Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G405.1 Capsicum annuum HOM05D002160 ORTHO05D002012 1.2e-30 136.0 76 100.0
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 6.4e-19 97.1 78 76.9
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 2.1e-17 92.0 78 75.6
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 3.5e-17 91.3 78 75.6
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 3.5e-17 91.3 78 75.6
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 3.5e-17 91.3 78 75.6
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.5e-17 91.3 100 62.0
Solyc04g058100.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 4.6e-17 90.9 76 75.0
PGSC0003DMG400030321 Solanum tuberosum HOM05D002160 ORTHO05D002012 1.3e-16 89.4 76 73.7
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 1.7e-16 89.0 78 74.4
Sopen04g025910 Solanum pennellii HOM05D002160 ORTHO05D002012 1.7e-16 89.0 76 73.7
Solyc04g058150.3 Solanum lycopersicum HOM05D002160 ORTHO05D002012 3.0e-16 88.2 76 73.7
Sopen04g026050 Solanum pennellii HOM05D002160 ORTHO05D002012 3.0e-16 88.2 76 73.7
Nitab4.5_0002557g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 5.1e-16 87.4 76 73.7
Sopen06g032540 Solanum pennellii HOM05D002160 ORTHO05D002012 8.6e-16 86.7 79 72.2
Solyc06g076140.4 Solanum lycopersicum HOM05D002160 ORTHO05D002012 1.9e-15 85.5 76 73.7
Peaxi162Scf00774g00011 Petunia axillaris HOM05D002160 ORTHO05D002012 1.2e-14 82.8 78 69.2
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.6e-14 82.4 76 71.1
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.1e-13 79.7 79 68.4
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.1e-13 79.7 79 68.4
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 3.1e-13 78.2 78 69.2
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 8.9e-13 76.6 79 63.3
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.0e-12 75.5 79 60.8
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 9.9e-12 73.2 67 61.2
DCAR_005972 Daucus carota HOM05D002160 ORTHO05D002012 1.3e-11 72.8 119 47.9
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 1.3e-11 72.8 79 63.3
DCAR_018908 Daucus carota HOM05D002160 ORTHO05D002012 1.7e-11 72.4 78 64.1
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 2.2e-11 72.0 78 60.3
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 2.9e-11 71.6 78 62.8
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 2.9e-11 71.6 77 55.8
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 3.8e-11 71.2 78 61.5
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 3.8e-11 71.2 80 67.5
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 4.9e-11 70.9 80 67.5
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 6.4e-11 70.5 77 61.0
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.4e-10 69.3 81 48.1
AL6G11600 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 1.9e-10 68.9 77 62.3
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.4e-10 68.6 78 62.8
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 3.2e-10 68.2 77 55.8
SEGI_13620 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 4.1e-10 67.8 79 62.0
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 5.4e-10 67.4 78 61.5
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 5.4e-10 67.4 78 60.3
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 7.1e-10 67.0 80 61.2
AT5G02380 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 9.2e-10 66.6 77 61.0
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 9.2e-10 66.6 80 56.2
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.6e-09 65.9 78 51.3
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.6e-09 65.9 78 62.8
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 2.7e-09 65.1 75 61.3
Carub.0006s0117 Capsella rubella HOM05D002160 ORTHO05D002012 3.5e-09 64.7 77 58.4
arahy.Tifrunner.gnm1.ann1.FFQQ4A Arachis hypogaea HOM05D002160 ORTHO05D002012 4.6e-09 64.3 79 57.0
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 6.0e-09 63.9 79 57.0
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 7.8e-09 63.5 79 58.2
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 1.0e-08 63.2 80 60.0
CSS0020810 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-08 62.8 74 62.2
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 1.3e-08 62.8 81 55.6
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.3e-08 62.8 79 59.5
Manes.08G079200 Manihot esculenta HOM05D002160 ORTHO05D002012 1.7e-08 62.4 80 56.2
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 1.7e-08 62.4 78 55.1
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 2.3e-08 62.0 81 56.8
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.0e-08 61.6 81 59.3
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 3.0e-08 61.6 79 58.2
CSS0041171 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 3.9e-08 61.2 74 62.2
CiPaw.10G145400 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.9e-08 61.2 77 55.8
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 3.9e-08 61.2 79 57.0
Carub.0003s0850 Capsella rubella HOM05D002160 ORTHO05D002012 5.1e-08 60.8 84 59.5
Eucgr.A01262 Eucalyptus grandis HOM05D002160 ORTHO05D002012 5.1e-08 60.8 80 57.5
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 5.1e-08 60.8 78 53.8
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 5.1e-08 60.8 79 58.2
CARHR083780 Cardamine hirsuta HOM05D002160 ORTHO05D002012 1.5e-07 59.3 81 56.8
Sp6g40100 Schrenkiella parvula HOM05D002160 ORTHO05D002012 1.5e-07 59.3 81 45.7
SEGI_28885 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.5e-07 59.3 78 59.0
AT3G09390 Arabidopsis thaliana HOM05D002160 ORTHO05D002012 1.9e-07 58.9 81 56.8
BcaC05g29516 Brassica carinata HOM05D002160 ORTHO05D002012 1.9e-07 58.9 81 56.8
BcaC05g29670 Brassica carinata HOM05D002160 ORTHO05D002012 1.9e-07 58.9 83 57.8
Oeu011407.1 Olea europaea HOM05D002160 ORTHO05D002012 1.9e-07 58.9 81 55.6
ATR0559G129 Amborella trichopoda HOM05D002160 ORTHO05D002012 3.3e-07 58.2 79 54.4
Thhalv10015167m.g Eutrema salsugineum HOM05D002160 ORTHO05D002012 3.3e-07 58.2 81 44.4
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 4.3e-07 57.8 78 52.6
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 5.6e-07 57.4 78 53.8
PSO151G0128 Papaver somniferum HOM05D002160 ORTHO05D002012 5.6e-07 57.4 70 57.1
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.6e-07 57.4 72 45.8
AL3G20560 Arabidopsis lyrata HOM05D002160 ORTHO05D002012 7.3e-07 57.0 81 55.6
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 7.3e-07 57.0 78 43.6
Aa31LG1G22420 Aethionema arabicum HOM05D002160 ORTHO05D002012 9.6e-07 56.6 83 55.4
Thhalv10022195m.g Eutrema salsugineum HOM05D002160 ORTHO05D002012 9.6e-07 56.6 81 55.6
BolC3t12655H Brassica oleracea HOM05D002160 ORTHO05D002012 1.2e-06 56.2 81 43.2
SEGI_32259 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 1.2e-06 56.2 79 60.8
BcaB01g06159 Brassica carinata HOM05D002160 ORTHO05D002012 1.6e-06 55.8 81 43.2
BcaNung02128 Brassica carinata HOM05D002160 ORTHO05D002012 1.6e-06 55.8 81 43.2
A03p00650 Brassica napus HOM05D002160 ORTHO05D002012 1.6e-06 55.8 81 43.2
BraA03t09455Z Brassica rapa HOM05D002160 ORTHO05D002012 1.6e-06 55.8 81 43.2
PSO339G1421 Papaver somniferum HOM05D002160 ORTHO05D002012 1.6e-06 55.8 70 55.7
PSO339G1859 Papaver somniferum HOM05D002160 ORTHO05D002012 1.6e-06 55.8 70 57.1
BcaC06g31984 Brassica carinata HOM05D002160 ORTHO05D002012 4.7e-06 54.3 81 42.0
CSS0041767 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 6.2e-06 53.9 73 53.4
SEGI_27338 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 6.2e-06 53.9 78 57.7
SEGI_31010 Sequoiadendron giganteum HOM05D002160 ORTHO05D002012 6.2e-06 53.9 78 57.7
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 8.1e-06 53.5 77 55.8
Sp3g07770 Schrenkiella parvula HOM05D002160 ORTHO05D002012 8.1e-06 53.5 81 54.3


User provided reference genes

Program Settings