72.9
Eucgr.I02503 Eucalyptus grandis HOM05D002370 ORTHO05D003878 3.4e-134 483.0 332 75.6
BcaC05g27452 Brassica carinata HOM05D002370 ORTHO05D003878 7.5e-134 481.9 346 72.3
C05p34110 Brassica napus HOM05D002370 ORTHO05D003878 7.5e-134 481.9 346 72.3
BolC5t32146H Brassica oleracea HOM05D002370 ORTHO05D003878 7.5e-134 481.9 346 72.3
BraA05t20943Z Brassica rapa HOM05D002370 ORTHO05D003878 7.5e-134 481.9 346 72.3
A05p20360 Brassica napus HOM05D002370 ORTHO05D003878 2.9e-133 479.9 346 72.0
A06p03390 Brassica napus HOM05D002370 ORTHO05D003878 7.0e-132 475.3 332 72.9
BraA06t23548Z Brassica rapa HOM05D002370 ORTHO05D003878 7.0e-132 475.3 332 72.9
BcaB07g33455 Brassica carinata HOM05D002370 ORTHO05D003878 1.2e-131 474.6 332 72.6
BcaC08g43183 Brassica carinata HOM05D002370 ORTHO05D003878 1.6e-131 474.2 346 70.2
BolC6t35612H Brassica oleracea HOM05D002370 ORTHO05D003878 1.6e-131 474.2 346 70.2
C06p04900 Brassica napus HOM05D002370 ORTHO05D003878 1.0e-130 471.5 332 72.3
SEGI_32787 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 1.5e-129 467.6 334 72.2
CARHR040140 Cardamine hirsuta HOM05D002370 ORTHO05D003878 4.3e-129 466.1 332 72.3
SEGI_12344 Sequoiadendron giganteum HOM05D002370 ORTHO05D003878 2.8e-128 463.4 334 71.3
Zm00001eb285840 Zea mays HOM05D002370 ORTHO05D003878 2.8e-128 463.4 333 73.3
Os05g0235300 Oryza sativa ssp. japonica HOM05D002370 ORTHO05D003878 8.9e-127 458.4 333 71.8
unitig_60.g25464 Utricularia gibba HOM05D002370 ORTHO05D003878 1.5e-126 457.6 346 71.4
SHI03324 Sapria himalayana HOM05D002370 ORTHO05D003878 2.4e-124 450.3 312 74.7
GSVIVG01037040001 Vitis vinifera HOM05D002370 ORTHO05D003878 3.5e-123 446.4 722 42.9
COL.COLO4_32473 Corchorus olitorius HOM05D002370 ORTHO05D003878 4.6e-123 446.0 341 69.5
BcaB02g11126 Brassica carinata HOM05D002370 ORTHO05D003878 2.5e-121 440.3 327 71.3
Ah.01g024560 Amaranthus hybridus HOM05D002370 ORTHO05D003878 1.4e-116 424.5 341 68.3
SalBow6G1889 Salvia bowleyana HOM05D002370 ORTHO05D003878 1.9e-116 424.1 341 68.0
SGA_v2.0_scaffold32G12979 Striga asiatica HOM05D002370 ORTHO05D003878 7.1e-116 422.2 446 56.5
AagrBONN_evm.TU.Sc2ySwM_228.5412 Anthoceros agrestis HOM05D002370 ORTHO05D003878 2.0e-110 404.1 379 58.3
CAN.G1164.1 Capsicum annuum HOM05D002370 ORTHO05D003878 4.4e-110 402.9 268 81.0
Mapoly0047s0119 Marchantia polymorpha HOM05D002370 ORTHO05D003878 3.3e-105 386.7 317 63.7
Pp3c6_4910 Physcomitrium patens HOM05D002370 ORTHO05D003878 3.3e-105 386.7 331 61.9
SMO147G0225 Selaginella moellendorffii HOM05D002370 ORTHO05D003878 1.3e-104 384.8 333 62.2
Cc02_g20170 Coffea canephora HOM05D002370 ORTHO05D003878 1.1e-103 381.7 270 72.6
Cpa.g.sc106.24 Carica papaya HOM05D002370 ORTHO05D003878 5.8e-102 375.9 271 71.6
QL11p028985 Quercus lobata HOM05D002370 ORTHO05D003878 7.1e-100 369.0 252 73.4
CAN.G289.59 Capsicum annuum HOM05D002370 ORTHO05D003878 1.0e-98 365.2 229 84.7
vmacro01937 Vaccinium macrocarpon HOM05D002370 ORTHO05D003878 3.3e-97 360.1 326 62.6
Oeu025303.1 Olea europaea HOM05D002370 ORTHO05D003878 1.6e-96 357.8 219 85.4
Haze_10321 Corylus avellana HOM05D002370 ORTHO05D003878 2.1e-96 357.5 277 67.1
CAN.G1627.3 Capsicum annuum HOM05D002370 ORTHO05D003878 6.2e-96 355.9 223 85.7
Gohir.A01G009566 Gossypium hirsutum HOM05D002370 ORTHO05D003878 2.3e-82 310.8 203 77.8
PRCOL_00002418 Prasinoderma coloniale HOM05D002370 ORTHO05D003878 4.6e-75 286.6 359 44.0
CBR_g23926 Chara braunii HOM05D002370 ORTHO05D003878 4.2e-68 263.5 337 43.0
MCO06G142 Micromonas commoda HOM05D002370 ORTHO05D003878 2.1e-67 261.2 340 45.9
Cre09.g400553 Chlamydomonas reinhardtii HOM05D002370 ORTHO05D003878 3.8e-61 240.4 323 44.3
Lalb_Chr16g0376321 Lupinus albus HOM05D002370 ORTHO05D003878 1.5e-57 228.4 132 87.1
CAN.G10698.1 Capsicum annuum HOM05D002370 ORTHO05D003878 4.2e-52 210.3 118 91.5
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 2.9e-45 187.6 106 86.8
CAN.G606.78 Capsicum annuum HOM05D002370 ORTHO05D003878 7.2e-44 183.0 97 94.8
Hma1.2p1_1758F.1_g301190 Hydrangea macrophylla HOM05D002370 ORTHO05D003878 2.7e-43 181.0 103 88.3
Haze_10320 Corylus avellana HOM05D002370 ORTHO05D003878 8.0e-43 179.5 149 63.8
Cc02_g20160 Coffea canephora HOM05D002370 ORTHO05D003878 6.8e-42 176.4 97 91.8
CAN.G411.104 Capsicum annuum HOM05D002370 ORTHO05D003878 1.4e-39 168.7 105 83.8
CAN.G606.79 Capsicum annuum HOM05D002370 ORTHO05D020284 1.5e-33 148.7 143 55.9
Cfa026368 Carpinus fangiana HOM05D002370 ORTHO05D003878 4.9e-32 143.7 306 32.4
Actinidia17531 Actinidia chinensis HOM05D002370 ORTHO05D003878 1.1e-31 142.5 113 68.1
FAN20G0378 Fragaria x ananassa HOM05D002370 ORTHO05D020284 3.5e-22 110.9 176 40.3
Atru.chr5.2257 Acer truncatum HOM05D002370 ORTHO05D003878 2.5e-20 104.8 59 86.4
Haze_26242 Corylus avellana HOM05D002370 ORTHO05D003878 2.5e-20 104.8 238 30.7
CDE04G3197 Ceratophyllum demersum HOM05D002370 ORTHO05D020284 3.6e-19 100.9 75 69.3
Lalb_Chr16g0376331 Lupinus albus HOM05D002370 ORTHO05D020284 2.6e-17 94.7 53 84.9
CAN.G289.58 Capsicum annuum HOM05D002370 ORTHO05D003878 1.3e-16 92.4 132 46.2
FAN15G0843 Fragaria x ananassa HOM05D002370 ORTHO05D003878 9.2e-15 86.3 69 60.9
PSO017G1105 Papaver somniferum HOM05D000352 ORTHO05D000260 1.6e-14 85.5 113 46.0
CAN.G411.96 Capsicum annuum HOM05D002370 ORTHO05D003878 1.5e-12 79.0 51 74.5
TAR381G0014 Trochodendron aralioides HOM05D002370 ORTHO05D414920 4.3e-12 77.4 50 74.0
CAN.G411.94 Capsicum annuum HOM05D009846 ORTHO05D000368 3.4e-09 67.8 33 93.9
CAN.G1164.5 Capsicum annuum HOM05D009846 ORTHO05D002175 7.5e-09 66.6 42 73.8
FvH4_2g06710 Fragaria vesca HOM05D002370 ORTHO05D020284 1.4e-07 62.4 38 78.9
FAN24G2034 Fragaria x ananassa HOM05D002370 ORTHO05D020284 1.4e-07 62.4 38 78.9
Lsat_1_v5_gn_5_137761 Lactuca sativa HOM05D002370 ORTHO05D020284 4.6e-06 57.4 32 81.2


User provided reference genes

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