Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G407.107 Capsicum annuum HOM05D008051 ORTHO05D009905 5.4e-72 274.6 185 100.0
PGSC0003DMG401000629 Solanum tuberosum HOM05D008051 ORTHO05D009905 9.0e-51 204.1 143 90.2
Solyc03g116450.1 Solanum lycopersicum HOM05D008051 ORTHO05D009905 1.1e-48 197.2 158 82.9
DCAR_009646 Daucus carota HOM05D008051 ORTHO05D009905 1.4e-30 137.1 162 65.4
Oeu021430.1 Olea europaea HOM05D008051 ORTHO05D009905 1.8e-30 136.7 147 71.4
Dinv40787 Davidia involucrata HOM05D002089 ORTHO05D002848 2.4e-27 126.3 134 72.4
CSS0002609 Camellia sinensis var. sinensis HOM05D008051 ORTHO05D009905 3.5e-26 122.5 145 68.3
Haze_21342 Corylus avellana HOM05D008051 ORTHO05D009905 5.9e-26 121.7 156 65.4
Haze_21340 Corylus avellana HOM05D008051 ORTHO05D009905 3.8e-25 119.0 156 64.7
Cfa012978 Carpinus fangiana HOM05D008051 ORTHO05D009905 1.9e-24 116.7 157 62.4
QL08p007021 Quercus lobata HOM05D008051 ORTHO05D009905 7.2e-24 114.8 146 69.2
Haze_09724 Corylus avellana HOM05D008051 ORTHO05D009905 1.2e-23 114.0 156 63.5
Rhsim06G0068300 Rhododendron simsii HOM05D008051 ORTHO05D009905 3.6e-23 112.5 98 52.0
vmacro21377 Vaccinium macrocarpon HOM05D008051 ORTHO05D009905 4.7e-23 112.1 143 60.1
Eucgr.F00712 Eucalyptus grandis HOM05D008051 ORTHO05D009905 1.4e-22 110.5 128 71.9
SGA_v2.0_scaffold196G40891 Striga asiatica HOM05D008051 ORTHO05D009905 1.4e-22 110.5 111 76.6
CANSAT11G0109 Cannabis sativa HOM05D008051 ORTHO05D009905 1.8e-22 110.2 100 56.0
MBI18_g27147_MAGBIO Magnolia biondii HOM05D008051 ORTHO05D009905 4.0e-22 109.0 123 72.4
Cfa020295 Carpinus fangiana HOM05D008051 ORTHO05D009905 6.7e-22 108.2 152 63.2
Ah.04g166050 Amaranthus hybridus HOM05D000120 ORTHO05D002159 8.8e-22 107.8 125 72.8
Sabra11G0071300 Salix brachista HOM05D008051 ORTHO05D009905 8.8e-22 107.8 159 59.7
EL10Ac4g07747 Beta vulgaris HOM05D008051 ORTHO05D009905 2.0e-21 106.7 131 70.2
MSTRG.4127 Avicennia marina HOM05D008051 ORTHO05D009905 2.6e-21 106.3 156 60.9
SGA_v2.0_scaffold196G40892 Striga asiatica HOM05D008051 ORTHO05D009905 3.3e-21 105.9 111 73.9
Glyma.18G093000 Glycine max HOM05D008051 ORTHO05D009905 4.4e-21 105.5 101 51.5
Migut.N00262 Erythranthe guttata HOM05D008051 ORTHO05D009905 5.7e-21 105.1 124 70.2
Gohir.D01G070000 Gossypium hirsutum HOM05D008051 ORTHO05D009905 3.7e-20 102.4 159 57.9
Potri.001G355700 Populus trichocarpa HOM05D008051 ORTHO05D009905 3.7e-20 102.4 124 69.4
Gorai.002G092500 Gossypium raimondii HOM05D008051 ORTHO05D009905 1.1e-19 100.9 159 57.2
HanXRQChr08g0233561 Helianthus annuus HOM05D008051 ORTHO05D009905 1.1e-19 100.9 157 58.6
COL.COLO4_09713 Corchorus olitorius HOM05D008051 ORTHO05D009905 1.8e-19 100.1 135 65.2
PGR083G0962 Punica granatum HOM05D008051 ORTHO05D009905 2.4e-19 99.8 71 57.7
Cpa.g.sc12.286 Carica papaya HOM05D008051 ORTHO05D009905 3.1e-19 99.4 72 54.2
Gohir.A01G083500 Gossypium hirsutum HOM05D008051 ORTHO05D009905 2.0e-18 96.7 157 56.1
Lsat_1_v5_gn_5_3180 Lactuca sativa HOM05D008051 ORTHO05D009905 3.5e-18 95.9 146 63.0
Ciclev10010548m.g Citrus clementina HOM05D008051 ORTHO05D009905 7.7e-18 94.7 102 46.1
Duzib213G0687 Durio zibethinus HOM05D008051 ORTHO05D009905 7.7e-18 94.7 149 60.4
TPR.G33768 Trifolium pratense HOM05D008051 ORTHO05D009905 7.7e-18 94.7 95 50.5
Thecc.07G029800 Theobroma cacao HOM05D008051 ORTHO05D009905 1.3e-17 94.0 135 63.7
CiPaw.11G193500 Carya illinoinensis HOM05D008051 ORTHO05D009905 2.9e-17 92.8 129 60.5
ATR0752G075 Amborella trichopoda HOM05D008051 ORTHO05D009905 3.8e-17 92.4 122 67.2
MD11G1211300 Malus domestica HOM05D008051 ORTHO05D009905 8.5e-17 91.3 111 44.1
Medtr7g074340 Medicago truncatula HOM05D008051 ORTHO05D009905 8.5e-17 91.3 106 43.4
Medtr7g074350 Medicago truncatula HOM05D008051 ORTHO05D009905 8.5e-17 91.3 106 43.4
Medtr7g074360 Medicago truncatula HOM05D008051 ORTHO05D009905 1.5e-16 90.5 106 43.4
TWI39G0594 Tripterygium wilfordii HOM05D008051 ORTHO05D009905 1.9e-16 90.1 127 65.4
Phvul.006G046600 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 2.5e-16 89.7 93 47.3
THA.LOC104798770 Tarenaya hassleriana HOM05D012777 ORTHO05D009905 5.5e-16 88.6 124 58.9
Prupe.4G221300 Prunus persica HOM05D008051 ORTHO05D009905 7.2e-16 88.2 139 61.2
VMungo0540G2374 Vigna mungo HOM05D008051 ORTHO05D009905 7.2e-16 88.2 74 45.9
Manes.15G067600 Manihot esculenta HOM05D008051 ORTHO05D009905 9.4e-16 87.8 100 43.0
Glyma.02G292700 Glycine max HOM05D008051 ORTHO05D009905 3.6e-15 85.9 97 47.4
RcHm_v2.0_Chr5g0041151 Rosa chinensis HOM05D008051 ORTHO05D009905 6.1e-15 85.1 164 56.7
Medtr8g442670 Medicago truncatula HOM05D008051 ORTHO05D009905 8.0e-15 84.7 92 45.7
Sabra11G0072200 Salix brachista HOM05D008051 ORTHO05D009905 1.0e-14 84.3 97 44.3
TPR.G24073 Trifolium pratense HOM05D008051 ORTHO05D009905 1.4e-14 84.0 95 44.2
Glyma.14G021900 Glycine max HOM05D008051 ORTHO05D009905 1.8e-14 83.6 97 46.4
arahy.Tifrunner.gnm1.ann1.QA2XZ5 Arachis hypogaea HOM05D008051 ORTHO05D009905 4.0e-14 82.4 97 42.3
Medtr5g063040 Medicago truncatula HOM05D008051 ORTHO05D009905 4.0e-14 82.4 92 40.2
Psat2g012240 Pisum sativum HOM05D008051 ORTHO05D009905 4.0e-14 82.4 93 36.6
Lalb_Chr15g0081481 Lupinus albus HOM05D008051 ORTHO05D009905 2.0e-13 80.1 91 45.1
Atru.chr2.3503 Acer truncatum HOM05D007124 ORTHO05D008980 2.6e-13 79.7 77 49.4
Medtr7g025060 Medicago truncatula HOM05D008051 ORTHO05D009905 2.6e-13 79.7 91 38.5
Nn1g07253 Nelumbo nucifera HOM05D008051 ORTHO05D009905 2.6e-13 79.7 94 46.8
Lalb_Chr04g0248291 Lupinus albus HOM05D008051 ORTHO05D009905 5.7e-13 78.6 93 41.9
Nn7g36860 Nelumbo nucifera HOM05D008051 ORTHO05D009905 9.8e-13 77.8 96 42.7
Lalb_Chr17g0348611 Lupinus albus HOM05D008051 ORTHO05D009905 1.4e-11 73.9 50 58.0
Medtr5g093370 Medicago truncatula HOM05D008051 ORTHO05D009905 4.1e-11 72.4 90 35.6
LjContig00272g0004425 Lotus japonicus HOM05D008051 ORTHO05D009905 9.1e-11 71.2 96 39.6
TPR.G1175 Trifolium pratense HOM05D008051 ORTHO05D009905 1.2e-10 70.9 48 60.4
Phvul.008G269500 Phaseolus vulgaris HOM05D008051 ORTHO05D009905 1.6e-10 70.5 100 39.0
Cpa.g.sc12.259 Carica papaya HOM05D008051 ORTHO05D009905 2.7e-10 69.7 92 43.5
Medtr5g093340 Medicago truncatula HOM05D008051 ORTHO05D009905 3.5e-10 69.3 90 34.4
Medtr8g442580 Medicago truncatula HOM05D008051 ORTHO05D009905 8.6e-09 64.7 56 50.0
TPR.G1196 Trifolium pratense HOM05D008051 ORTHO05D009905 5.5e-08 62.0 84 36.9
Thhalv10012178m.g Eutrema salsugineum HOM05D012777 ORTHO05D009905 2.1e-07 60.1 99 36.4
AL1G58320 Arabidopsis lyrata HOM05D012777 ORTHO05D009905 3.0e-06 56.2 75 38.7
Carub.0001s3969 Capsella rubella HOM05D012777 ORTHO05D009905 8.8e-06 54.7 101 36.6


User provided reference genes

Program Settings