Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 2.3e-199 698.7 357 100.0
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 1.4e-95 354.0 302 67.2
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 5.2e-95 352.1 302 67.2
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 3.2e-89 332.8 301 64.8
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 1.2e-88 330.9 261 72.8
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 7.0e-84 315.1 302 60.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.2e-80 304.3 321 58.9
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 3.6e-80 302.8 304 57.6
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 6.1e-80 302.0 304 57.6
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 1.2e-78 297.7 304 56.2
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 7.5e-78 295.0 304 55.6
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 1.7e-77 293.9 302 57.9
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.6e-75 287.3 304 55.6
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.6e-75 287.3 305 54.8
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 2.0e-75 287.0 342 51.8
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 2.7e-75 286.6 303 55.4
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 1.0e-74 284.6 303 54.8
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.6e-74 282.0 304 54.6
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 1.9e-73 280.4 303 54.8
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 1.9e-73 280.4 302 54.6
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.9e-73 280.4 303 54.1
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 4.3e-73 279.3 302 55.6
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 5.6e-73 278.9 303 54.1
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 5.6e-73 278.9 364 50.8
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 9.5e-73 278.1 303 53.8
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 1.2e-72 277.7 329 52.6
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 1.2e-72 277.7 304 53.3
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.2e-72 277.7 316 52.5
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 1.6e-72 277.3 303 54.1
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 1.6e-72 277.3 303 54.1
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 1.6e-72 277.3 303 54.1
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 2.1e-72 276.9 304 53.3
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 3.6e-72 276.2 302 55.6
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 3.6e-72 276.2 304 53.3
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 3.6e-72 276.2 303 53.1
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 6.2e-72 275.4 303 53.8
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 6.2e-72 275.4 300 53.3
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 1.4e-71 274.2 317 50.8
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 1.4e-71 274.2 304 54.6
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 1.8e-71 273.9 304 53.3
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 2.3e-71 273.5 302 53.6
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 2.3e-71 273.5 317 49.8
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 2.3e-71 273.5 302 54.0
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 1.2e-70 271.2 302 52.6
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 2.6e-70 270.0 301 52.5
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 3.4e-70 269.6 319 51.7
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 4.4e-70 269.2 302 53.6
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.3e-69 267.7 295 53.2
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 1.7e-69 267.3 303 52.5
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 2.2e-69 266.9 304 51.3
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 2.2e-69 266.9 304 53.6
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 2.9e-69 266.5 295 53.2
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 1.1e-68 264.6 303 52.8
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 1.1e-68 264.6 239 63.6
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 1.4e-68 264.2 306 52.9
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.9e-68 263.8 355 49.9
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 5.4e-68 262.3 314 49.4
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 7.0e-68 261.9 302 50.7
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 3.5e-67 259.6 303 51.5
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 6.0e-67 258.8 303 50.5
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 6.6e-66 255.4 304 50.3
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 1.5e-65 254.2 302 51.3
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 1.9e-65 253.8 304 50.0
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 2.5e-65 253.4 304 50.0
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.3e-65 252.7 303 49.5
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 5.6e-65 252.3 308 50.0
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.6e-64 250.8 304 49.3
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 2.8e-64 250.0 303 48.8
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 3.6e-64 249.6 302 50.7
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 3.6e-64 249.6 304 51.0
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 6.2e-64 248.8 316 50.3
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.1e-63 248.1 303 48.8
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 1.4e-63 247.7 306 51.0
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 1.4e-63 247.7 348 46.6
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 1.8e-63 247.3 304 50.0
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 3.1e-63 246.5 303 50.8
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 4.0e-63 246.1 316 50.0
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 4.0e-63 246.1 298 50.0
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 4.0e-63 246.1 285 51.2
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 8.9e-63 245.0 304 49.7
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 3.4e-62 243.0 303 49.8
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 4.4e-62 242.7 304 49.0
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 7.5e-62 241.9 304 49.0
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 7.5e-62 241.9 383 42.8
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 1.7e-61 240.7 317 47.6
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 2.2e-61 240.4 255 57.6
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 2.9e-61 240.0 329 46.8
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.9e-60 237.3 308 49.7
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 2.4e-60 236.9 304 49.0
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 4.1e-60 236.1 316 48.4
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 4.1e-60 236.1 303 47.9
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 9.2e-60 235.0 239 56.1
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.2e-59 234.6 303 47.5
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 7.8e-59 231.9 239 56.5
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 2.3e-58 230.3 252 53.2
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 2.3e-58 230.3 251 53.0
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 3.0e-58 229.9 302 50.0
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 8.6e-58 228.4 266 51.9
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 1.9e-57 227.3 266 51.5
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 2.8e-56 223.4 236 56.4
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 5.2e-55 219.2 254 53.5
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 8.9e-55 218.4 254 53.1
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 1.3e-53 214.5 239 54.4
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 2.9e-53 213.4 304 41.4
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 3.5e-51 206.5 266 48.1
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 7.8e-51 205.3 240 52.9
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 3.0e-50 203.4 211 60.2
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.1e-49 201.4 183 61.7
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 4.7e-48 196.1 278 47.5
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 2.4e-47 193.7 272 50.4
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 1.2e-46 191.4 206 53.9
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 1.2e-46 191.4 215 53.5
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 1.3e-45 188.0 183 56.8
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 4.9e-45 186.0 303 41.6
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 6.4e-45 185.7 187 54.5
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 2.4e-44 183.7 200 54.0
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 2.7e-43 180.3 234 49.1
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 7.8e-43 178.7 334 40.4
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 3.9e-42 176.4 399 37.1
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 5.1e-42 176.0 213 50.7
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 5.4e-36 156.0 310 34.2
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 1.8e-31 141.0 245 38.4
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.5e-30 137.9 138 56.5
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 1.5e-30 137.9 242 36.8
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 5.5e-28 129.4 167 49.1
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 2.1e-27 127.5 129 58.1
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 3.3e-25 120.2 78 80.8
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 2.8e-24 117.1 131 50.4
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.8e-23 114.4 73 80.8
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 4.5e-22 109.8 181 39.8
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 1.7e-21 107.8 73 76.7
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 4.9e-21 106.3 136 52.9
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 6.9e-15 85.9 53 81.1
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 4.5e-14 83.2 52 80.8
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 1.0e-13 82.0 246 27.6
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 1.1e-12 78.6 50 76.0
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 3.2e-12 77.0 73 57.5
CAN.G2458.1 Capsicum annuum HOM05D002335 ORTHO05D006282 4.2e-12 76.6 73 65.8
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 1.2e-11 75.1 59 64.4
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.1e-11 74.3 73 60.3
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 5.7e-09 66.2 73 53.4
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 1.5e-06 58.2 73 46.6
FvH4_1g08700 Fragaria vesca HOM05D000069 ORTHO05D021424 2.0e-06 57.8 44 65.9
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 5.9e-06 56.2 194 27.8


User provided reference genes

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