Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G407.2 Capsicum annuum HOM05D006125 ORTHO05D007404 3.7e-42 174.5 89 100.0
Solyc03g117580.3 Solanum lycopersicum HOM05D006125 ORTHO05D007404 6.1e-37 157.1 89 91.0
Sopen03g036490 Solanum pennellii HOM05D006125 ORTHO05D007404 6.1e-37 157.1 89 91.0
PGSC0003DMG400014151 Solanum tuberosum HOM05D006125 ORTHO05D007404 1.4e-36 156.0 89 91.0
Nitab4.5_0002700g0200 Nicotiana tabacum HOM05D006125 ORTHO05D007404 6.3e-34 147.1 89 84.3
Nitab4.5_0009867g0040 Nicotiana tabacum HOM05D006125 ORTHO05D007404 1.0e-31 139.8 82 85.4
Migut.I00687 Erythranthe guttata HOM05D006125 ORTHO05D007404 5.7e-27 124.0 69 87.0
Oeu009806.1 Olea europaea HOM05D006125 ORTHO05D007404 5.7e-27 124.0 84 72.6
Cc04_g05190 Coffea canephora HOM05D006125 ORTHO05D007404 1.7e-26 122.5 85 71.8
SalBow7G4057 Salvia bowleyana HOM05D006125 ORTHO05D007404 2.8e-26 121.7 72 80.6
QL07p031505 Quercus lobata HOM05D006125 ORTHO05D007404 1.2e-24 116.3 83 68.7
Dinv21417 Davidia involucrata HOM05D006125 ORTHO05D007404 1.6e-24 115.9 79 73.4
QL07p030560 Quercus lobata HOM05D006125 ORTHO05D007404 1.6e-24 115.9 83 68.7
Zm00001eb176360 Zea mays HOM05D006125 ORTHO05D007404 3.5e-24 114.8 77 71.4
Actinidia25476 Actinidia chinensis HOM05D006125 ORTHO05D007404 1.7e-23 112.5 83 68.7
Ciclev10026865m.g Citrus clementina HOM05D006125 ORTHO05D007404 1.7e-23 112.5 83 65.1
MELO3C023472.2 Cucumis melo HOM05D006125 ORTHO05D007404 2.2e-23 112.1 79 64.6
Rhsim08G0204300 Rhododendron simsii HOM05D006125 ORTHO05D007404 2.2e-23 112.1 95 60.0
CANSAT56G2558 Cannabis sativa HOM05D006125 ORTHO05D007404 2.9e-23 111.7 83 65.1
Os12g0556400 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 2.9e-23 111.7 72 68.1
ClCG09G003380 Citrullus lanatus HOM05D006125 ORTHO05D007404 1.1e-22 109.8 84 64.3
Actinidia18251 Actinidia chinensis HOM05D006125 ORTHO05D007404 1.5e-22 109.4 83 65.1
CiPaw.09G167300 Carya illinoinensis HOM05D006125 ORTHO05D007404 1.5e-22 109.4 83 62.7
AL2G40490 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 1.9e-22 109.0 71 67.6
Os08g0272000 Oryza sativa ssp. japonica HOM05D006125 ORTHO05D007404 1.9e-22 109.0 68 72.1
Hma1.2p1_0329F.1_g127170 Hydrangea macrophylla HOM05D006125 ORTHO05D007404 3.2e-22 108.2 78 65.4
Peaxi162Scf00553g00539 Petunia axillaris HOM05D006125 ORTHO05D007404 3.2e-22 108.2 83 71.1
Thecc.06G043200 Theobroma cacao HOM05D006125 ORTHO05D007404 4.2e-22 107.8 70 67.1
Gohir.A06G114500 Gossypium hirsutum HOM05D006125 ORTHO05D007404 5.5e-22 107.5 70 67.1
Prupe.3G100100 Prunus persica HOM05D006125 ORTHO05D007404 5.5e-22 107.5 71 69.0
MBI14_g09098_MAGBIO Magnolia biondii HOM05D006125 ORTHO05D007404 7.2e-22 107.1 89 58.4
Manes.11G068700 Manihot esculenta HOM05D006125 ORTHO05D007404 9.4e-22 106.7 84 60.7
Atru.chr1.2788 Acer truncatum HOM05D006125 ORTHO05D007404 1.6e-21 105.9 69 69.6
Gohir.D06G119100 Gossypium hirsutum HOM05D006125 ORTHO05D007404 1.6e-21 105.9 65 69.2
unitig_62.g23831 Utricularia gibba HOM05D006125 ORTHO05D007404 1.6e-21 105.9 84 64.3
Ca_06644_v3 Cicer arietinum L. HOM05D006125 ORTHO05D007404 2.7e-21 105.1 89 57.3
Prupe.2G074900 Prunus persica HOM05D006125 ORTHO05D007404 2.7e-21 105.1 70 67.1
Sed0014955 Sechium edule HOM05D006125 ORTHO05D007404 2.7e-21 105.1 68 72.1
HanXRQChr05g0153751 Helianthus annuus HOM05D006125 ORTHO05D007404 3.6e-21 104.8 76 61.8
Phvul.010G162500 Phaseolus vulgaris HOM05D006125 ORTHO05D007404 3.6e-21 104.8 83 60.2
RcHm_v2.0_Chr2g0132751 Rosa chinensis HOM05D006125 ORTHO05D007404 3.6e-21 104.8 79 64.6
ATR0580G075 Amborella trichopoda HOM05D006125 ORTHO05D007404 4.7e-21 104.4 71 66.2
TWI12G0957 Tripterygium wilfordii HOM05D006125 ORTHO05D007404 4.7e-21 104.4 71 66.2
PGR031G3360 Punica granatum HOM05D006125 ORTHO05D007404 6.1e-21 104.0 77 67.5
PGR037G0004 Punica granatum HOM05D006125 ORTHO05D007404 6.1e-21 104.0 77 67.5
Glyma.08G219900 Glycine max HOM05D006125 ORTHO05D007404 1.4e-20 102.8 78 61.5
Sed0010339 Sechium edule HOM05D006125 ORTHO05D007404 1.4e-20 102.8 85 63.5
CARHR073580 Cardamine hirsuta HOM05D006125 ORTHO05D007404 1.8e-20 102.4 79 58.2
Eucgr.J03118 Eucalyptus grandis HOM05D006125 ORTHO05D007404 1.8e-20 102.4 79 62.0
Lj3g0014233 Lotus japonicus HOM05D006125 ORTHO05D007404 1.8e-20 102.4 86 58.1
Lalb_Chr04g0264571 Lupinus albus HOM05D006125 ORTHO05D007404 2.3e-20 102.1 75 65.3
TAR383G0490 Trochodendron aralioides HOM05D006125 ORTHO05D007404 5.2e-20 100.9 69 65.2
Gorai.010G136700 Gossypium raimondii HOM05D006125 ORTHO05D007404 6.8e-20 100.5 71 64.8
Psat7g263200 Pisum sativum HOM05D006125 ORTHO05D007404 6.8e-20 100.5 86 59.3
Duzib160G0610 Durio zibethinus HOM05D006125 ORTHO05D007404 8.8e-20 100.1 79 58.2
MD09G1225600 Malus domestica HOM05D006125 ORTHO05D007404 1.2e-19 99.8 64 67.2
TPR.G29449 Trifolium pratense HOM05D006125 ORTHO05D007404 1.2e-19 99.8 85 56.5
HPP92_003757 Vanilla planifolia HOM05D006125 ORTHO05D007404 1.2e-19 99.8 74 60.8
Sc12g0007910 Simmondsia chinensis HOM05D006125 ORTHO05D007404 1.5e-19 99.4 78 59.0
CSS0032300 Camellia sinensis var. sinensis HOM05D006125 ORTHO05D007404 2.0e-19 99.0 68 67.6
MD17G1224400 Malus domestica HOM05D006125 ORTHO05D007404 2.0e-19 99.0 90 55.6
Medtr4g007290 Medicago truncatula HOM05D006125 ORTHO05D007404 2.6e-19 98.6 73 61.6
ECA246G3825 Erigeron canadensis HOM05D006125 ORTHO05D007404 3.4e-19 98.2 69 63.8
arahy.Tifrunner.gnm1.ann1.CEK6A4 Arachis hypogaea HOM05D006125 ORTHO05D007404 5.7e-19 97.4 83 60.2
PSO782G1324 Papaver somniferum HOM05D006125 ORTHO05D007404 7.5e-19 97.1 79 59.5
Potri.001G043300 Populus trichocarpa HOM05D006125 ORTHO05D007404 9.8e-19 96.7 75 58.7
arahy.Tifrunner.gnm1.ann1.P1DY4U Arachis hypogaea HOM05D006125 ORTHO05D007404 2.8e-18 95.1 81 59.3
Duzib235G1153 Durio zibethinus HOM05D006125 ORTHO05D007404 3.7e-18 94.7 61 63.9
Manes.04G101402 Manihot esculenta HOM05D006125 ORTHO05D007404 6.3e-18 94.0 57 71.9
Glyma.07G021900 Glycine max HOM05D006125 ORTHO05D007404 8.3e-18 93.6 84 54.8
AUR62034053 Chenopodium quinoa HOM05D006125 ORTHO05D007404 1.8e-17 92.4 69 68.1
AUR62040628 Chenopodium quinoa HOM05D006125 ORTHO05D007404 2.4e-17 92.0 60 71.7
FAN05G4250 Fragaria x ananassa HOM05D006125 ORTHO05D007404 2.3e-15 85.5 72 55.6
Thhalv10019388m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 3.8e-15 84.7 57 61.4
AT1G80890 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 6.6e-15 84.0 72 52.8
FvH4_6g28500 Fragaria vesca HOM05D006125 ORTHO05D007404 6.6e-15 84.0 72 54.2
FAN14G2502 Fragaria x ananassa HOM05D006125 ORTHO05D007404 6.6e-15 84.0 72 54.2
AL1G28160 Arabidopsis lyrata HOM05D006125 ORTHO05D007404 8.6e-15 83.6 61 62.3
AT1G16000 Arabidopsis thaliana HOM05D006125 ORTHO05D007404 1.5e-14 82.8 60 63.3
Carub.0001s1580 Capsella rubella HOM05D006125 ORTHO05D007404 1.5e-14 82.8 85 51.8
A07p44800 Brassica napus HOM05D006125 ORTHO05D007404 2.5e-14 82.0 57 61.4
C06p53620 Brassica napus HOM05D006125 ORTHO05D007404 2.5e-14 82.0 57 61.4
Aa31LG4G1200 Aethionema arabicum HOM05D006125 ORTHO05D007404 3.3e-14 81.6 66 60.6
BraA07t31987Z Brassica rapa HOM05D006125 ORTHO05D007404 3.3e-14 81.6 58 60.3
THA.LOC104808176 Tarenaya hassleriana HOM05D006125 ORTHO05D007404 3.3e-14 81.6 81 49.4
Sp5g34850 Schrenkiella parvula HOM05D006125 ORTHO05D007404 5.5e-14 80.9 68 54.4
Cpa.g.sc10.63 Carica papaya HOM05D006125 ORTHO05D007404 7.2e-14 80.5 79 53.2
FAN02G1155 Fragaria x ananassa HOM05D006125 ORTHO05D007404 9.5e-14 80.1 72 52.8
BcaB02g08714 Brassica carinata HOM05D006125 ORTHO05D007404 1.6e-13 79.3 60 56.7
BcaC08g47537 Brassica carinata HOM05D006125 ORTHO05D007404 2.1e-13 79.0 56 60.7
BolC6t40378H Brassica oleracea HOM05D006125 ORTHO05D007404 2.1e-13 79.0 56 60.7
BraA07t30336Z Brassica rapa HOM05D006125 ORTHO05D007404 2.8e-13 78.6 54 59.3
Thhalv10009235m.g Eutrema salsugineum HOM05D006125 ORTHO05D007404 2.8e-13 78.6 56 62.5
Aa31LG7G580 Aethionema arabicum HOM05D006125 ORTHO05D007404 3.6e-13 78.2 61 63.9
EL10Ac8g19423 Beta vulgaris HOM05D006125 ORTHO05D007404 3.6e-13 78.2 73 50.7
CARHR016510 Cardamine hirsuta HOM05D006125 ORTHO05D007404 6.1e-13 77.4 52 67.3
GSVIVG01015983001 Vitis vinifera HOM05D006125 ORTHO05D007404 1.0e-12 76.6 46 63.0
Sabra01G0029800 Salix brachista HOM05D006125 ORTHO05D007404 1.4e-12 76.3 111 39.6
Sp1g14310 Schrenkiella parvula HOM05D006125 ORTHO05D007404 1.4e-12 76.3 67 55.2
SGA_v2.0_scaffold5G02790 Striga asiatica HOM05D006125 ORTHO05D007404 1.8e-12 75.9 56 60.7
BcaC08g45345 Brassica carinata HOM05D006125 ORTHO05D007404 2.3e-12 75.5 53 62.3
C06p29590 Brassica napus HOM05D006125 ORTHO05D007404 2.3e-12 75.5 53 62.3
BolC6t38124H Brassica oleracea HOM05D006125 ORTHO05D007404 2.3e-12 75.5 53 62.3
COL.COLO4_26743 Corchorus olitorius HOM05D006125 ORTHO05D007404 2.3e-12 75.5 56 55.4
A07p26910 Brassica napus HOM05D006125 ORTHO05D007404 3.0e-12 75.1 52 63.5
CDE03G0106 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 2.0e-11 72.4 70 47.1
CDE06G2663 Ceratophyllum demersum HOM05D006125 ORTHO05D007404 2.0e-11 72.4 70 47.1
TPR.G3325 Trifolium pratense HOM05D006125 ORTHO05D007404 2.0e-11 72.4 88 42.0
SalBow6G4114 Salvia bowleyana HOM05D006125 ORTHO05D007404 4.4e-11 71.2 58 55.2
SMO367G0251 Selaginella moellendorffii HOM05D010715 ORTHO05D015311 5.7e-11 70.9 53 64.2
Dinv23278 Davidia involucrata HOM05D006125 ORTHO05D007404 7.5e-11 70.5 60 58.3
HanXRQChr08g0219721 Helianthus annuus HOM05D006125 ORTHO05D007404 9.8e-11 70.1 39 69.2
CsaV3_7G031850 Cucumis sativus L. HOM05D006125 ORTHO05D007404 1.7e-10 69.3 50 54.0
DCAR_021146 Daucus carota HOM05D006125 ORTHO05D007404 2.2e-10 68.9 48 60.4
vmacro19061 Vaccinium macrocarpon HOM05D006125 ORTHO05D007404 1.1e-09 66.6 60 55.0
QL04p040226 Quercus lobata HOM05D006125 ORTHO05D007404 2.4e-09 65.5 52 53.8
BcaB02g07240 Brassica carinata HOM05D005650 ORTHO05D007020 3.1e-09 65.1 57 50.9
Aqoxy7G03387 Aquilegia oxysepala HOM05D006125 ORTHO05D007404 5.4e-09 64.3 57 54.4
Cfa017829 Carpinus fangiana HOM05D006125 ORTHO05D007404 1.6e-08 62.8 56 51.8
Pp3c10_10990 Physcomitrium patens HOM05D006125 ORTHO05D007404 1.0e-07 60.1 66 40.9
SHI11295 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 59.7 39 61.5
SEGI_23088 Sequoiadendron giganteum HOM05D006125 ORTHO05D007404 1.7e-07 59.3 48 56.2
BcaB05g25217 Brassica carinata HOM05D006125 ORTHO05D007404 2.3e-07 58.9 100 38.0
Haze_20423 Corylus avellana HOM05D006125 ORTHO05D007404 5.0e-07 57.8 39 56.4
Potri.003G183501 Populus trichocarpa HOM05D006125 ORTHO05D007404 6.6e-07 57.4 58 43.1
CBR_g24249 Chara braunii HOM05D006125 ORTHO05D007404 1.5e-06 56.2 58 50.0
BolC2t09694H Brassica oleracea HOM05D006125 ORTHO05D007404 2.5e-06 55.5 44 50.0


User provided reference genes

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