Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 1.9e-95 352.4 169 100.0
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 3.2e-87 325.1 169 91.7
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 1.9e-84 315.8 169 87.0
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.4e-77 293.1 163 83.4
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 2.5e-76 288.9 162 82.7
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 9.7e-76 287.0 166 77.1
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 2.2e-75 285.8 163 81.0
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 3.7e-75 285.0 167 77.2
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 6.3e-75 284.3 167 77.2
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 1.4e-74 283.1 166 77.1
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 2.4e-74 282.3 164 79.3
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.1e-74 282.0 164 78.0
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 5.3e-74 281.2 167 75.4
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 2.0e-73 279.3 165 77.0
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 2.0e-73 279.3 167 82.0
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.0e-72 276.9 165 76.4
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 1.0e-72 276.9 167 81.4
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 1.0e-72 276.9 162 79.6
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 1.3e-72 276.6 162 77.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 1.3e-72 276.6 163 76.7
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 1.7e-72 276.2 169 72.8
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 5.0e-72 274.6 167 73.7
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 1.1e-71 273.5 162 77.2
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.4e-71 273.1 163 77.9
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 1.4e-71 273.1 161 77.6
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 1.4e-71 273.1 161 78.3
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.4e-71 273.1 167 74.3
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.9e-71 272.7 162 77.8
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 1.9e-71 272.7 163 77.9
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 3.2e-71 271.9 163 77.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 3.2e-71 271.9 157 76.4
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 4.2e-71 271.6 162 75.3
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 5.5e-71 271.2 162 76.5
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 7.2e-71 270.8 166 74.7
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 2.1e-70 269.2 164 76.8
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 2.1e-70 269.2 167 74.3
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 2.1e-70 269.2 167 74.3
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 2.7e-70 268.9 157 75.8
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 3.6e-70 268.5 168 75.6
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.0e-69 266.9 163 75.5
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 1.8e-69 266.2 163 73.0
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 2.3e-69 265.8 160 76.2
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 2.3e-69 265.8 162 75.9
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 2.0e-68 262.7 166 71.7
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 2.0e-68 262.7 162 71.0
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 4.4e-68 261.5 165 74.5
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 7.4e-68 260.8 163 73.0
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 72.4
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.3e-67 260.0 163 74.8
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 2.2e-67 259.2 162 71.6
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 3.7e-67 258.5 162 71.0
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 3.7e-67 258.5 164 72.6
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 1.8e-66 256.1 164 70.1
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 5.3e-66 254.6 167 68.9
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 5.3e-66 254.6 163 73.0
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 5.3e-66 254.6 163 73.0
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 5.3e-66 254.6 164 73.2
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 9.1e-66 253.8 164 71.3
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.5e-65 253.1 161 73.3
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.0e-65 252.7 166 71.7
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 4.5e-65 251.5 169 69.8
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 5.9e-65 251.1 169 69.8
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 7.7e-65 250.8 164 70.1
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 1.3e-64 250.0 165 67.9
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 1.3e-64 250.0 163 70.6
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 3.8e-64 248.4 163 69.9
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 8.5e-64 247.3 164 67.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 1.4e-63 246.5 165 69.7
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 3.2e-63 245.4 164 71.3
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 4.2e-63 245.0 162 67.9
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.6e-62 243.0 168 70.2
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 3.6e-62 241.9 163 69.3
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 6.1e-62 241.1 165 65.5
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.0e-61 240.4 165 65.5
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 1.4e-61 240.0 163 69.9
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 2.3e-61 239.2 163 69.3
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 5.2e-61 238.0 158 67.1
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 8.8e-61 237.3 165 65.5
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 8.8e-61 237.3 123 88.6
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 1.1e-60 236.9 167 70.1
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 1.5e-60 236.5 165 64.8
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 5.7e-60 234.6 165 64.2
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 3.7e-59 231.9 165 63.0
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 5.3e-58 228.0 163 64.4
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 1.3e-56 223.4 160 68.1
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 2.5e-55 219.2 142 71.8
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 3.6e-54 215.3 141 69.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 6.7e-53 211.1 139 66.9
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 5.7e-52 208.0 139 66.2
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.4e-50 203.4 164 61.6
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 1.4e-50 203.4 164 60.4
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 1.8e-50 203.0 174 59.8
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 2.4e-50 202.6 166 59.0
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 4.1e-50 201.8 155 67.7
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 1.6e-49 199.9 164 62.8
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.0e-49 199.5 140 65.7
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 8.5e-48 194.1 162 58.6
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 1.5e-47 193.4 158 55.1
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 4.2e-47 191.8 168 57.7
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 7.2e-47 191.0 171 56.1
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 6.1e-46 188.0 162 56.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 8.0e-46 187.6 166 58.4
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 4.0e-45 185.3 111 73.9
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 4.8e-43 178.3 171 55.0
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 6.3e-43 177.9 163 54.0
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 2.4e-42 176.0 163 50.3
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 8.6e-40 167.5 151 55.6
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.5e-39 166.8 163 49.1
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 5.2e-37 158.3 159 47.8
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 6.8e-37 157.9 83 91.6
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 2.4e-34 149.4 143 52.4
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.1e-30 136.3 168 47.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 4.7e-30 135.2 151 49.7
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 6.8e-29 131.3 130 53.8
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 8.9e-29 131.0 87 71.3
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 7.5e-28 127.9 101 60.4
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 1.2e-17 94.0 51 76.5
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 1.2e-17 94.0 152 38.8
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 2.3e-13 79.7 44 77.3
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 2.2e-11 73.2 119 38.7
Oeu063385.1 Olea europaea HOM05D006801 ORTHO05D008490 1.6e-06 57.0 78 42.3


User provided reference genes

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