Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G407.102 Capsicum annuum HOM05D007863 ORTHO05D009265 1.8e-45 185.7 98 100.0
Sopen03g035400 Solanum pennellii HOM05D007863 ORTHO05D009265 7.9e-30 133.7 101 77.2
Solyc03g116510.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 1.5e-28 129.4 101 75.2
Nitab4.5_0001764g0040 Nicotiana tabacum HOM05D007863 ORTHO05D009265 1.6e-22 109.4 111 64.9
Nitab4.5_0010254g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 8.0e-22 107.1 111 64.0
Solyc03g116520.1 Solanum lycopersicum HOM05D007863 ORTHO05D009265 4.8e-19 97.8 91 65.9
Sopen03g035410 Solanum pennellii HOM05D007863 ORTHO05D009265 4.8e-19 97.8 91 64.8
Thecc.06G070300 Theobroma cacao HOM05D007863 ORTHO05D009265 2.7e-14 82.0 96 54.2
Peaxi162Scf00332g00739 Petunia axillaris HOM05D007863 ORTHO05D009265 1.8e-13 79.3 106 50.9
QL05p028236 Quercus lobata HOM05D007863 ORTHO05D009265 1.8e-13 79.3 56 75.0
Hma1.2p1_0515F.1_g170180 Hydrangea macrophylla HOM05D007863 ORTHO05D009265 5.7e-12 74.3 95 49.5
MD17G1207500 Malus domestica HOM05D007863 ORTHO05D009265 7.5e-12 73.9 94 51.1
RcHm_v2.0_Chr2g0136401 Rosa chinensis HOM05D007863 ORTHO05D009265 1.3e-11 73.2 94 46.8
Cpa.g.sc10.233 Carica papaya HOM05D007863 ORTHO05D009265 1.7e-11 72.8 62 71.0
Cfa001994 Carpinus fangiana HOM05D007863 ORTHO05D009265 1.7e-11 72.8 51 74.5
AUR62011544 Chenopodium quinoa HOM05D007863 ORTHO05D009265 1.7e-11 72.8 46 84.8
COL.COLO4_12919 Corchorus olitorius HOM05D007863 ORTHO05D009265 1.7e-11 72.8 99 51.5
CSS0005162 Camellia sinensis var. sinensis HOM05D007863 ORTHO05D009265 2.2e-11 72.4 89 51.7
Gohir.A10G075500 Gossypium hirsutum HOM05D007863 ORTHO05D009265 3.7e-11 71.6 96 49.0
Gohir.D10G076000 Gossypium hirsutum HOM05D007863 ORTHO05D009265 3.7e-11 71.6 96 50.0
Gorai.011G081800 Gossypium raimondii HOM05D007863 ORTHO05D009265 3.7e-11 71.6 96 50.0
FvH4_6g30170 Fragaria vesca HOM05D007863 ORTHO05D009265 8.3e-11 70.5 98 46.9
FAN09G3905 Fragaria x ananassa HOM05D007863 ORTHO05D009265 8.3e-11 70.5 94 48.9
FAN14G0247 Fragaria x ananassa HOM05D007863 ORTHO05D009265 8.3e-11 70.5 98 46.9
FAN05G0465 Fragaria x ananassa HOM05D007863 ORTHO05D009265 1.1e-10 70.1 98 45.9
Prupe.3G082000 Prunus persica HOM05D007863 ORTHO05D009265 1.1e-10 70.1 60 65.0
PGR102G1764 Punica granatum HOM05D007863 ORTHO05D009265 1.1e-10 70.1 50 76.0
Ciclev10027122m.g Citrus clementina HOM05D007863 ORTHO05D009265 1.4e-10 69.7 95 48.4
Rhsim08G0215300 Rhododendron simsii HOM05D007863 ORTHO05D009265 1.4e-10 69.7 47 80.9
Manes.04G115800 Manihot esculenta HOM05D007863 ORTHO05D009265 4.1e-10 68.2 103 45.6
EL10Ac9g21922 Beta vulgaris HOM05D007863 ORTHO05D009265 5.4e-10 67.8 96 46.9
CiPaw.01G245400 Carya illinoinensis HOM05D007863 ORTHO05D009265 5.4e-10 67.8 57 66.7
Migut.I00793 Erythranthe guttata HOM05D007863 ORTHO05D009265 5.4e-10 67.8 46 78.3
arahy.Tifrunner.gnm1.ann1.JQ3RYK Arachis hypogaea HOM05D007863 ORTHO05D009265 9.1e-10 67.0 53 67.9
Haze_16524 Corylus avellana HOM05D007863 ORTHO05D009265 9.1e-10 67.0 58 67.2
Nitab4.5_0009643g0020 Nicotiana tabacum HOM05D007863 ORTHO05D009265 1.6e-09 66.2 88 50.0
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 2.0e-09 65.9 100 45.0
FAN02G1499 Fragaria x ananassa HOM05D007863 ORTHO05D009265 2.7e-09 65.5 94 46.8
Ca_01070_v3 Cicer arietinum L. HOM05D007863 ORTHO05D009265 3.5e-09 65.1 44 72.7
Lalb_Chr14g0373721 Lupinus albus HOM05D007863 ORTHO05D009265 3.5e-09 65.1 52 71.2
Potri.003G062300 Populus trichocarpa HOM05D007863 ORTHO05D009265 4.5e-09 64.7 47 74.5
CANSAT56G0457 Cannabis sativa HOM05D007863 ORTHO05D009265 5.9e-09 64.3 43 76.7
THA.LOC104808229 Tarenaya hassleriana HOM05D007863 ORTHO05D009265 1.7e-08 62.8 44 70.5
Lj3g0006922 Lotus japonicus HOM05D007863 ORTHO05D009265 2.2e-08 62.4 85 51.8
Psat5g301160 Pisum sativum HOM05D007863 ORTHO05D009265 2.2e-08 62.4 88 44.3
Lj3g0003830 Lotus japonicus HOM05D007863 ORTHO05D009265 2.9e-08 62.0 86 46.5
TWI12G0528 Tripterygium wilfordii HOM05D007863 ORTHO05D009265 2.9e-08 62.0 96 45.8
Rhsim12G0192500 Rhododendron simsii HOM05D007863 ORTHO05D009265 5.0e-08 61.2 80 50.0
DCAR_025492 Daucus carota HOM05D007863 ORTHO05D009265 1.9e-07 59.3 110 42.7
Glyma.13G364100 Glycine max HOM05D007863 ORTHO05D009265 1.9e-07 59.3 63 54.0
Manes.11G054000 Manihot esculenta HOM05D007863 ORTHO05D009265 1.9e-07 59.3 101 42.6
Nitab4.5_0003722g0050 Nicotiana tabacum HOM05D007863 ORTHO05D009265 1.9e-07 59.3 75 54.7
Potri.001G171701 Populus trichocarpa HOM05D007863 ORTHO05D009265 2.5e-07 58.9 93 45.2
TPR.G38680 Trifolium pratense HOM05D007863 ORTHO05D009265 3.2e-07 58.5 82 46.3
TPR.G37228 Trifolium pratense HOM05D007863 ORTHO05D009265 4.2e-07 58.2 95 43.2
Medtr2g103440 Medicago truncatula HOM05D007863 ORTHO05D009265 5.5e-07 57.8 67 49.3
Medtr4g011030 Medicago truncatula HOM05D007863 ORTHO05D009265 5.5e-07 57.8 68 54.4
Phvul.005G176000 Phaseolus vulgaris HOM05D007863 ORTHO05D009265 5.5e-07 57.8 71 46.5
Psat7g256040 Pisum sativum HOM05D007863 ORTHO05D009265 9.4e-07 57.0 45 68.9
DCAR_016255 Daucus carota HOM05D007863 ORTHO05D009265 1.2e-06 56.6 65 53.8
Glyma.15G009600 Glycine max HOM05D007863 ORTHO05D009265 1.6e-06 56.2 37 73.0
Migut.D01060 Erythranthe guttata HOM05D007863 ORTHO05D009265 2.1e-06 55.8 39 74.4
Atru.chr1.3052 Acer truncatum HOM05D007863 ORTHO05D009265 2.7e-06 55.5 34 82.4
Lalb_Chr04g0262451 Lupinus albus HOM05D007863 ORTHO05D009265 2.7e-06 55.5 96 41.7
Sabra03G0036200 Salix brachista HOM05D007863 ORTHO05D009265 2.7e-06 55.5 60 58.3
HPP92_024599 Vanilla planifolia HOM05D007863 ORTHO05D009265 3.6e-06 55.1 36 69.4
Lalb_Chr25g0279481 Lupinus albus HOM05D007863 ORTHO05D009265 4.7e-06 54.7 95 42.1
Glyma.07G031800 Glycine max HOM05D007863 ORTHO05D009265 6.1e-06 54.3 78 44.9
Glyma.08G211000 Glycine max HOM05D007863 ORTHO05D009265 6.1e-06 54.3 43 67.4
MBI01_g37813_MAGBIO Magnolia biondii HOM05D007863 ORTHO05D009265 6.1e-06 54.3 44 63.6
ClCG09G002780 Citrullus lanatus HOM05D007863 ORTHO05D009265 8.0e-06 53.9 39 69.2


User provided reference genes

Program Settings